ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl30a07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103686.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
2dbj|AK099801.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
4dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
5ref|NM_128475.2| Arabidopsis thaliana RNA binding AT2G29190 mRNA... 56 1e-04
6gb|AY096653.1| Arabidopsis thaliana putative pumilio/Mpt5 family... 56 1e-04
7ref|NM_190576.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
8ref|NM_128476.1| Arabidopsis thaliana RNA binding AT2G29200 mRNA... 50 0.006
9ref|NM_128471.1| Arabidopsis thaliana RNA binding AT2G29140 mRNA... 50 0.006
10gb|AC115834.8| Mus musculus chromosome 3, clone RP24-159L1, comp... 44 0.38
11gb|AC126917.1| Homo sapiens chromosome 5 clone RP11-467F22, comp... 42 1.5
12gb|AC079465.5| Homo sapiens chromosome 5 clone CTD-2124P24, comp... 42 1.5
13dbj|AB127977.1| Buergeria buergeri mitochondrial DNA, complete g... 42 1.5
14gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 42 1.5
15gb|DQ215666.1| Taeniopygia guttata clone 0058P0040B10 beta-2 mic... 40 6.0
16gb|DQ215665.1| Taeniopygia guttata clone 0061P0015A06 beta-2 mic... 40 6.0
17gb|DQ215664.1| Taeniopygia guttata clone 0058P0054A10 beta-2 mic... 40 6.0
18gb|DQ215663.1| Taeniopygia guttata clone 0058P0014G12 beta-2 mic... 40 6.0
19gb|DQ215662.1| Taeniopygia guttata clone 0063P0001A10 beta-2 mic... 40 6.0
20gb|DQ215661.1| Taeniopygia guttata clone 0058P0005C04 beta-2 mic... 40 6.0
21gb|DQ215660.1| Taeniopygia guttata clone 0065P0002H09 beta-2 mic... 40 6.0
22gb|AC169697.1| Rhesus Macaque BAC CH250-38L23 (Children's Hospi... 40 6.0
23gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, com... 40 6.0
24emb|AJ544216.1|SSC544216 Sus scrofa microsatellite DNA, clone 219A3 40 6.0
25ref|XM_805566.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.0
26emb|AL590011.5| Human DNA sequence from clone RP11-88K15 on chro... 40 6.0
27gb|AE014829.1| Plasmodium falciparum 3D7 chromosome 10 section 1... 40 6.0
28emb|AL732589.4| Mouse DNA sequence from clone RP23-405I23 on chr... 40 6.0
29gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome 40 6.0
30gb|AC109633.5| Homo sapiens chromosome 8, clone CTD-2024D23, com... 40 6.0
31emb|BX530085.3| Zebrafish DNA sequence from clone DKEY-18A21 in ... 40 6.0
32gb|AC138527.22| Medicago truncatula clone mth2-10a20, complete s... 40 6.0
33gb|AC004561.3| Arabidopsis thaliana chromosome 2 clone F16P2 map... 40 6.0
34emb|BX323465.7| Zebrafish DNA sequence from clone DKEYP-9C6 in l... 40 6.0
35emb|BX470089.6| Mouse DNA sequence from clone RP24-181I10 on chr... 40 6.0 
>dbj|AK103686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136F19, full
            insert sequence
          Length = 3527

 Score =  107 bits (54), Expect = 3e-20
 Identities = 179/216 (82%), Gaps = 6/216 (2%)
 Strand = Plus / Minus

                                                                        
Query: 229  ccctgacacgactataagctcaaactacaaaatgtacaaagt-ctcaatacaacatgttt 287
            |||||||| ||||||||||  ||||||||||||||||||  | || | ||||||| ||||
Sbjct: 3272 ccctgacatgactataagcaaaaactacaaaatgtacaatcttcttagtacaacacgttt 3213

                                                                        
Query: 288  atttctaac-ttggcttgcagaagcccaaaagaaggcggcagaaggtagatcttggtggc 346
            |||| |||  |||||||| || |||||||| | ||| | || | ||||||||| | | ||
Sbjct: 3212 atttttaaagttggcttgtagcagcccaaa-gcaggagacacagggtagatctggctagc 3154

                                                                        
Query: 347  catggttagctgtacatggtcattcctatgccattaggaaggatattgcgacgactgaag 406
            ||||||||||||||||| ||||||   ||||||||| |||||||||||    | ||||||
Sbjct: 3153 catggttagctgtacattgtcattttcatgccattatgaaggatattg---tgcctgaag 3097

                                                
Query: 407  tccgatcctcctctcaccagcagcaacgagtttttc 442
             || |||||||||||||| |||||||| ||||||||
Sbjct: 3096 cccaatcctcctctcaccggcagcaacaagtttttc 3061
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>dbj|AK099801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098A15, full
            insert sequence
          Length = 3958

 Score =  107 bits (54), Expect = 3e-20
 Identities = 179/216 (82%), Gaps = 6/216 (2%)
 Strand = Plus / Minus

                                                                        
Query: 229  ccctgacacgactataagctcaaactacaaaatgtacaaagt-ctcaatacaacatgttt 287
            |||||||| ||||||||||  ||||||||||||||||||  | || | ||||||| ||||
Sbjct: 3696 ccctgacatgactataagcaaaaactacaaaatgtacaatcttcttagtacaacacgttt 3637

                                                                        
Query: 288  atttctaac-ttggcttgcagaagcccaaaagaaggcggcagaaggtagatcttggtggc 346
            |||| |||  |||||||| || |||||||| | ||| | || | ||||||||| | | ||
Sbjct: 3636 atttttaaagttggcttgtagcagcccaaa-gcaggagacacagggtagatctggctagc 3578

                                                                        
Query: 347  catggttagctgtacatggtcattcctatgccattaggaaggatattgcgacgactgaag 406
            ||||||||||||||||| ||||||   ||||||||| |||||||||||    | ||||||
Sbjct: 3577 catggttagctgtacattgtcattttcatgccattatgaaggatattg---tgcctgaag 3521

                                                
Query: 407  tccgatcctcctctcaccagcagcaacgagtttttc 442
             || |||||||||||||| |||||||| ||||||||
Sbjct: 3520 cccaatcctcctctcaccggcagcaacaagtttttc 3485
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 140/168 (83%), Gaps = 3/168 (1%)
 Strand = Plus / Minus

                                                                            
Query: 229      ccctgacacgactataagctcaaactacaaaatgtacaaagt-ctcaatacaacatgttt 287
                |||||||| ||||||||||  ||||||||||||||||||  | || | ||||||| ||||
Sbjct: 36279378 ccctgacatgactataagcaaaaactacaaaatgtacaatcttcttagtacaacacgttt 36279319

                                                                            
Query: 288      atttctaac-ttggcttgcagaagcccaaaagaaggcggcagaaggtagatcttggtggc 346
                |||| |||  |||||||| || |||||||| | ||| | || | ||||||||| | | ||
Sbjct: 36279318 atttttaaagttggcttgtagcagcccaaa-gcaggagacacagggtagatctggctagc 36279260

                                                                
Query: 347      catggttagctgtacatggtcattcctatgccattaggaaggatattg 394
                ||||||||||||||||| ||||||   ||||||||| |||||||||||
Sbjct: 36279259 catggttagctgtacattgtcattttcatgccattatgaaggatattg 36279212
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>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0446B05
          Length = 149145

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 140/168 (83%), Gaps = 3/168 (1%)
 Strand = Plus / Minus

                                                                         
Query: 229   ccctgacacgactataagctcaaactacaaaatgtacaaagt-ctcaatacaacatgttt 287
             |||||||| ||||||||||  ||||||||||||||||||  | || | ||||||| ||||
Sbjct: 29255 ccctgacatgactataagcaaaaactacaaaatgtacaatcttcttagtacaacacgttt 29196

                                                                         
Query: 288   atttctaac-ttggcttgcagaagcccaaaagaaggcggcagaaggtagatcttggtggc 346
             |||| |||  |||||||| || |||||||| | ||| | || | ||||||||| | | ||
Sbjct: 29195 atttttaaagttggcttgtagcagcccaaa-gcaggagacacagggtagatctggctagc 29137

                                                             
Query: 347   catggttagctgtacatggtcattcctatgccattaggaaggatattg 394
             ||||||||||||||||| ||||||   ||||||||| |||||||||||
Sbjct: 29136 catggttagctgtacattgtcattttcatgccattatgaaggatattg 29089
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>ref|NM_128475.2| Arabidopsis thaliana RNA binding AT2G29190 mRNA, complete cds
          Length = 3699

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 411  atcctcctctcaccagcagcaacgagtttttc 442
            ||||||||||| ||||||||||||||||||||
Sbjct: 3214 atcctcctctctccagcagcaacgagtttttc 3183
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>gb|AY096653.1| Arabidopsis thaliana putative pumilio/Mpt5 family RNA-binding protein
            (At2g29190) mRNA, complete cds
          Length = 3715

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 411  atcctcctctcaccagcagcaacgagtttttc 442
            ||||||||||| ||||||||||||||||||||
Sbjct: 3214 atcctcctctctccagcagcaacgagtttttc 3183
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>ref|NM_190576.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3147

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 401  ctgaagtccgatcctcctctcaccagcagcaacgagtttttc 442
            |||||| || |||||||||||||| |||||||| ||||||||
Sbjct: 3129 ctgaagcccaatcctcctctcaccggcagcaacaagtttttc 3088
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>ref|NM_128476.1| Arabidopsis thaliana RNA binding AT2G29200 mRNA, complete cds
          Length = 3106

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 414  ctcctctcaccagcagcaacgagtttttc 442
            |||||||| ||||||||||||||||||||
Sbjct: 2867 ctcctctctccagcagcaacgagtttttc 2839
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>ref|NM_128471.1| Arabidopsis thaliana RNA binding AT2G29140 mRNA, complete cds
          Length = 3092

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 414  ctcctctcaccagcagcaacgagtttttc 442
            |||||||| ||||||||||||||||||||
Sbjct: 2855 ctcctctctccagcagcaacgagtttttc 2827
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>gb|AC115834.8| Mus musculus chromosome 3, clone RP24-159L1, complete sequence
          Length = 175998

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 246   gctcaaactacaaaatgtacaa 267
             ||||||||||||||||||||||
Sbjct: 65002 gctcaaactacaaaatgtacaa 64981
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>gb|AC126917.1| Homo sapiens chromosome 5 clone RP11-467F22, complete sequence
          Length = 206737

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 242    ataagctcaaactacaaaatg 262
              |||||||||||||||||||||
Sbjct: 134735 ataagctcaaactacaaaatg 134755
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>gb|AC079465.5| Homo sapiens chromosome 5 clone CTD-2124P24, complete sequence
          Length = 184585

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 242    ataagctcaaactacaaaatg 262
              |||||||||||||||||||||
Sbjct: 134779 ataagctcaaactacaaaatg 134759
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>dbj|AB127977.1| Buergeria buergeri mitochondrial DNA, complete genome
          Length = 19959

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 289  tttctaacttggcttgcagaagcccaaaa 317
            |||||||||||||||  ||||||||||||
Sbjct: 9658 tttctaacttggcttcaagaagcccaaaa 9686
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 97      tctctcaggattgcaaatttg 117
               |||||||||||||||||||||
Sbjct: 2088891 tctctcaggattgcaaatttg 2088911
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>gb|DQ215666.1| Taeniopygia guttata clone 0058P0040B10 beta-2 microglobulin variant
           3-like mRNA, complete sequence
          Length = 694

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   atgaacaatggacagaagct 27
           ||||||||||||||||||||
Sbjct: 450 atgaacaatggacagaagct 431
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>gb|DQ215665.1| Taeniopygia guttata clone 0061P0015A06 beta-2 microglobulin variant
           3-like mRNA, complete sequence
          Length = 697

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   atgaacaatggacagaagct 27
           ||||||||||||||||||||
Sbjct: 469 atgaacaatggacagaagct 450
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>gb|DQ215664.1| Taeniopygia guttata clone 0058P0054A10 beta-2 microglobulin-like
           mRNA, complete sequence
          Length = 681

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   atgaacaatggacagaagct 27
           ||||||||||||||||||||
Sbjct: 449 atgaacaatggacagaagct 430
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>gb|DQ215663.1| Taeniopygia guttata clone 0058P0014G12 beta-2 microglobulin variant
           1-like mRNA, complete sequence
          Length = 681

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   atgaacaatggacagaagct 27
           ||||||||||||||||||||
Sbjct: 449 atgaacaatggacagaagct 430
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>gb|DQ215662.1| Taeniopygia guttata clone 0063P0001A10 beta-2 microglobulin variant
           2-like mRNA, complete sequence
          Length = 872

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   atgaacaatggacagaagct 27
           ||||||||||||||||||||
Sbjct: 467 atgaacaatggacagaagct 448
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>gb|DQ215661.1| Taeniopygia guttata clone 0058P0005C04 beta-2 microglobulin variant
           2-like mRNA, complete sequence
          Length = 860

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   atgaacaatggacagaagct 27
           ||||||||||||||||||||
Sbjct: 468 atgaacaatggacagaagct 449
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>gb|DQ215660.1| Taeniopygia guttata clone 0065P0002H09 beta-2 microglobulin variant
           4-like mRNA, complete sequence
          Length = 700

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   atgaacaatggacagaagct 27
           ||||||||||||||||||||
Sbjct: 479 atgaacaatggacagaagct 460
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>gb|AC169697.1| Rhesus Macaque  BAC CH250-38L23 (Children's Hospital Oakland Research
            Institute Rhesus macaque Adult Male BAC Library) complete
            sequence
          Length = 154876

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 5    aaaatgaacaatggacagaa 24
            ||||||||||||||||||||
Sbjct: 4295 aaaatgaacaatggacagaa 4314
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>gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, complete sequence
          Length = 186062

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   tcaatacaacatgtttattt 291
             ||||||||||||||||||||
Sbjct: 62693 tcaatacaacatgtttattt 62674
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>emb|AJ544216.1|SSC544216 Sus scrofa microsatellite DNA, clone 219A3
          Length = 330

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  agctctgatagctctctctc 102
           ||||||||||||||||||||
Sbjct: 189 agctctgatagctctctctc 208
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>ref|XM_805566.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508567.40) partial mRNA
          Length = 876

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 186 cttctccacggcagcatcag 205
           ||||||||||||||||||||
Sbjct: 585 cttctccacggcagcatcag 566
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>emb|AL590011.5| Human DNA sequence from clone RP11-88K15 on chromosome 6 Contains part
             of the RAB3IP2 gene for RAB3 interacting protein 2 and one
             CpG island, complete sequence
          Length = 154979

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 326   cagaaggtagatcttggtgg 345
             ||||||||||||||||||||
Sbjct: 79490 cagaaggtagatcttggtgg 79509
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>gb|AE014829.1| Plasmodium falciparum 3D7 chromosome 10 section 1 of 7 of the complete
              sequence
          Length = 250078

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      gaaaatgaacaatggacaga 23
              ||||||||||||||||||||
Sbjct: 207068 gaaaatgaacaatggacaga 207049
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>emb|AL732589.4| Mouse DNA sequence from clone RP23-405I23 on chromosome 11 Contains a
             3'-5' exoribonuclease CSL4 homolog pseudogene and a
             glutamate-ammonia ligase (glutamine synthase) (Glul)
             pseudogene, complete sequence
          Length = 134644

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     aaaatgaacaatggacagaa 24
             ||||||||||||||||||||
Sbjct: 23824 aaaatgaacaatggacagaa 23805
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>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome
          Length = 2225959

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 422    accagcagcaacgagttttt 441
              ||||||||||||||||||||
Sbjct: 132122 accagcagcaacgagttttt 132141
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>gb|AC109633.5| Homo sapiens chromosome 8, clone CTD-2024D23, complete sequence
          Length = 134242

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   caatacaacatgtttatttc 292
             ||||||||||||||||||||
Sbjct: 45032 caatacaacatgtttatttc 45051
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>emb|BX530085.3| Zebrafish DNA sequence from clone DKEY-18A21 in linkage group 14,
              complete sequence
          Length = 227326

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     agctctctctcaggattgca 111
              ||||||||||||||||||||
Sbjct: 201483 agctctctctcaggattgca 201464
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>gb|AC138527.22| Medicago truncatula clone mth2-10a20, complete sequence
          Length = 115023

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 411    atcctcctctcaccagcagc 430
              ||||||||||||||||||||
Sbjct: 104968 atcctcctctcaccagcagc 104949
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>gb|AC004561.3| Arabidopsis thaliana chromosome 2 clone F16P2 map ve014, complete
              sequence
          Length = 131743

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 423    ccagcagcaacgagtttttc 442
              ||||||||||||||||||||
Sbjct: 124867 ccagcagcaacgagtttttc 124886



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 423    ccagcagcaacgagtttttc 442
              ||||||||||||||||||||
Sbjct: 115244 ccagcagcaacgagtttttc 115225



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 423    ccagcagcaacgagtttttc 442
              ||||||||||||||||||||
Sbjct: 110079 ccagcagcaacgagtttttc 110060
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>emb|BX323465.7| Zebrafish DNA sequence from clone DKEYP-9C6 in linkage group 14, complete
              sequence
          Length = 174182

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     agctctctctcaggattgca 111
              ||||||||||||||||||||
Sbjct: 145264 agctctctctcaggattgca 145245
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>emb|BX470089.6| Mouse DNA sequence from clone RP24-181I10 on chromosome X, complete
             sequence
          Length = 61439

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 414   ctcctctcaccagcagcaac 433
             ||||||||||||||||||||
Sbjct: 58518 ctcctctcaccagcagcaac 58499


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,913,086
Number of Sequences: 3902068
Number of extensions: 3913086
Number of successful extensions: 83182
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83068
Number of HSP's gapped (non-prelim): 104
length of query: 443
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 421
effective length of database: 17,147,199,772
effective search space: 7218971104012
effective search space used: 7218971104012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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