>SYC1_MYCTU (P0A634) Cysteinyl-tRNA synthetase 1 (EC 6.1.1.16) (Cysteine--tRNA|
           ligase 1) (CysRS 1)
          Length = 469

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
 Frame = +1

Query: 316 KKAAEGRSWWPWLAVHGHSYAIRKDI-----ATTEVRSSSHQQQRV 438
           K AA GR WW W A H  ++    D       + E R++ H  Q +
Sbjct: 82  KAAAAGRPWWEWAATHERAFTAAYDALDVLPPSAEPRATGHITQMI 127

>SYC1_MYCBO (P0A635) Cysteinyl-tRNA synthetase 1 (EC 6.1.1.16) (Cysteine--tRNA|
           ligase 1) (CysRS 1)
          Length = 469

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
 Frame = +1

Query: 316 KKAAEGRSWWPWLAVHGHSYAIRKDI-----ATTEVRSSSHQQQRV 438
           K AA GR WW W A H  ++    D       + E R++ H  Q +
Sbjct: 82  KAAAAGRPWWEWAATHERAFTAAYDALDVLPPSAEPRATGHITQMI 127

>SYC1_MYCLE (P57990) Cysteinyl-tRNA synthetase 1 (EC 6.1.1.16) (Cysteine--tRNA|
           ligase 1) (CysRS 1)
          Length = 473

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
 Frame = +1

Query: 316 KKAAEGRSWWPWLAVHGHSYAIRKDI-----ATTEVRSSSHQQQRV 438
           K AA GR WW W A H  ++    D       + E R++ H  Q +
Sbjct: 82  KAAAAGRPWWEWAATHERAFTAAYDALDVLPPSAEPRATGHITQMI 127

>SYC1_MYCPA (Q743W3) Cysteinyl-tRNA synthetase 1 (EC 6.1.1.16) (Cysteine--tRNA|
           ligase 1) (CysRS 1)
          Length = 468

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
 Frame = +1

Query: 316 KKAAEGRSWWPWLAVHGHSYAIRKDI-----ATTEVRSSSHQQQRV 438
           K AA GR WW W A +  +++   D       + E R++ H  Q V
Sbjct: 82  KAAAAGRPWWEWAATYERAFSAAYDALDVLPPSAEPRATGHITQMV 127

>YBL2_STRCI (P33654) Hypothetical 14.2 kDa protein in blaB 3'region|
          Length = 132

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 334 RSWWPWLAVHGHSYAIRKDIATTEVR 411
           RSWW   A+HGH+  IR   +TT  R
Sbjct: 101 RSWWVRRALHGHARRIRSMTSTTSSR 126

>LEF5_GVCL (P41727) Late expression factor 5 homolog|
          Length = 240

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 17/56 (30%), Positives = 31/56 (55%)
 Frame = +3

Query: 117 VRSQNIDSPPLFTPRRQLIQDAYLLHGSIRWVNSLSQTLTRL*AQTTKCTKSQYNM 284
           ++++N DS P    +  +  D+ L   SI W NSL++  +   + TTK ++ + NM
Sbjct: 130 LKNKNFDSKPCKLKKEPI--DSILFKYSINWKNSLNKKRSLPKSTTTKKSEEKENM 183

>KPC1B_CAEEL (P34885) Protein kinase C-like 1B (EC 2.7.11.13) (PKC1B)|
          Length = 707

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +1

Query: 13  QWTEANFILLSYTHGTAIKFCSRQL**LSLRIANLYARKISTLLPFLHLDDNLYR 177
           Q ++  F ++ Y +G  + F  ++        A  YA +++  L FLH +D +YR
Sbjct: 447 QTSDRLFFVMEYVNGGDLMFQIQRARKFDESRARFYAAEVTCALQFLHRNDVIYR 501

>BIOA_MYCLE (P45488) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase|
           (EC 2.6.1.62) (7,8-diamino-pelargonic acid
           aminotransferase) (DAPA aminotransferase)
          Length = 436

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +1

Query: 319 KAAEGRSWWPWLAVHGHSYAIRKDIATTEVRSSSH 423
           +A +  S W W A+HGH +++     TT++ + +H
Sbjct: 58  EALDAMSSW-WTAIHGHGHSVLDAALTTQLGAMNH 91

>BIOA_MYCTU (P0A4X6) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase|
           (EC 2.6.1.62) (7,8-diamino-pelargonic acid
           aminotransferase) (DAPA aminotransferase)
          Length = 437

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +1

Query: 289 FLTWLAEAQK-KAAEGRSWWPWLAVHGHSYAIRKDIATTEVRSSSH 423
           +LT + + Q  +  +  S W W A+HGH +       TT++R  +H
Sbjct: 45  WLTLIRDGQPIEVLDAMSSW-WTAIHGHGHPALDQALTTQLRVMNH 89

>BIOA_MYCBO (P0A4X7) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase|
           (EC 2.6.1.62) (7,8-diamino-pelargonic acid
           aminotransferase) (DAPA aminotransferase)
          Length = 437

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +1

Query: 289 FLTWLAEAQK-KAAEGRSWWPWLAVHGHSYAIRKDIATTEVRSSSH 423
           +LT + + Q  +  +  S W W A+HGH +       TT++R  +H
Sbjct: 45  WLTLIRDGQPIEVLDAMSSW-WTAIHGHGHPALDQALTTQLRVMNH 89


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,478,373
Number of Sequences: 219361
Number of extensions: 1164959
Number of successful extensions: 2567
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2563
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)