>BMR1A_HUMAN (P36894) Bone morphogenetic protein receptor type IA precursor (EC|
           2.7.11.30) (Serine/threonine-protein kinase receptor R5)
           (SKR5) (Activin receptor-like kinase 3) (ALK-3) (CD292
           antigen)
          Length = 532

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
 Frame = -1

Query: 114 WQVIKISWCCCFLSRVLFLSC----HYKCTSVQDKKRF 13
           W V+ IS   C ++ ++F SC    HY C S+  ++R+
Sbjct: 153 WLVLLISMAVCIIAMIIFSSCFCYKHY-CKSISSRRRY 189

>W_HENDV (P0C1C6) Protein W|
          Length = 448

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 179 PSSETERFMTWHVLQRHDGTTE-TPHTKEGPNNP 277
           PSS  ER  ++H+   HDG     P TK  PN P
Sbjct: 128 PSSSPERGWSYHMSGTHDGNVRAVPDTKVLPNAP 161

>BMR1A_MOUSE (P36895) Bone morphogenetic protein receptor type IA precursor (EC|
           2.7.11.30) (Serine/threonine-protein kinase receptor R5)
           (SKR5) (Activin receptor-like kinase 3) (ALK-3)
           (BMP-2/BMP-4 receptor)
          Length = 532

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = -1

Query: 114 WQVIKISWCCCFLSRVLFLSC----HYKCTSVQDKKRF 13
           W V+ IS   C ++ ++F SC    HY C S+  + R+
Sbjct: 153 WLVVLISMAVCIVAMIIFSSCFCYKHY-CKSISSRGRY 189

>V_HENDV (O55777) Nonstructural protein V|
          Length = 457

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 179 PSSETERFMTWHVLQRHDGTTE-TPHTKEGPNNP 277
           PSS  ER  ++H+   HDG     P TK  PN P
Sbjct: 128 PSSSPERGWSYHMSGTHDGNVRAVPDTKVLPNAP 161

>PHOSP_HENDV (O55778) Phosphoprotein (Protein P)|
          Length = 707

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 179 PSSETERFMTWHVLQRHDGTTE-TPHTKEGPNNP 277
           PSS  ER  ++H+   HDG     P TK  PN P
Sbjct: 128 PSSSPERGWSYHMSGTHDGNVRAVPDTKVLPNAP 161

>DUT_HHV6U (Q06095) Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC|
           3.6.1.23) (dUTPase) (dUTP pyrophosphatase)
          Length = 376

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 18/61 (29%), Positives = 31/61 (50%)
 Frame = -3

Query: 406 SKLVKMLGLILK*MFILQADTVLCSHPKLFDEPEASCRVVTEIWIVRAFFCMWSFCCAVV 227
           SK +  LGL+++  +I   DT+     K+F+    +  + T I I R  F    FC +++
Sbjct: 293 SKEIAKLGLLIE-TYIWNKDTI--PSIKIFNSTRKTIYIPTGICIARIIFTCGHFCLSLM 349

Query: 226 P 224
           P
Sbjct: 350 P 350

>DUT_HHV6G (P30007) Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC|
           3.6.1.23) (dUTPase) (dUTP pyrophosphatase)
          Length = 376

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 18/61 (29%), Positives = 31/61 (50%)
 Frame = -3

Query: 406 SKLVKMLGLILK*MFILQADTVLCSHPKLFDEPEASCRVVTEIWIVRAFFCMWSFCCAVV 227
           SK +  LGL+++  +I   DT+     K+F+    +  + T I I R  F    FC +++
Sbjct: 293 SKEIAKLGLLIE-TYIWNKDTI--PSIKIFNSTRKTIYIPTGICIARIIFTCGHFCLSLM 349

Query: 226 P 224
           P
Sbjct: 350 P 350

>CCMA_YERPE (Q8ZD58) Cytochrome c biogenesis ATP-binding export protein ccmA|
           (EC 3.6.3.41) (Heme exporter protein A)
          Length = 218

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 50  WHDRNNTRDRKQQHQEILMTCQSPPI 127
           W D+N  RDR + HQ++L     P I
Sbjct: 60  WRDKNIRRDRAKYHQDLLFLGHQPGI 85

>RSMC_BUCBP (Q89AI2) Ribosomal RNA small subunit methyltransferase C (EC|
           2.1.1.52) (rRNA (guanine-N(2)-)-methyltransferase) (16S
           rRNA m2G1207 methyltransferase)
          Length = 326

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -3

Query: 232 VVPLKNMPCHKSF 194
           +V LKN+PCHKSF
Sbjct: 287 IVTLKNVPCHKSF 299

>SNAI_DROME (P08044) Protein snail|
          Length = 390

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +1

Query: 103 NDLPISSYLHLFTAA--NLSGTQGSSETVFRNRTIYDMACSSEARRHNRNSTYK 258
           ND+P+ +  HLF  A  + SG   SS + +        + +S A  H +N  +K
Sbjct: 193 NDIPLPALFHLFDEAKSSSSGASVSSSSGYSYTPAMSASSASVAANHAKNYRFK 246


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,732,241
Number of Sequences: 219361
Number of extensions: 1146863
Number of successful extensions: 2729
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2729
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)