ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl30a12 |
|---|---|
| Clone Library Name | barley_pub |
>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC| 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben resistant protein 1) (Ath-B) Length = 1065 Score = 191 bits (485), Expect = 4e-49 Identities = 88/97 (90%), Positives = 94/97 (96%) Frame = -2 Query: 381 TILIINLVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIV 202 T+LI+NLVGVVAG SYAINSGYQSWGPLFGKLFFAFWVI+HLYPFLKGLMGRQNRTPTIV Sbjct: 969 TLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIV 1028 Query: 201 VVWAILLASIFSLLWVRIDPFTTRVTGPDIQMCGINC 91 VVW++LLASIFSLLWVRIDPFT+RVTGPDI CGINC Sbjct: 1029 VVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 1065
>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC| 2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3) Length = 1026 Score = 176 bits (445), Expect = 2e-44 Identities = 79/97 (81%), Positives = 88/97 (90%) Frame = -2 Query: 381 TILIINLVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIV 202 T+LIIN+VGVVAG S AIN+GYQSWGPLFGKLFF+FWVI+HLYPFLKGLMGRQNRTPTIV Sbjct: 930 TVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIV 989 Query: 201 VVWAILLASIFSLLWVRIDPFTTRVTGPDIQMCGINC 91 V+W++LLASIFSLLWVRIDPF + GPD CGINC Sbjct: 990 VIWSVLLASIFSLLWVRIDPFVLKTKGPDTSKCGINC 1026
>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC| 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) Length = 1049 Score = 168 bits (425), Expect = 3e-42 Identities = 75/97 (77%), Positives = 89/97 (91%) Frame = -2 Query: 381 TILIINLVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIV 202 T++I+N+VGVVAG S AIN+GY SWGPLFGKLFFAFWVI+HLYPFLKGLMGRQNRTPTIV Sbjct: 953 TLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIV 1012 Query: 201 VVWAILLASIFSLLWVRIDPFTTRVTGPDIQMCGINC 91 V+W+ILLASIFSL+WVRIDPF + TGP ++ CG++C Sbjct: 1013 VLWSILLASIFSLVWVRIDPFLPKQTGPLLKQCGVDC 1049
>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC| 2.4.1.12) (AtCesA-1) (Radially swollen protein 1) (AtRSW1) Length = 1081 Score = 154 bits (389), Expect = 5e-38 Identities = 67/81 (82%), Positives = 78/81 (96%) Frame = -2 Query: 381 TILIINLVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIV 202 T+L++NL+G+VAG SYA+NSGYQSWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV Sbjct: 984 TVLLVNLIGIVAGVSYAVNSGYQSWGPLFGKLFFALWVIAHLYPFLKGLLGRQNRTPTIV 1043 Query: 201 VVWAILLASIFSLLWVRIDPF 139 +VW++LLASIFSLLWVRI+PF Sbjct: 1044 IVWSVLLASIFSLLWVRINPF 1064
>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10| [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13) Length = 1065 Score = 151 bits (382), Expect = 3e-37 Identities = 68/83 (81%), Positives = 77/83 (92%) Frame = -2 Query: 381 TILIINLVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIV 202 TIL++NLVG+VAG SYAINSGYQSWGPL GKL FAFWV+ HLYPFLKGL+GRQNRTPTIV Sbjct: 971 TILLVNLVGIVAGVSYAINSGYQSWGPLMGKLLFAFWVVAHLYPFLKGLLGRQNRTPTIV 1030 Query: 201 VVWAILLASIFSLLWVRIDPFTT 133 +VW+ LLASIFSLLWVRI+PF + Sbjct: 1031 IVWSALLASIFSLLWVRINPFVS 1053
>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC| 2.4.1.12) (AtCesA-8) (Irregular xylem protein 1) (AtIRX1) Length = 985 Score = 149 bits (377), Expect = 1e-36 Identities = 68/97 (70%), Positives = 84/97 (86%) Frame = -2 Query: 381 TILIINLVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIV 202 ++LIINLVGVVAG S A+N GY++WGPLFGK+FFAFWVI+HLYPFLKGLMGRQNRTPTIV Sbjct: 887 SLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIV 946 Query: 201 VVWAILLASIFSLLWVRIDPFTTRVTGPDIQMCGINC 91 ++W+ILLAS+FSL+WVRI+PF ++ D +NC Sbjct: 947 ILWSILLASVFSLVWVRINPFVSKT---DTTSLSLNC 980
>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9| [UDP-forming] (EC 2.4.1.12) (AtCesA-9) Length = 1088 Score = 149 bits (377), Expect = 1e-36 Identities = 64/97 (65%), Positives = 86/97 (88%) Frame = -2 Query: 381 TILIINLVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIV 202 T+LIIN+VGV+ G S AIN+GY SWGPLFG+LFFA WVI+HLYPFLKGL+G+Q+R PTI+ Sbjct: 991 TLLIINIVGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQDRVPTII 1050 Query: 201 VVWAILLASIFSLLWVRIDPFTTRVTGPDIQMCGINC 91 +VW+ILLASI +LLWVR++PF ++ GP +++CG++C Sbjct: 1051 LVWSILLASILTLLWVRVNPFVSK-DGPVLEICGLDC 1086
>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC| 2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2) (Protein PROCUSTE1) (Protein Quill) (AraxCelA) Length = 1084 Score = 147 bits (371), Expect = 6e-36 Identities = 64/97 (65%), Positives = 85/97 (87%) Frame = -2 Query: 381 TILIINLVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIV 202 T+LIIN++GV+ G S AI++GY SWGPLFG+LFFA WVIIHLYPFLKGL+G+Q+R PTI+ Sbjct: 988 TLLIINVIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTII 1047 Query: 201 VVWAILLASIFSLLWVRIDPFTTRVTGPDIQMCGINC 91 VVW+ILLASI +LLWVR++PF + GP +++CG++C Sbjct: 1048 VVWSILLASILTLLWVRVNPFVAK-GGPILEICGLDC 1083
>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC| 2.4.1.12) (AtCesA-2) (Ath-A) Length = 1084 Score = 147 bits (371), Expect = 6e-36 Identities = 62/97 (63%), Positives = 85/97 (87%) Frame = -2 Query: 381 TILIINLVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIV 202 T+LIIN++GV+ G S AI++GY SWGPLFG+LFFA WVI+HLYPFLKG++G+Q++ PTI+ Sbjct: 987 TLLIINIIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIVHLYPFLKGMLGKQDKMPTII 1046 Query: 201 VVWAILLASIFSLLWVRIDPFTTRVTGPDIQMCGINC 91 VVW+ILLASI +LLWVR++PF + GP +++CG+NC Sbjct: 1047 VVWSILLASILTLLWVRVNPFVAK-GGPVLEICGLNC 1082
>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC| 2.4.1.12) (AtCesA-5) Length = 1069 Score = 147 bits (371), Expect = 6e-36 Identities = 63/97 (64%), Positives = 86/97 (88%) Frame = -2 Query: 381 TILIINLVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIV 202 T+LIIN++GV+ G S AI++GY SWGPLFG+LFFAFWVI+HLYPFLKGL+G+Q+R PTI+ Sbjct: 973 TLLIINVIGVIVGISDAISNGYDSWGPLFGRLFFAFWVILHLYPFLKGLLGKQDRMPTII 1032 Query: 201 VVWAILLASIFSLLWVRIDPFTTRVTGPDIQMCGINC 91 +VW+ILLASI +LLWVR++PF + GP +++CG++C Sbjct: 1033 LVWSILLASILTLLWVRVNPFVAK-GGPILEICGLDC 1068
>Y5760_STRCO (O86820) Putative DNA glycosylase SCO5760 (EC 3.2.2.-) (Putative| DNA-(apurinic or apyrimidinic site) lyase SCO5760) (EC 4.2.99.18) (Putative AP lyase SCO5760) Length = 275 Score = 32.7 bits (73), Expect = 0.22 Identities = 27/79 (34%), Positives = 36/79 (45%) Frame = -1 Query: 364 PCRCCGWYLLRDQQRLSVMGTAFREALLCLLGDYPLVPIPQGANGTAEPHADHRCRLGHP 185 P R G LL DQ+ L+ +G ++ L LLG P +P+ E AD RL P Sbjct: 145 PPRALGEALL-DQRNLAGIGNVYKSELCFLLGVTPWLPV-------GELPADRAARL--P 194 Query: 184 SCIHLLLAVGSHRPVHHTS 128 + LL RPV T+ Sbjct: 195 TLAKKLLEANRDRPVRRTT 213
>ACKA_DEIRA (Q9RR92) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 398 Score = 31.6 bits (70), Expect = 0.49 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = +2 Query: 143 GSMRTHSKEKMDARRMAQTTTMVGVRFCRPISPLRNGYKWIITQKAKKSFPKSGPH 310 G H E+ A + + VR C P++PL N + + A+++FPK PH Sbjct: 83 GHRVVHGGERFSAPVLVTPEVLEAVRACVPLAPLHNPANIVGIEAAQQAFPKL-PH 137
>Y2025_ARCFU (O28254) Hypothetical protein AF2025| Length = 181 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/58 (24%), Positives = 30/58 (51%) Frame = -2 Query: 300 LFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRV 127 LFG L +I L F++G++ +++ +W ++ A ++ LL + + TR+ Sbjct: 35 LFGFLALVLLNVIRLEEFMRGIVA----IVSLIAIWVLMTAGVYILLSMPLPELPTRI 88
>DNAE2_PSEF5 (Q4KAD4) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 1034 Score = 29.6 bits (65), Expect = 1.8 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = +3 Query: 132 VW*TGRCEPTARRRWMQEGWPRR 200 +W TG EP A+ RW+Q+ +P+R Sbjct: 122 LWLTGAGEPLAQGRWLQQVFPQR 144
>YNR6_YEAST (P53882) Hypothetical 67.4 kDa protein in RPS3-PSD1 intergenic| region Length = 636 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/69 (26%), Positives = 37/69 (53%) Frame = -3 Query: 254 THSSRG*WDGRTARRPSLSSGPSFLHPSSPCCGFASTRSPHESLGQISKCVASTARSVQN 75 T+SS+ +D T+ ++ S +SP +S S SL + ++S+A S+ + Sbjct: 102 TYSSQ--YDPATSSYSIITPSMSIFSSTSPMSSSSSITSEWSSLTSTTPTLSSSATSLSS 159 Query: 74 NWNSIATHS 48 +W+S+++ S Sbjct: 160 SWSSLSSPS 168
>CTTB2_HUMAN (Q8WZ74) Cortactin-binding protein 2 (CortBP2)| Length = 1663 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -1 Query: 202 CRLGHPSCIHLLLAVGSHRPVHHTSHW 122 C+ G+ CI LLL G++R V T W Sbjct: 818 CKNGNKECIKLLLEAGTNRSVKTTDGW 844
>FTHS_CLOAB (Q97EB3) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 556 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Frame = -1 Query: 274 LGDYPLVPIPQGANGTAEPHADHRCRLG--HPSCIHLLLAVGSHRPVHH 134 LGDY + GA+ AE D +CR G +P C+ L+ + + + HH Sbjct: 291 LGDYVITEAGFGADLGAEKFLDIKCRYGNLNPDCVVLVATIRALK--HH 337
>ACKA1_PHOPR (Q6LNF6) Acetate kinase 1 (EC 2.7.2.1) (Acetokinase 1)| Length = 398 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/51 (29%), Positives = 23/51 (45%) Frame = +2 Query: 143 GSMRTHSKEKMDARRMAQTTTMVGVRFCRPISPLRNGYKWIITQKAKKSFP 295 G H EK + T + G+ C ++PL N I + A+K+FP Sbjct: 87 GHRVVHGGEKFTQSVLIDETVVKGIEDCSALAPLHNPAHIIGIKAAQKAFP 137
>VG7_SPV4 (P11339) Gene 7 protein| Length = 48 Score = 28.9 bits (63), Expect = 3.2 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = -2 Query: 207 IVVVWAILLASIFSLLW 157 +VVVW ILL+ +F LLW Sbjct: 19 LVVVWIILLSEVFVLLW 35
>CAD_DROME (P09085) Homeotic protein caudal| Length = 427 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = -3 Query: 209 PSLSSGPSFLHPSSPCCGFASTRSPHESLGQISKCVASTARSVQNNWNSIATHS 48 P SG P +P S SPH L VA+ + NN NS +TH+ Sbjct: 182 PITVSGSEISSPGAP----TSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHN 231
>TOM1_NEUCR (Q9P4Z1) E3 ubiquitin protein ligase TOM1-like protein (EC 6.3.2.-)| Length = 4065 Score = 28.9 bits (63), Expect = 3.2 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +1 Query: 148 DANPQQGEDGCKKDGPDDNDGRRAVLPSH*PLEEWVQVD-NHPEGKEELPEKRSP*LIAA 324 DA+ +DG D D+DG+ A P H P +E ++ + P LP S +I Sbjct: 770 DADDDSEDDGSAHDAAPDSDGQAATQP-HPPTQEMLEAPRDFPPAHGILPSSESMNIIPT 828 Query: 325 V 327 V Sbjct: 829 V 829
>CTTB2_CALJA (Q2QLF8) Cortactin-binding protein 2 (CortBP2)| Length = 1662 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -1 Query: 202 CRLGHPSCIHLLLAVGSHRPVHHTSHW 122 C+ G+ CI LLL G+ R V T W Sbjct: 817 CKNGNKECIRLLLEAGTDRSVKTTDGW 843
>ACKA_PHOLL (Q7N2I1) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 400 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/51 (31%), Positives = 22/51 (43%) Frame = +2 Query: 143 GSMRTHSKEKMDARRMAQTTTMVGVRFCRPISPLRNGYKWIITQKAKKSFP 295 G H EK A + G++ P +PL N I ++AKK FP Sbjct: 89 GHRIVHGGEKFTASVTINDEVIQGIKDAVPFAPLHNPAHLIGIEEAKKGFP 139
>YA00_PYRHO (O58728) Hypothetical UPF0118 protein PH1000| Length = 355 Score = 28.1 bits (61), Expect = 5.4 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 3/76 (3%) Frame = -2 Query: 378 ILIINLVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIIHLYPF---LKGLMGRQNRTPT 208 I+II LV + T P F LFFAF LYP LK +G +N Sbjct: 37 IIIITLVALAIKTIL----------PFFSPLFFAFITAYALYPLHIKLKERIGSKN--SA 84 Query: 207 IVVVWAILLASIFSLL 160 I++ +LL ++ LL Sbjct: 85 ILLTLFLLLGALMILL 100
>C2TA_MOUSE (P79621) MHC class II transactivator (CIITA)| Length = 1155 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 4/36 (11%) Frame = -1 Query: 136 HTSHWARYPNVW----HQLLGACKIIGTQLPPILLY 41 H +H + P +W HQL G +GT+L P +Y Sbjct: 836 HCAHETQQPGIWEHVAHQLPGHLSFLGTRLTPPDVY 871
>RPN8_NEUCR (Q8WZY4) 26S proteasome regulatory subunit rpn-8| Length = 352 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +1 Query: 139 ERVDANPQQGEDGCKKDGPDDNDGRRAVLPSH*PLEEWVQVDNHPEGKEE 288 E DA ++GE+G KK+G D +G A E + +N P+ K++ Sbjct: 308 EENDAKKKEGENGEKKEGADKKEGSPAAANG-----ESKEKENSPKEKKK 352
>ABEC1_RAT (P38483) Apolipoprotein B mRNA-editing enzyme (EC 3.5.4.-)| (APOBEC-1) (REPR) Length = 229 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 3/31 (9%) Frame = -1 Query: 130 SHWARYPNVWHQLLGA---CKIIGTQLPPIL 47 +HW RYP++W +L C I+G LPP L Sbjct: 165 AHWPRYPHLWVRLYVLELYCIILG--LPPCL 193
>PERL_BOVIN (P80025) Lactoperoxidase precursor (EC 1.11.1.7) (LPO)| Length = 712 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 7/52 (13%) Frame = -2 Query: 351 VAGTSYAINSGYQSWGP----LFGKLFFAFWVIIH---LYPFLKGLMGRQNR 217 V T ++ YQ WGP LFF W II + P ++GL+ ++++ Sbjct: 471 VPSTVSRLDENYQPWGPEAELPLHTLFFNTWRIIKDGGIDPLVRGLLAKKSK 522
>CTTB2_CALMO (Q2QLB3) Cortactin-binding protein 2 (CortBP2)| Length = 1663 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -1 Query: 202 CRLGHPSCIHLLLAVGSHRPVHHTSHW 122 C+ G+ CI LLL G+ R V T W Sbjct: 818 CKNGNKECIKLLLEAGTDRCVKTTDGW 844
>TRHY_SHEEP (P22793) Trichohyalin| Length = 1549 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +3 Query: 276 RQRRASRKAVPMTDSRC*SRRRYQPQHRQ 362 ++ + RK P+ D R +RR++PQ RQ Sbjct: 98 KEAKCERKGNPLQDRRREDQRRFEPQDRQ 126
>NIR_EMENI (P22944) Nitrite reductase [NAD(P)H] (EC 1.7.1.4)| Length = 1104 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -3 Query: 155 FASTRSPHESLGQISKCVASTARSVQNNWNSIAT 54 + S R+PH+ G +S CV A + ++ IAT Sbjct: 744 YKSIRAPHKFKGAVSGCVRECAEAQNKDFGLIAT 777
>PPARB_MOUSE (P35396) Peroxisome proliferator-activated receptor delta| (PPAR-delta) (PPAR-beta) (Nuclear hormone receptor 1) (NUC1) Length = 440 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/32 (37%), Positives = 15/32 (46%) Frame = -3 Query: 209 PSLSSGPSFLHPSSPCCGFASTRSPHESLGQI 114 P L+ GP PSS C + SP L Q+ Sbjct: 26 PELNGGPEHTLPSSSCADLSQNSSPSSLLDQL 57
>Y242_HELPJ (Q9ZMH8) Hypothetical zinc metalloprotease jhp_0242 (EC 3.4.24.-)| Length = 350 Score = 27.7 bits (60), Expect = 7.0 Identities = 19/48 (39%), Positives = 23/48 (47%) Frame = -2 Query: 348 AGTSYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTI 205 A SYA S +Q LFG FF F + +Y FL L G + P I Sbjct: 81 ANDSYAQKSPFQKLWILFGGAFFNFLFAVLVYFFL-ALSGEKVLLPVI 127
>MOT8_HUMAN (P36021) Monocarboxylate transporter 8 (MCT 8) (X-linked| PEST-containing transporter) (MCT 7) Length = 613 Score = 27.3 bits (59), Expect = 9.2 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +3 Query: 219 GSAVPLAP*GMGTSG*SPRRQRRASRKAVPMTDSRC*SRRRYQPQ 353 GS L+ G+ + G P S + P + S C SR +YQPQ Sbjct: 16 GSRDRLSRDGLASWGAEPGGGGSGSGSSSPPSSSSCSSRNKYQPQ 60
>NPW_HUMAN (Q8N729) Neuropeptide W precursor (Preproprotein L8) (hPPL8)| [Contains: Neuropeptide W-23 (NPW23) (hL8); Neuropeptide W-30 (NPW30) (hL8C)] Length = 165 Score = 27.3 bits (59), Expect = 9.2 Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 17/74 (22%) Frame = +3 Query: 153 EPTARRR------WMQEGWPRRQRWSACGSAV-----------PLAP*GMGTSG*SPRRQ 281 EP AR W+QE W R+R S G V L P + SG R + Sbjct: 81 EPAAREAPLLLPSWVQELWETRRRSSQAGIPVRAPRSPRAPEPALEPESLDFSGAGQRLR 140 Query: 282 RRASRKAVPMTDSR 323 R SR AV +R Sbjct: 141 RDVSRPAVDPAANR 154
>C1QT7_MOUSE (Q8BVD7) Complement C1q tumor necrosis factor-related protein 7| precursor Length = 289 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = -1 Query: 307 GTAFREALLCLLGDYPLVPIPQGANGTAEPHADHRCRLGHP 185 G ++ +C + P P P GANG+ PH R+G P Sbjct: 25 GESYSPRYICSIPGLPGPPGPPGANGSPGPHG----RIGLP 61 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,071,099 Number of Sequences: 219361 Number of extensions: 1441282 Number of successful extensions: 4103 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3984 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4098 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 1396778976 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
