>SPY_HORVU (O82422) Probable UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-)
           (HvSPY)
          Length = 944

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -3

Query: 408 HSPSGRCEANGHSSR 364
           HSPSGRCEANGHSSR
Sbjct: 930 HSPSGRCEANGHSSR 944

>GCM_DROME (Q27403) Transcription factor glial cells missing (Protein glide)|
          Length = 504

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
 Frame = +2

Query: 197 CYKSGVTSVSQPHTPVSEVNNRNTYID---PQQRLTSMAHLELYSNQCMPASME--HPIG 361
           CY +G+ S    H+P+S  ++  +Y     PQQ   S    +L   Q +P S +   PI 
Sbjct: 296 CYANGMYSYDMLHSPLSAHSSTGSYYQENKPQQLQHSQYQQQLSPQQHVPVSYDPSQPIS 355

Query: 362 HRLLCPFASH 391
             L C   S+
Sbjct: 356 SSLQCGMPSY 365

>B4GT3_RAT (Q6P768) Beta-1,4-galactosyltransferase 3 (EC 2.4.1.-)|
           (Beta-1,4-GalTase 3) (Beta4Gal-T3) (b4Gal-T3)
           (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 3) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 3) [Includes: N-a
          Length = 395

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 290 VAAGGQYRCCGC*PRKREYVVVKH 219
           V +GG+YR  GC PR R  ++V H
Sbjct: 110 VESGGRYRPAGCEPRSRTAIIVPH 133

>B4GT3_MOUSE (Q91YY2) Beta-1,4-galactosyltransferase 3 (EC 2.4.1.-)|
           (Beta-1,4-GalTase 3) (Beta4Gal-T3) (b4Gal-T3)
           (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 3) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 3) [Includes: N
          Length = 395

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 290 VAAGGQYRCCGC*PRKREYVVVKH 219
           V +GG+YR  GC PR R  ++V H
Sbjct: 110 VESGGRYRPAGCEPRSRTAIIVPH 133

>B4GT3_PONPY (Q5NVN3) Beta-1,4-galactosyltransferase 3 (EC 2.4.1.-)|
           (Beta-1,4-GalTase 3) (Beta4Gal-T3) (b4Gal-T3)
           (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 3) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 3) [Includes: N
          Length = 393

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 290 VAAGGQYRCCGC*PRKREYVVVKH 219
           V  GG+YR  GC PR R  ++V H
Sbjct: 108 VEPGGRYRPAGCEPRSRTAIIVPH 131

>B4GT3_HUMAN (O60512) Beta-1,4-galactosyltransferase 3 (EC 2.4.1.-)|
           (Beta-1,4-GalTase 3) (Beta4Gal-T3) (b4Gal-T3)
           (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 3) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 3) [Includes: N
          Length = 393

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 290 VAAGGQYRCCGC*PRKREYVVVKH 219
           V  GG+YR  GC PR R  ++V H
Sbjct: 108 VEPGGRYRPAGCEPRSRTAIIVPH 131

>JHD2C_MOUSE (Q69ZK6) Probable JmjC domain-containing histone demethylation|
           protein 2C (EC 1.14.11.-) (Jumonji domain-containing
           protein 1C)
          Length = 2350

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 32/98 (32%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
 Frame = +3

Query: 99  TWHILFTHTPDLQGGK*SSTNQTKHPPTNYITSATSQGSPVFHNHILP--FPRSTTATPI 272
           T H   T  P L  G   ST+QT  P  N     +    PV H H+LP   P   TA+ +
Sbjct: 572 THHPALTPGPHLLAG---STSQTPLPTINTHPLTSGPHHPVHHPHLLPTVLPGVPTAS-L 627

Query: 273 LTPSSDLHQWHISSYIVISVCLHQWSIPLVIGCCAHLL 386
           L     L   H SS   +++  HQ    L+     HLL
Sbjct: 628 LGGHPRLESAHASSLSHLALA-HQQQQQLLQHQSPHLL 664

>NOS2_RAT (Q06518) Nitric oxide synthase, inducible (EC 1.14.13.39) (NOS type|
           II) (Inducible NO synthase) (Inducible NOS) (iNOS)
          Length = 1147

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
 Frame = +3

Query: 102 WHILF---THTPDLQGGK*SSTNQTKHPPTNYITSATSQGSPVFHNHILPFPRSTTATPI 272
           W  LF   ++  DL+  K  + N  K P    I S T+Q  P  H H   FP+  T T  
Sbjct: 5   WKFLFRVKSYQGDLKEEKDINNNVEKTPGA--IPSPTTQDDPKSHKHQNGFPQFLTGTAQ 62

Query: 273 LTPSSDLHQWHIS 311
             P S L + H++
Sbjct: 63  NVPES-LDKLHVT 74

>MGP_RAT (P08494) Matrix Gla-protein precursor (MGP)|
          Length = 103

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 194 ICYKSGVTSVSQPHTPVSEVNNRNTYIDPQQR 289
           +CY+S  +  S   +P +   N NT+I PQQR
Sbjct: 18  LCYESHESMESYEVSPFTTRRNANTFISPQQR 49

>TOLB_CHLMU (Q9PJE1) Protein tolB precursor|
          Length = 426

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
 Frame = +3

Query: 105 HILFTHTPDLQGGK----*SSTNQTKHPPTNYITSATSQGSPVFHNHILPFPRSTTATPI 272
           H L THTP +  GK      STN ++      + S    G      H+ P     + +  
Sbjct: 127 HFLLTHTPGISSGKIIFSLCSTNSSEELKQGELWSVDYDG-----QHLAPLTNEHSLS-- 179

Query: 273 LTPSSDLHQWHISSYIVIS 329
           +TP+  +H  HI +YI +S
Sbjct: 180 VTPAW-MHISHIPAYIYVS 197

>YSE2_CAEEL (Q09936) Hypothetical protein C53C9.2 in chromosome X|
          Length = 397

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +2

Query: 203 KSGVTSVSQPHTPVSEVNNRNTYIDPQQRLTSMAHLELYSNQCMPASMEHPIG-HRLLCP 379
           + G+T+V  P   +++ + +  YI P QR  ++  ++  +NQ      E PIG  R   P
Sbjct: 41  QKGMTAVGMPRWNITK-DKKQGYIAPDQRSENVLRVQCGTNQYASQKGETPIGASRFQVP 99

Query: 380 FASHLPEGE 406
             ++  E E
Sbjct: 100 KVTYKKEWE 108

>IF3A_YEAST (P38249) Eukaryotic translation initiation factor 3 110 kDa subunit|
           (eIF3 p110) (Translation initiation factor eIF3, p110
           subunit) (eIF3a)
          Length = 964

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 206 SGVTSVSQPHTPVSEVNNRNTYIDPQQRLTSMAHLELYSNQCMPASME 349
           S  T  SQ   P+ +V  R  ++   Q+ T+++  ELY    +PA ++
Sbjct: 412 SSKTYFSQYIAPLRDVIMRRVFVAASQKFTTVSQSELYKLATLPAPLD 459

>MGP_PIG (Q8MJ39) Matrix Gla-protein precursor (MGP)|
          Length = 103

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +2

Query: 194 ICYKSGVTSVSQPHTPVSEVNNRNTYIDPQQRLTSMA 304
           +CY+S  +  S    P     N NT+I PQQR  + A
Sbjct: 18  LCYESHESLESYEINPFLNRRNANTFISPQQRWRAKA 54

>MGP_HUMAN (P08493) Matrix Gla-protein precursor (MGP)|
          Length = 103

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 194 ICYKSGVTSVSQPHTPVSEVNNRNTYIDPQQR 289
           +CY+S  +  S    P     N NT+I PQQR
Sbjct: 18  LCYESHESMESYELNPFINRRNANTFISPQQR 49

>MGP_CHILA (Q6QN06) Matrix Gla-protein precursor (MGP)|
          Length = 103

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 194 ICYKSGVTSVSQPHTPVSEVNNRNTYIDPQQRLTSMA 304
           +CY+S  +  S   +P     N NT++ PQQR  + A
Sbjct: 18  VCYESHESMESYEISPFLNRRNANTFMSPQQRWRAKA 54

>Y589_MYCPN (Q50338) Hypothetical protein MPN589 (D02_orf157L)|
          Length = 157

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 19/74 (25%), Positives = 32/74 (43%)
 Frame = +3

Query: 81  FYHANSTWHILFTHTPDLQGGK*SSTNQTKHPPTNYITSATSQGSPVFHNHILPFPRSTT 260
           + + N  + +  T T DL GG   S    +    + I SA ++   V +  +LP P+   
Sbjct: 84  YEYKNHGYGLALTDT-DLLGGSSGSLVFNQDKKISSIYSAATESDSVGYAQLLPVPKDVN 142

Query: 261 ATPILTPSSDLHQW 302
              ++  S DL  W
Sbjct: 143 GVSLVKYSYDLILW 156

>AMYI_SACDI (P29760) Glucoamylase S2 precursor (EC 3.2.1.3) (Glucan|
           1,4-alpha-glucosidase) (1,4-alpha-D-glucan
           glucohydrolase) (GAII)
          Length = 768

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +3

Query: 114 FTHTPDLQGGK*SSTNQTKHPPTNYITSATSQGSPVFHNHILPFPRSTTATPILTPSS 287
           +  T   QGG+ ++T  TK+ PT Y+T+     S     +  P   +TT     T S+
Sbjct: 163 YASTSTKQGGEITTTFVTKNIPTTYLTTIAPTSSVTTVTNFTPTTITTTVCSTGTNSA 220

>MGP_RABIT (P47841) Matrix Gla-protein precursor (MGP)|
          Length = 103

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +2

Query: 194 ICYKSGVTSVSQPHTPVSEVNNRNTYIDPQQRLTSMAHLELYSNQCMPA 340
           +CY+S  +  S    P     N NT++ PQQR  + A  E    Q  PA
Sbjct: 18  LCYESHESMESYEINPFINRRNANTFMSPQQRWMAKAQ-ERVREQRKPA 65

>MGP_MOUSE (P19788) Matrix Gla-protein precursor (MGP)|
          Length = 104

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 194 ICYKSGVTSVSQPHTPVSEVNNRNTYIDPQQRLTSMA 304
           +CY+S  +  S   +P     N NT++ PQQR  + A
Sbjct: 18  LCYESHESMESYEISPFINRRNANTFMSPQQRWRAKA 54

>LEUK_MOUSE (P15702) Leukosialin precursor (Leucocyte sialoglycoprotein)|
           (Sialophorin) (Ly-48) (B cell differentiation antigen
           LP-3) (CD43 antigen)
          Length = 395

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 150 SSTNQTKHPPTNYITSATSQGSPVFHNHILPFPRSTTATPILTPSSDLH 296
           +S+N+T  P      S+ + G PV           TTAT  L PSS++H
Sbjct: 164 TSSNETSGPSVATTVSSKTSGPPV-----------TTATGSLGPSSEMH 201

>RON_HUMAN (Q04912) Macrophage-stimulating protein receptor precursor (EC|
           2.7.10.1) (MSP receptor) (p185-Ron) (CDw136 antigen)
           [Contains: Macrophage-stimulating protein receptor alpha
           chain; Macrophage-stimulating protein receptor beta
           chain]
          Length = 1400

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 36  SRSCSYIYNQRLSLCFYHANSTWHILFT 119
           S +C YI N  +++C  H  S WH++ +
Sbjct: 776 SPNCGYI-NSHITICGQHLTSAWHLVLS 802

>INLA_LISMO (P25146) Internalin A precursor|
          Length = 800

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +2

Query: 236 TPVSEVNNRNTYIDPQQRLTSMAHLELYSN 325
           T ++  NN+ T IDP + LT++  LEL SN
Sbjct: 145 TGLTLFNNQITDIDPLKNLTNLNRLELSSN 174

>INLA_LISMF (Q723K6) Internalin A precursor|
          Length = 800

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +2

Query: 236 TPVSEVNNRNTYIDPQQRLTSMAHLELYSN 325
           T ++  NN+ T IDP + LT++  LEL SN
Sbjct: 145 TGLTLFNNQITDIDPLKNLTNLNRLELSSN 174

>AROF_STRCO (P80574) Phospho-2-dehydro-3-deoxyheptonate aldolase (EC 2.5.1.54)|
           (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP
           synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate
           synthase)
          Length = 449

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 18/66 (27%), Positives = 30/66 (45%)
 Frame = +2

Query: 173 SPHELYYICYKSGVTSVSQPHTPVSEVNNRNTYIDPQQRLTSMAHLELYSNQCMPASMEH 352
           S HE   + Y+S +T V      + +V+    +I  + R    AH+E  S       + +
Sbjct: 234 SSHEALLLDYESALTRVDSRTGQLYDVSGHMVWIGERTRQLDHAHIEFASR------IRN 287

Query: 353 PIGHRL 370
           PIG +L
Sbjct: 288 PIGIKL 293

>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/59 (28%), Positives = 25/59 (42%)
 Frame = +3

Query: 105 HILFTHTPDLQGGK*SSTNQTKHPPTNYITSATSQGSPVFHNHILPFPRSTTATPILTP 281
           H+  T +P  +G +         PPT+     T Q SP+   H+ P PR     P  +P
Sbjct: 211 HVQPTPSPPSRGHQPQPPTHRHAPPTHRHAPPTHQPSPL--RHLPPSPRRQPQPPTYSP 267

>PGPLA_DROME (Q95T64) Peptidoglycan-recognition protein-LA|
          Length = 368

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 19/76 (25%), Positives = 36/76 (47%)
 Frame = +3

Query: 132 LQGGK*SSTNQTKHPPTNYITSATSQGSPVFHNHILPFPRSTTATPILTPSSDLHQWHIS 311
           LQG + +S  Q  H  T+  +S +S G        LP P++    P + PSS ++  H +
Sbjct: 17  LQGRQRASPAQRLHNLTSAGSSTSSSG--------LPLPQNIFTNPAIQPSSVINLNHST 68

Query: 312 SYIVISVCLHQWSIPL 359
             ++  +  +Q  + +
Sbjct: 69  DVVIGPMTQYQGPVSI 84

>YNDA_BACSU (O31805) Hypothetical protein yndA precursor|
          Length = 132

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -1

Query: 404 PLPGDAKQMGTAADDQWDAPLMQAYTDYYIARDVPLM*VAAGGQYRCC 261
           PL   A++ GTA   +WD   +  YT  Y +  V     + GG +R C
Sbjct: 20  PLTAQAEKAGTAGAGEWDK--LGTYTYTYSSPTV----YSTGGDFRVC 61

>BGAL_BACHD (Q9K9C6) Beta-galactosidase (EC 3.2.1.23) (Lactase)|
          Length = 1014

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 386  KQMGTAADDQWDAPLMQAY 330
            KQMG   DD W AP+   Y
Sbjct: 979  KQMGVGGDDSWGAPVHDEY 997

>TPSN_CANFA (Q5TJE4) Tapasin precursor (TPSN) (TPN) (TAP-binding protein)|
          Length = 449

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 82  STMPTQLGIYSLLIHLTYRGVNKALQIRLSIPPRIIL 192
           +  P Q G Y   +HL Y     AL++ +  PP+I L
Sbjct: 260 AVQPFQEGTYLATVHLPYLQGQVALELSVQKPPKISL 296

>PACC_ASPOR (Q9HFB3) pH-response transcription factor pacC/RIM101|
          Length = 662

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 177 PTNYITSATSQGSPVFHNHILPFPRSTTATPILTPSSDLHQW 302
           P ++ T+ TS G P+  N   P   S T TP LTP S    +
Sbjct: 386 PPSHATATTSAG-PIMAN---PATHSPTGTPALTPPSSAQSY 423

>CLD3_HUMAN (O15551) Claudin-3 (Clostridium perfringens enterotoxin receptor 2)|
           (CPE-receptor 2) (CPE-R 2) (Ventral prostate.1 protein
           homolog) (HRVP1)
          Length = 220

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 281 GGQYRCCGC*PRKREYVVVK 222
           GG   CC C PR+++Y   K
Sbjct: 176 GGALLCCSCPPREKKYTATK 195

>E135_ARATH (Q9M088) Putative glucan endo-1,3-beta-glucosidase 5 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 484

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 112 SLLIHLTYRGVNKALQIRLSIPPRIILHLLQVRGHQ 219
           SLLI +   GVN   Q R  +PP  ++ LL+  G Q
Sbjct: 19  SLLIEVEGIGVNWGSQARHPLPPATVVRLLRENGIQ 54

>AMYH_SACDI (P04065) Glucoamylase S1 precursor (EC 3.2.1.3) (Glucan|
           1,4-alpha-glucosidase) (1,4-alpha-D-glucan
           glucohydrolase) (GAI)
          Length = 767

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +3

Query: 123 TPDLQGGK*SSTNQTKHPPTNYITSATSQGSPVFHNHILPFPRSTTATPILTPSS 287
           T   QGG+ ++T  TK+ PT Y+T+     S     +  P   +TT     T S+
Sbjct: 165 TSTKQGGEITTTFVTKNIPTTYLTTIAPTSSVTTVTNFTPTTITTTVCSTGTNSA 219


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,987,360
Number of Sequences: 219361
Number of extensions: 1398073
Number of successful extensions: 3281
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3278
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)