ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl30a02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY359936.1| Trachelomonas grandis large subunit ribosomal RNA... 42 1.7
2gb|AC102611.10| Mus musculus chromosome 1, clone RP23-416O18, co... 42 1.7
3gb|BC054616.1| Danio rerio zgc:64090, mRNA (cDNA clone MGC:64090... 42 1.7
4gb|AC134530.3| Mus musculus BAC clone RP24-507K16 from chromosom... 42 1.7
5gb|AF311917.1| Aotinae gen. sp. Duffy antigen/chemokine receptor... 42 1.7
6gb|AC004848.1| Homo sapiens PAC clone RP4-649P17 from 7, complet... 42 1.7
7emb|AL035413.19|HS657E11 Human DNA sequence from clone RP4-657E1... 42 1.7
8gb|AC158961.3| Mus musculus chromosome 1, clone RP23-316E20, com... 42 1.7
9dbj|AK126387.1| Homo sapiens cDNA FLJ44423 fis, clone UTERU2004929 42 1.7
10gb|AC078983.17| Homo sapiens 12q BAC RP11-473M14 (Roswell Park C... 42 1.7
11ref|XM_680916.1| PREDICTED: Danio rerio skip (LOC572810), mRNA 42 1.7
12gb|AC078824.13| Homo sapiens 12 BAC RP11-542B15 (Roswell Park Ca... 42 1.7
13ref|NM_200411.1| Danio rerio zgc:64090 (zgc:64090), mRNA 42 1.7
14ref|XM_528664.1| PREDICTED: Pan troglodytes similar to FLJ14466 ... 40 6.6
15ref|NM_184796.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.6
16gb|AC142345.1| Pan troglodytes BAC clone RP43-1K4 from Y, comple... 40 6.6
17gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.6
18emb|CT025553.4| Mouse DNA sequence from clone RP23-470O20 on chr... 40 6.6
19gb|AC135780.2| Homo sapiens chromosome 16 clone CTD-2320F3, comp... 40 6.6
20gb|AC098690.3| Homo sapiens chromosome 1 clone RP11-507I14, comp... 40 6.6
21emb|AL355475.7| Human DNA sequence from clone RP1-241M7 on chrom... 40 6.6
22gb|AC093563.3| Homo sapiens chromosome 1 clone RP4-648I13, compl... 40 6.6
23dbj|BS000600.1| Pan troglodytes chromosome Y clone:PTB-253H05, c... 40 6.6
24emb|BX537340.15| Zebrafish DNA sequence from clone DKEYP-93A2 in... 40 6.6
25gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 6.6
26gb|AC146513.4| Pan troglodytes BAC clone CH251-223P3 from chromo... 40 6.6
27gb|AC019187.3|AC019187 Homo sapiens BAC clone RP11-304J20 from 1... 40 6.6
28dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
29gb|AC140062.11| Homo sapiens 12 BAC RP13-298C8 (Roswell Park Can... 40 6.6
30gb|AC116667.2| Homo sapiens chromosome 16 clone RP11-346C20, com... 40 6.6
31gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genom... 40 6.6
32ref|NM_030830.1| Rattus norvegicus leucine zipper protein 1 (Luz... 40 6.6
33gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic ... 40 6.6
34gb|AC009240.6|AC009240 Homo sapiens BAC clone RP11-489O13 from Y... 40 6.6
35gb|AC133798.3| Homo sapiens 12 BAC RP11-552F17 (Roswell Park Can... 40 6.6
36gb|AF181259.1|AF181259 Rattus norvegicus putative transcription ... 40 6.6
37dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 6.6
38gb|BC091945.1| Danio rerio cDNA clone IMAGE:7148721 40 6.6
39dbj|AK068322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
40emb|AL138996.4|CNS01DX1 Human chromosome 14 DNA sequence BAC R-9... 40 6.6
41gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 40 6.6
42emb|CT010467.6| Mouse DNA sequence from clone RP23-81C12 on chro... 40 6.6
43emb|AL732396.11| Mouse DNA sequence from clone RP23-93M14 on chr... 40 6.6
44gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 40 6.6 
>gb|AY359936.1| Trachelomonas grandis large subunit ribosomal RNA gene, partial
           sequence
          Length = 1448

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 117 agcaactctactcctgagtgc 137
           |||||||||||||||||||||
Sbjct: 306 agcaactctactcctgagtgc 286
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>gb|AC102611.10| Mus musculus chromosome 1, clone RP23-416O18, complete sequence
          Length = 210808

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 189    tgtgaagtgtttcacgcattt 209
              |||||||||||||||||||||
Sbjct: 139769 tgtgaagtgtttcacgcattt 139749
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>gb|BC054616.1| Danio rerio zgc:64090, mRNA (cDNA clone MGC:64090 IMAGE:6794879),
           complete cds
          Length = 2782

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 308 tctccagcgcacaggaagggagtgg 332
           ||||||||||||||||||| |||||
Sbjct: 375 tctccagcgcacaggaaggaagtgg 399
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>gb|AC134530.3| Mus musculus BAC clone RP24-507K16 from chromosome 5, complete sequence
          Length = 215112

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 351   gcaacatgatcaacttatcac 371
             |||||||||||||||||||||
Sbjct: 59108 gcaacatgatcaacttatcac 59088
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>gb|AF311917.1| Aotinae gen. sp. Duffy antigen/chemokine receptor (DARC) gene,
           complete cds
          Length = 1488

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 451 catacttttcagacctctctt 471
           |||||||||||||||||||||
Sbjct: 720 catacttttcagacctctctt 740
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>gb|AC004848.1| Homo sapiens PAC clone RP4-649P17 from 7, complete sequence
          Length = 135214

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 134   gtgcaataaacataacacctccatc 158
             ||||||||||||||||| |||||||
Sbjct: 64724 gtgcaataaacataacatctccatc 64700
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>emb|AL035413.19|HS657E11 Human DNA sequence from clone RP4-657E11 on chromosome 1p35.1-36.23
              Contains the 5' end of a novel gene, the C1orf33 gene for
              chromosome 1 open reading frame 33, four novel genes, the
              AKR7A3 gene for aldo-keto reductase family 7, member A3
              (aflatoxin aldehyde reductase), the  AKR7A2 gene for
              aldo-keto reductase family 7, member A2 (aflatoxin aldehyde
              reductase), the 3' end of the CAPZB gene for capping
              protein (actin filament) muscle Z-line, beta and two CpG
              islands, complete sequence
          Length = 154130

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 432    aggaaagccaatgccttgcca 452
              |||||||||||||||||||||
Sbjct: 116818 aggaaagccaatgccttgcca 116838
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>gb|AC158961.3| Mus musculus chromosome 1, clone RP23-316E20, complete sequence
          Length = 202205

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 189    tgtgaagtgtttcacgcattt 209
              |||||||||||||||||||||
Sbjct: 174586 tgtgaagtgtttcacgcattt 174606
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>dbj|AK126387.1| Homo sapiens cDNA FLJ44423 fis, clone UTERU2004929
          Length = 2564

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 432  aggaaagccaatgccttgcca 452
            |||||||||||||||||||||
Sbjct: 1628 aggaaagccaatgccttgcca 1608
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>gb|AC078983.17| Homo sapiens 12q BAC RP11-473M14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 163613

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 439   ccaatgccttgccatactttt 459
             |||||||||||||||||||||
Sbjct: 59246 ccaatgccttgccatactttt 59226
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>ref|XM_680916.1| PREDICTED: Danio rerio skip (LOC572810), mRNA
          Length = 567

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 308 tctccagcgcacaggaagggagtgg 332
           ||||||||||||||||||| |||||
Sbjct: 308 tctccagcgcacaggaaggaagtgg 332
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>gb|AC078824.13| Homo sapiens 12 BAC RP11-542B15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 173697

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 439    ccaatgccttgccatactttt 459
              |||||||||||||||||||||
Sbjct: 171376 ccaatgccttgccatactttt 171356
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>ref|NM_200411.1| Danio rerio zgc:64090 (zgc:64090), mRNA
          Length = 2782

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 308 tctccagcgcacaggaagggagtgg 332
           ||||||||||||||||||| |||||
Sbjct: 375 tctccagcgcacaggaaggaagtgg 399
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>ref|XM_528664.1| PREDICTED: Pan troglodytes similar to FLJ14466 protein (LOC473293),
           mRNA
          Length = 1242

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 279 cgaggtcaccaggggcatgc 298
           ||||||||||||||||||||
Sbjct: 511 cgaggtcaccaggggcatgc 492
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>ref|NM_184796.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2859

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 432  aggaaagccaatgccttgccatacttttcagacctctcttgctc 475
            ||||||||||  || || |||||||||||||  |||||||||||
Sbjct: 2795 aggaaagccatggcttttccatacttttcagctctctcttgctc 2752
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>gb|AC142345.1| Pan troglodytes BAC clone RP43-1K4 from Y, complete sequence
          Length = 213921

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 36    atacaagaaatctggaagaaaata 59
             |||||| |||||||||||||||||
Sbjct: 71634 atacaaaaaatctggaagaaaata 71657
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                            
Query: 432      aggaaagccaatgccttgccatacttttcagacctctcttgctc 475
                ||||||||||  || || |||||||||||||  |||||||||||
Sbjct: 22094111 aggaaagccatggcttttccatacttttcagctctctcttgctc 22094154
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>emb|CT025553.4| Mouse DNA sequence from clone RP23-470O20 on chromosome 14, complete
             sequence
          Length = 173093

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    gaagaaaataacaacaaaat 69
             ||||||||||||||||||||
Sbjct: 52691 gaagaaaataacaacaaaat 52710
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>gb|AC135780.2| Homo sapiens chromosome 16 clone CTD-2320F3, complete sequence
          Length = 125603

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    ggaagaaaataacaacaaaa 68
             ||||||||||||||||||||
Sbjct: 33769 ggaagaaaataacaacaaaa 33788
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>gb|AC098690.3| Homo sapiens chromosome 1 clone RP11-507I14, complete sequence
          Length = 128000

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 43  aaatctggaagaaaataaca 62
           ||||||||||||||||||||
Sbjct: 863 aaatctggaagaaaataaca 882
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>emb|AL355475.7| Human DNA sequence from clone RP1-241M7 on chromosome 1q43-44, complete
             sequence
          Length = 84707

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   ctactcctgagtgcaataaa 143
             ||||||||||||||||||||
Sbjct: 32634 ctactcctgagtgcaataaa 32653
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>gb|AC093563.3| Homo sapiens chromosome 1 clone RP4-648I13, complete sequence
          Length = 163579

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    aaatctggaagaaaataaca 62
             ||||||||||||||||||||
Sbjct: 54016 aaatctggaagaaaataaca 54035
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>dbj|BS000600.1| Pan troglodytes chromosome Y clone:PTB-253H05, complete sequences
          Length = 100704

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 36    atacaagaaatctggaagaaaata 59
             |||||| |||||||||||||||||
Sbjct: 25108 atacaaaaaatctggaagaaaata 25085
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>emb|BX537340.15| Zebrafish DNA sequence from clone DKEYP-93A2 in linkage group 7, complete
              sequence
          Length = 192070

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     gaaatctggaagaaaataac 61
              ||||||||||||||||||||
Sbjct: 167649 gaaatctggaagaaaataac 167668
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 36       atacaagaaatctggaagaaaata 59
                |||||| |||||||||||||||||
Sbjct: 15327658 atacaaaaaatctggaagaaaata 15327681
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>gb|AC146513.4| Pan troglodytes BAC clone CH251-223P3 from chromosome y, complete
             sequence
          Length = 162679

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 36    atacaagaaatctggaagaaaata 59
             |||||| |||||||||||||||||
Sbjct: 12403 atacaaaaaatctggaagaaaata 12380
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>gb|AC019187.3|AC019187 Homo sapiens BAC clone RP11-304J20 from 1, complete sequence
          Length = 174673

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    aaatctggaagaaaataaca 62
             ||||||||||||||||||||
Sbjct: 90909 aaatctggaagaaaataaca 90890
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                            
Query: 432      aggaaagccaatgccttgccatacttttcagacctctcttgctc 475
                ||||||||||  || || |||||||||||||  |||||||||||
Sbjct: 22087140 aggaaagccatggcttttccatacttttcagctctctcttgctc 22087183
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>gb|AC140062.11| Homo sapiens 12 BAC RP13-298C8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 64695

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   cgaggtcaccaggggcatgc 298
             ||||||||||||||||||||
Sbjct: 44743 cgaggtcaccaggggcatgc 44724
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>gb|AC116667.2| Homo sapiens chromosome 16 clone RP11-346C20, complete sequence
          Length = 156100

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    ggaagaaaataacaacaaaa 68
             ||||||||||||||||||||
Sbjct: 77872 ggaagaaaataacaacaaaa 77853
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>gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genomic sequence, complete
             sequence
          Length = 167397

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 432   aggaaagccaatgccttgccatacttttcagacctctcttgctc 475
             ||||||||||  || || |||||||||||||  |||||||||||
Sbjct: 54171 aggaaagccatggcttttccatacttttcagctctctcttgctc 54128
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>ref|NM_030830.1| Rattus norvegicus leucine zipper protein 1 (Luzp1), mRNA
          Length = 10929

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 428  ttggaggaaagccaatgcct 447
            ||||||||||||||||||||
Sbjct: 8105 ttggaggaaagccaatgcct 8124
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>gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic sequence, complete
              sequence
          Length = 132987

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                          
Query: 432    aggaaagccaatgccttgccatacttttcagacctctcttgctc 475
              ||||||||||  || || |||||||||||||  |||||||||||
Sbjct: 130769 aggaaagccatggcttttccatacttttcagctctctcttgctc 130726
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>gb|AC009240.6|AC009240 Homo sapiens BAC clone RP11-489O13 from Y, complete sequence
          Length = 101290

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 36    atacaagaaatctggaagaaaata 59
             |||||| |||||||||||||||||
Sbjct: 98518 atacaaaaaatctggaagaaaata 98495
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>gb|AC133798.3| Homo sapiens 12 BAC RP11-552F17 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 20939

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 279  cgaggtcaccaggggcatgc 298
            ||||||||||||||||||||
Sbjct: 1078 cgaggtcaccaggggcatgc 1059
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>gb|AF181259.1|AF181259 Rattus norvegicus putative transcription factor LUZP (Luzp) mRNA,
            complete cds
          Length = 10929

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 428  ttggaggaaagccaatgcct 447
            ||||||||||||||||||||
Sbjct: 8105 ttggaggaaagccaatgcct 8124
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>dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLM24
          Length = 87487

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    aagaaaataacaacaaaatc 70
             ||||||||||||||||||||
Sbjct: 39022 aagaaaataacaacaaaatc 39003
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>gb|BC091945.1| Danio rerio cDNA clone IMAGE:7148721
          Length = 1590

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  gaaatctggaagaaaataac 61
           ||||||||||||||||||||
Sbjct: 470 gaaatctggaagaaaataac 489
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>dbj|AK068322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013150A21, full
            insert sequence
          Length = 3259

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 432  aggaaagccaatgccttgccatacttttcagacctctcttgctc 475
            ||||||||||  || || |||||||||||||  |||||||||||
Sbjct: 2729 aggaaagccatggcttttccatacttttcagctctctcttgctc 2686
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>emb|AL138996.4|CNS01DX1 Human chromosome 14 DNA sequence BAC R-902B17 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 184260

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   ggtgtgtggccatgaagtgg 251
             ||||||||||||||||||||
Sbjct: 29648 ggtgtgtggccatgaagtgg 29667
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>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 436    aagccaatgccttgccatac 455
              ||||||||||||||||||||
Sbjct: 661649 aagccaatgccttgccatac 661668
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>emb|CT010467.6| Mouse DNA sequence from clone RP23-81C12 on chromosome 17, complete
             sequence
          Length = 216559

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    ggaagaaaataacaacaaaa 68
             ||||||||||||||||||||
Sbjct: 79397 ggaagaaaataacaacaaaa 79416
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>emb|AL732396.11| Mouse DNA sequence from clone RP23-93M14 on chromosome X, complete
              sequence
          Length = 173254

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     aagaaaataacaacaaaatc 70
              ||||||||||||||||||||
Sbjct: 163924 aagaaaataacaacaaaatc 163943
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>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 441     aatgccttgccatacttttc 460
               ||||||||||||||||||||
Sbjct: 2821211 aatgccttgccatacttttc 2821192


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,428,026
Number of Sequences: 3902068
Number of extensions: 4428026
Number of successful extensions: 117742
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117573
Number of HSP's gapped (non-prelim): 169
length of query: 485
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 463
effective length of database: 17,147,199,772
effective search space: 7939153494436
effective search space used: 7939153494436
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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