ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl30a01 |
|---|---|
| Clone Library Name | barley_pub |
>PLDD1_ARATH (Q9C5Y0) Phospholipase D delta (EC 3.1.4.4) (AtPLDdelta) (PLD delta)| Length = 868 Score = 91.7 bits (226), Expect = 9e-19 Identities = 41/71 (57%), Positives = 56/71 (78%), Gaps = 1/71 (1%) Frame = -2 Query: 471 ECVRLVNQIAEDNWERFASEEMKMLQGHLLRYPVKVEPDGKIVPLPDQECFPDVGGKICG 292 EC++ VN I+E+NW+RF + LQGHL++YP++V+ DGK+ PLPD E FPDVGGKI G Sbjct: 797 ECLKKVNTISEENWKRFIDPKFSELQGHLIKYPLQVDVDGKVSPLPDYETFPDVGGKIIG 856 Query: 291 APT-SLPDSLT 262 A + +LPD+LT Sbjct: 857 AHSMALPDTLT 867
>PLDB2_ARATH (O23078) Phospholipase D beta 2 (EC 3.1.4.4) (AtPLDbeta2) (PLD beta| 2) (PLDdelta1) Length = 915 Score = 83.2 bits (204), Expect = 3e-16 Identities = 35/70 (50%), Positives = 53/70 (75%) Frame = -2 Query: 468 CVRLVNQIAEDNWERFASEEMKMLQGHLLRYPVKVEPDGKIVPLPDQECFPDVGGKICGA 289 CVR V +AE+NWE+F SEE+ ++GHL++YPV+V+ GK+ PLP E FPDVGG + G+ Sbjct: 846 CVRKVRTVAEENWEQFRSEEVSEMRGHLMKYPVEVDRKGKVRPLPGSEEFPDVGGNVVGS 905 Query: 288 PTSLPDSLTM 259 ++ ++LT+ Sbjct: 906 FLAIQENLTI 915
>PLDB1_ARATH (P93733) Phospholipase D beta 1 (EC 3.1.4.4) (AtPLDbeta1) (PLD beta| 1) (PLDbeta) Length = 967 Score = 82.0 bits (201), Expect = 7e-16 Identities = 36/71 (50%), Positives = 52/71 (73%) Frame = -2 Query: 471 ECVRLVNQIAEDNWERFASEEMKMLQGHLLRYPVKVEPDGKIVPLPDQECFPDVGGKICG 292 ECVR V + E NW++FA+EE+ ++GHLL+YPV+V+ GK+ PLP E FPDVGG I G Sbjct: 897 ECVRKVRTMGERNWKQFAAEEVSDMRGHLLKYPVEVDRKGKVRPLPGSETFPDVGGNIVG 956 Query: 291 APTSLPDSLTM 259 ++ ++LT+ Sbjct: 957 TFIAIQENLTI 967
>PLDG1_ARATH (Q9T053) Phospholipase D gamma 1 (EC 3.1.4.4) (AtPLDgamma1) (PLD| gamma 1) (Choline phosphatase) (Lipophosphodiesterase II) (Lecithinase D) Length = 858 Score = 80.5 bits (197), Expect = 2e-15 Identities = 36/71 (50%), Positives = 53/71 (74%) Frame = -2 Query: 471 ECVRLVNQIAEDNWERFASEEMKMLQGHLLRYPVKVEPDGKIVPLPDQECFPDVGGKICG 292 ECVR V Q++E NW ++A+EE+ + GHLL+YPV+V+ GK+ LP E FPD+GGKI G Sbjct: 788 ECVRRVRQLSELNWRQYAAEEVTEMSGHLLKYPVQVDRTGKVSSLPGCETFPDLGGKIIG 847 Query: 291 APTSLPDSLTM 259 + +L ++LT+ Sbjct: 848 SFLALQENLTI 858
>PLDG2_ARATH (Q9T051) Phospholipase D gamma 2 (EC 3.1.4.4) (AtPLDgamma2) (PLD| gamma 2) Length = 824 Score = 80.1 bits (196), Expect = 3e-15 Identities = 36/71 (50%), Positives = 53/71 (74%) Frame = -2 Query: 471 ECVRLVNQIAEDNWERFASEEMKMLQGHLLRYPVKVEPDGKIVPLPDQECFPDVGGKICG 292 ECVR V Q++E NW ++A+EE+ + GHLL+YPV+V+ GK+ LP E FPD+GGKI G Sbjct: 754 ECVRRVRQLSELNWGQYAAEEVTEMSGHLLKYPVQVDKTGKVSSLPGCETFPDLGGKIIG 813 Query: 291 APTSLPDSLTM 259 + +L ++LT+ Sbjct: 814 SFLTLQENLTI 824
>PLDG3_ARATH (Q9T052) Phospholipase D gamma 3 (EC 3.1.4.4) (AtPLDgamma3) (PLD| gamma 3) Length = 866 Score = 78.6 bits (192), Expect = 8e-15 Identities = 35/71 (49%), Positives = 52/71 (73%) Frame = -2 Query: 471 ECVRLVNQIAEDNWERFASEEMKMLQGHLLRYPVKVEPDGKIVPLPDQECFPDVGGKICG 292 ECVR V Q++E NW ++A+EE+ + GHLL+YPV+V+ GK+ LP E FPD+GGKI G Sbjct: 796 ECVRRVRQLSELNWRQYAAEEVTEMPGHLLKYPVQVDRTGKVSSLPGYETFPDLGGKIIG 855 Query: 291 APTSLPDSLTM 259 + + ++LT+ Sbjct: 856 SFLVVEENLTI 866
>PLDA1_RICCO (Q41142) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 65.9 bits (159), Expect = 5e-11 Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 2/72 (2%) Frame = -2 Query: 471 ECVRLVNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDVGGKIC 295 ECVR VNQ+AE W+ ++SE ++ L GHLLRYP+ V +G + LP E FPD ++ Sbjct: 736 ECVRKVNQMAEKYWDLYSSETLEHDLPGHLLRYPIGVASEGDVTELPGTEFFPDTKARVL 795 Query: 294 GAPTS-LPDSLT 262 GA + LP LT Sbjct: 796 GAKSDYLPPILT 807
>PLDA1_VIGUN (O04865) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 809 Score = 64.3 bits (155), Expect = 1e-10 Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 2/72 (2%) Frame = -2 Query: 471 ECVRLVNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDVGGKIC 295 EC+ VNQIA+ W+ ++SE ++ L GHLLRYP+ V +G++ LP E FPD +I Sbjct: 737 ECINKVNQIADKYWDLYSSESLERDLPGHLLRYPIGVASEGEVTELPGFEFFPDTKARIL 796 Query: 294 GAPTS-LPDSLT 262 GA LP LT Sbjct: 797 GAKADYLPPILT 808
>PLDA1_ORYSA (Q43007) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD alpha| 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 812 Score = 63.5 bits (153), Expect = 3e-10 Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 2/72 (2%) Frame = -2 Query: 471 ECVRLVNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDVGGKIC 295 ECV+ VN+IAE W+ ++S++++ L GHLL YP+ V DG + LP E FPD ++ Sbjct: 740 ECVQKVNRIAEKYWDMYSSDDLQQDLPGHLLSYPIGVASDGVVTELPGMEYFPDTRARVL 799 Query: 294 GAPTS-LPDSLT 262 GA + +P LT Sbjct: 800 GAKSDYMPPILT 811
>PLDA2_ORYSA (P93844) Phospholipase D alpha 2 (EC 3.1.4.4) (PLD alpha 2)| (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 818 Score = 62.4 bits (150), Expect = 6e-10 Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%) Frame = -2 Query: 471 ECVRLVNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDVGGKIC 295 ECV+ VN++A+ W+ +AS+E+ L GHLL YPV+V +G + LP + FPD + Sbjct: 747 ECVQRVNKMADKYWDLYASDELNDDLPGHLLTYPVRVTKEGTVTELPGAKFFPDTQAPVI 806 Query: 294 GAPTSLPDSLT 262 G +LP LT Sbjct: 807 GTKGNLPPFLT 817
>PLDA1_MAIZE (Q43270) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 812 Score = 62.0 bits (149), Expect = 7e-10 Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 2/72 (2%) Frame = -2 Query: 471 ECVRLVNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDVGGKIC 295 ECV+ VN++AE W+ ++S++++ L GHLL YP+ V DG + LP E FPD ++ Sbjct: 740 ECVQKVNEVAEKYWDLYSSDDLEQDLPGHLLSYPIGVTADGSVTELPGMENFPDTRARVL 799 Query: 294 GAPTS-LPDSLT 262 G + LP LT Sbjct: 800 GNKSDYLPPILT 811
>PLDA1_PIMBR (O04883) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 61.2 bits (147), Expect = 1e-09 Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 2/72 (2%) Frame = -2 Query: 471 ECVRLVNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDVGGKIC 295 +CV+ VN +A+ W+ ++SE ++ L GHLLRYP+ V +G + LP E FPD ++ Sbjct: 736 DCVQKVNTVADKYWDLYSSETLENDLPGHLLRYPIAVASEGNVTELPGTEFFPDTKARVL 795 Query: 294 GAPTS-LPDSLT 262 GA + LP LT Sbjct: 796 GAKSDFLPPILT 807
>PLDA2_BRAOC (P55939) Phospholipase D alpha 2 precursor (EC 3.1.4.4) (PLD 2)| (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 812 Score = 60.5 bits (145), Expect = 2e-09 Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 2/72 (2%) Frame = -2 Query: 471 ECVRLVNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDVGGKIC 295 EC+ VN+IA+ W+ ++SE ++ L GHLLRYP+ V+ +G I LP E FPD +I Sbjct: 740 ECIEKVNRIADKYWDFYSSESLEHDLPGHLLRYPISVDNEGNITELPGFEFFPDSKARIL 799 Query: 294 GAPTS-LPDSLT 262 G LP LT Sbjct: 800 GNKVDYLPPILT 811
>PLDA2_ARATH (Q9SSQ9) Phospholipase D alpha 2 (EC 3.1.4.4) (AtPLDalpha2) (PLD| alpha 2) (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 810 Score = 60.1 bits (144), Expect = 3e-09 Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 2/72 (2%) Frame = -2 Query: 471 ECVRLVNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDVGGKIC 295 EC++ VN++A+ W+ ++SE ++ L GHLLRYP+ + +G I LP E FPD +I Sbjct: 738 ECIQKVNRVADKYWDLYSSESLEHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARIL 797 Query: 294 GAPTS-LPDSLT 262 G + +P LT Sbjct: 798 GVKSDYMPPILT 809
>PLDA1_TOBAC (P93400) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 59.7 bits (143), Expect = 4e-09 Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 2/72 (2%) Frame = -2 Query: 471 ECVRLVNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDVGGKIC 295 ECV VN++A+ W+ ++SE ++ L GHLLRYP+ V +G + LP E FPD ++ Sbjct: 736 ECVSKVNRMADKYWDLYSSESLERDLPGHLLRYPIGVASEGDVTELPGAEHFPDTKARVL 795 Query: 294 GAPTS-LPDSLT 262 G + LP LT Sbjct: 796 GTKSDYLPPILT 807
>PLDA1_BRAOC (O82549) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 810 Score = 59.3 bits (142), Expect = 5e-09 Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 2/72 (2%) Frame = -2 Query: 471 ECVRLVNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDVGGKIC 295 EC+ VN+I++ W+ ++SE ++ L GHLLRYPV V+ +G + P E FPD +I Sbjct: 738 ECIEKVNRISDKYWDLYSSESLEHDLPGHLLRYPVDVDGEGDVTEFPGFEFFPDTKARIL 797 Query: 294 GAPTS-LPDSLT 262 G + LP LT Sbjct: 798 GTKSDYLPPILT 809
>PLDA1_ARATH (Q38882) Phospholipase D alpha 1 (EC 3.1.4.4) (AtPLDalpha1) (PLD| alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) (PLDalpha) Length = 810 Score = 59.3 bits (142), Expect = 5e-09 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 2/72 (2%) Frame = -2 Query: 471 ECVRLVNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDVGGKIC 295 EC+ VN+I++ W+ ++SE ++ L GHLLRYP+ V +G I LP E FPD +I Sbjct: 738 ECIEKVNRISDKYWDFYSSESLEHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARIL 797 Query: 294 GAPTS-LPDSLT 262 G + LP LT Sbjct: 798 GTKSDYLPPILT 809
>PLDZ1_ARATH (P58766) Phospholipase D zeta (EC 3.1.4.4) (AtPLDzeta) (PLD zeta)| Length = 820 Score = 54.7 bits (130), Expect = 1e-07 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 4/74 (5%) Frame = -2 Query: 471 ECVRLVNQIAEDNWERFASEEMKM---LQGHLLRYPVKVEPDGKIVPLPDQECFPDVGGK 301 EC+R+VN A++ W ++++E L GHLL YP+ + +G++ L E FPD K Sbjct: 746 ECIRMVNATADELWGLYSAQEYPRNDDLPGHLLSYPISIGSNGEVTNLAGTEFFPDTNAK 805 Query: 300 ICGAPTS-LPDSLT 262 + G ++ LP LT Sbjct: 806 VVGEKSNYLPPILT 819
>PLDE1_ARATH (Q9C888) Phospholipase D epsilon (EC 3.1.4.4) (AtPLDepsilon) (PLD| epsilon) (PLDalpha3) Length = 762 Score = 42.4 bits (98), Expect = 6e-04 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Frame = -2 Query: 471 ECVRLVNQIAEDNWERFASEEM-KMLQGHLLRYPVKVEPDGKIVPLPDQECFPDVGGKIC 295 ECVR + I E WE ++ +++ ML HL+ YP+ V DG + + D CFPD + Sbjct: 691 ECVRGLRTIGEQMWEIYSGDKVVDMLGIHLVAYPISVTGDGAVEEVGD-GCFPDTKTLVK 749 Query: 294 GAPTSL-PDSLT 262 G + + P LT Sbjct: 750 GKRSKMFPPVLT 761
>IRS1_RAT (P35570) Insulin receptor substrate 1 (IRS-1) (pp185)| Length = 1235 Score = 33.9 bits (76), Expect = 0.22 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = -2 Query: 381 RYPVKVEPDGKIVPLPDQECFPDVGGKICGA 289 R+P +V+P+G ++ P C PD+GG C + Sbjct: 648 RHPQRVDPNGYMMMSPSGSCSPDIGGGSCSS 678
>A2AP_BOVIN (P28800) Alpha-2-antiplasmin precursor (Alpha-2-plasmin inhibitor)| (Alpha-2-PI) (Alpha-2-AP) Length = 492 Score = 33.5 bits (75), Expect = 0.28 Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 6/125 (4%) Frame = +1 Query: 7 MSKLSIDPVLSHVQT-VEKKILQRRTTLQHTVNSPCFPYTPHNV*STDYGAGYHHPLARQ 183 +S LS+ LSH+ + + LQR + H + PC P+ + D G G AR Sbjct: 109 LSPLSVALALSHLALGAQNQTLQRLKEVLHADSGPCLPHLLSRL-CQDLGPGAFRLAARM 167 Query: 184 DIQRGFT-----GEQNNQLGL*REVSTVTSHRQRIRKRGRGAADLATDVGEAFLVGQRDD 348 +Q+GF EQ+ QL + +S + + R + E FL DD Sbjct: 168 YLQKGFPIKEDFLEQSEQLFGAKPMSLTGMKGEDLANINRWVKEATEGKIEDFLSDLPDD 227 Query: 349 LTIRL 363 + L Sbjct: 228 TVLLL 232
>IRS1_MOUSE (P35569) Insulin receptor substrate 1 (IRS-1)| Length = 1233 Score = 31.6 bits (70), Expect = 1.1 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = -2 Query: 381 RYPVKVEPDGKIVPLPDQECFPDVGG 304 R+P +V+P+G ++ P C PD+GG Sbjct: 648 RHPQRVDPNGYMMMSPSGSCSPDIGG 673
>IRS1_HUMAN (P35568) Insulin receptor substrate 1 (IRS-1)| Length = 1242 Score = 31.6 bits (70), Expect = 1.1 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = -2 Query: 381 RYPVKVEPDGKIVPLPDQECFPDVGGKICGAPTSLPDSLTM*RHGTDF 238 R+P +V+P+G ++ P C PD+G G P+S S GT + Sbjct: 652 RHPQRVDPNGYMMMSPSGGCSPDIG----GGPSSSSSSSNAVPSGTSY 695
>RL33_AQUAE (O67756) 50S ribosomal protein L33| Length = 50 Score = 31.2 bits (69), Expect = 1.4 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Frame = +3 Query: 36 VSCTDCRKKNLTKAHNSTTHREQPVLSLYATQC---VIHR 146 ++CT+C+++N T N H E+ L Y C IHR Sbjct: 8 LACTECKRRNYTTTKNKQKHPERLELRKYCKWCRKHTIHR 47
>IRS1_CERAE (Q28224) Insulin receptor substrate 1 (IRS-1)| Length = 1251 Score = 30.8 bits (68), Expect = 1.8 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = -2 Query: 381 RYPVKVEPDGKIVPLPDQECFPDVGG 304 R+P +V+P+G ++ P C PD+GG Sbjct: 652 RHPQRVDPNGYMMMSPSGGCSPDIGG 677
>YIL7_YEAST (P40476) Hypothetical 34.7 kDa protein in RHO3-HIS5 intergenic| region Length = 318 Score = 29.3 bits (64), Expect = 5.3 Identities = 23/88 (26%), Positives = 39/88 (44%) Frame = +2 Query: 209 SKITSLDSEEKSVP*RHIVSESGSEVGAPQILPPTSGKHSWSGSGTILPSGSTFTGYLRR 388 S ITS+ S S+P ++S S S P I PP+ + + +P+G+ F Sbjct: 28 STITSVASSSSSLP---LLSNSTSSSIIPSITPPSRNGNPYILDSGDMPNGTVF------ 78 Query: 389 CPCNIFISSDANLSQLSSAIWFTNRTHS 472 I + A + L+ +W+ T+S Sbjct: 79 ----IVVGGIAGVIFLAILLWWVITTYS 102
>ROR2_MOUSE (Q9Z138) Tyrosine-protein kinase transmembrane receptor ROR2| precursor (EC 2.7.10.1) (Neurotrophic tyrosine kinase, receptor-related 2) (mROR2) Length = 944 Score = 29.3 bits (64), Expect = 5.3 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +2 Query: 293 PQILPPTSGKHSWSGSGTILPSGSTFTGYLRRCPCNIFISSDANL 427 PQ++P S HS SGS T TGY+ P N ++ A L Sbjct: 853 PQMVPKPSSHHSGSGS--------TSTGYVTTAPSNTSVADRAAL 889
>ADRB3_HUMAN (P13945) Beta-3 adrenergic receptor (Beta-3 adrenoceptor) (Beta-3| adrenoreceptor) Length = 408 Score = 29.3 bits (64), Expect = 5.3 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = -2 Query: 420 ASEEMKMLQGHLLRYPVKVEPDG---KIVPLPDQECFPDVGGKICG 292 A+ ++++L+G L R+P + P + P P C P G CG Sbjct: 231 ATRQLRLLRGELGRFPPEESPPAPSRSLAPAPVGTCAPPEGVPACG 276
>MMHB_AGKHA (Q9YI92) Mamushigin beta chain precursor| Length = 146 Score = 28.9 bits (63), Expect = 6.9 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 8/49 (16%) Frame = -1 Query: 193 SECLVLPTDDDNLHRNLWIT--HCVAYRE------STGCSRCVVELCAF 71 +EC+V TD L N WIT C+A + S CSR +C F Sbjct: 96 NECMVEWTDGTRLSHNAWITESECIAAKTTDNQWLSRPCSRTYNVVCKF 144
>ZAN_MOUSE (O88799) Zonadhesin precursor| Length = 5376 Score = 28.5 bits (62), Expect = 9.1 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 3/25 (12%) Frame = -3 Query: 242 TSLQSPSWLFCS---PVKPL*MSCL 177 T+LQ P+W CS P+KP + C+ Sbjct: 2272 TALQGPAWAHCSSRVPIKPFLLKCM 2296
>ROR2_HUMAN (Q01974) Tyrosine-protein kinase transmembrane receptor ROR2| precursor (EC 2.7.10.1) (Neurotrophic tyrosine kinase, receptor-related 2) Length = 943 Score = 28.5 bits (62), Expect = 9.1 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +2 Query: 293 PQILPPTSGKHSWSGSGTILPSGSTFTGYLRRCPCNIFISSDANL 427 PQ++P S HS SGS T TGY+ P N ++ A L Sbjct: 853 PQMVPKPSSHHSGSGS--------TSTGYVTTAPSNTSMADRAAL 889 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,897,141 Number of Sequences: 219361 Number of extensions: 1498286 Number of successful extensions: 4454 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 4293 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4445 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
