>gb|AF035820.1|AF035820 Hordeum vulgare gibberellin action negative regulator SPY mRNA,
            complete cds
          Length = 3290

 Score =  813 bits (410), Expect = 0.0
 Identities = 410/410 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    agaagttgaaatagcctcagttaaattttagagaatctagaagctgttcctacatataca 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3272 agaagttgaaatagcctcagttaaattttagagaatctagaagctgttcctacatataca 3213

                                                                        
Query: 61   accaacgcctttctctctgtttctaccatgccaactcaacttggcatatactctttactc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3212 accaacgcctttctctctgtttctaccatgccaactcaacttggcatatactctttactc 3153

                                                                        
Query: 121  atacacctgacctacaggggggtaaataaagctctacaaatcagactaagcatcccccca 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3152 atacacctgacctacaggggggtaaataaagctctacaaatcagactaagcatcccccca 3093

                                                                        
Query: 181  cgaattatattacatctgctacaagtcaggggtcaccagtgtttcacaaccacatactcc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3092 cgaattatattacatctgctacaagtcaggggtcaccagtgtttcacaaccacatactcc 3033

                                                                        
Query: 241  cgtttccgaggtcaacaaccgcaacacctatattgacccccagcagcgacttacatcaat 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3032 cgtttccgaggtcaacaaccgcaacacctatattgacccccagcagcgacttacatcaat 2973

                                                                        
Query: 301  ggcacatctcgagctatatagtaatcagtgtatgcctgcatcaatggagcatcccattgg 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2972 ggcacatctcgagctatatagtaatcagtgtatgcctgcatcaatggagcatcccattgg 2913

                                                              
Query: 361  tcatcggctgctgtgcccatttgcttcgcatctcccggaaggggagtgcg 410
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2912 tcatcggctgctgtgcccatttgcttcgcatctcccggaaggggagtgcg 2863

>gb|DQ013806.1| Phyllostachys praecox SPY mRNA, partial cds
          Length = 2766

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 352  tcccattggtcatcggctgctgtgcccatttgcttcgcatct 393
            ||||| ||||||||||||||| |||||||||||||| |||||
Sbjct: 2357 tcccactggtcatcggctgctatgcccatttgcttcacatct 2316

>emb|AL355578.4| Human DNA sequence from clone RP11-29P20 on chromosome 13q31.1-31.3
             Contains part of a novel gene and a CpG island, complete
             sequence
          Length = 157949

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1     agaagttgaaatagcctcagtt 22
             ||||||||||||||||||||||
Sbjct: 38184 agaagttgaaatagcctcagtt 38163

>gb|AC004414.1| Homo sapiens PAC clone RP4-724E13 from 7, complete sequence
          Length = 115045

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 25    attttagagaatctagaagct 45
             |||||||||||||||||||||
Sbjct: 84389 attttagagaatctagaagct 84369

>gb|AC146208.2| Pan troglodytes BAC clone RP43-34A11 from 7, complete sequence
          Length = 169225

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 25     attttagagaatctagaagct 45
              |||||||||||||||||||||
Sbjct: 153878 attttagagaatctagaagct 153898

>emb|BX005355.10| Zebrafish DNA sequence from clone CH211-222M2, complete sequence
          Length = 227182

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 7     tgaaatagcctcagttaaattttagagaa 35
             ||||||||||| ||||||||| |||||||
Sbjct: 34307 tgaaatagccttagttaaattatagagaa 34279

>ref|XM_483767.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3547

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 352  tcccattggtcatcggctgctgtgcccatttgcttc 387
            |||| ||||||| |||||  ||||||||||||||||
Sbjct: 3125 tccccttggtcaccggcttatgtgcccatttgcttc 3090

>ref|XM_423605.1| PREDICTED: Gallus gallus similar to 26S protease regulatory subunit
           6B (TAT-binding protein-7) (TBP-7) (LOC425916), partial
           mRNA
          Length = 473

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 348 agcatcccattggtcatcgg 367
           ||||||||||||||||||||
Sbjct: 325 agcatcccattggtcatcgg 344

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 65       acgcctttctctctgtttct 84
                ||||||||||||||||||||
Sbjct: 18902701 acgcctttctctctgtttct 18902682

>gb|AC087558.13| Mus musculus strain C57BL/6J chromosome 2 clone rp23-282p18, complete
              sequence
          Length = 217766

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     ttaaattttagagaatctag 40
              ||||||||||||||||||||
Sbjct: 108250 ttaaattttagagaatctag 108231

>dbj|AK087184.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched
            library, clone:E030032M22 product:unclassifiable, full
            insert sequence
          Length = 2935

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   ttaaattttagagaatctag 40
            ||||||||||||||||||||
Sbjct: 2868 ttaaattttagagaatctag 2849

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 352      tcccattggtcatcggctgctgtgcccatttgcttc 387
                |||| ||||||| |||||  ||||||||||||||||
Sbjct: 27991626 tccccttggtcaccggcttatgtgcccatttgcttc 27991591

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 65       acgcctttctctctgtttct 84
                ||||||||||||||||||||
Sbjct: 18896742 acgcctttctctctgtttct 18896723

>gb|AC135560.4| Oryza sativa chromosome 3 BAC OSJNBa0031I04 genomic sequence, complete
             sequence
          Length = 168859

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    acgcctttctctctgtttct 84
             ||||||||||||||||||||
Sbjct: 96940 acgcctttctctctgtttct 96959

>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0562A06
          Length = 154198

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 352   tcccattggtcatcggctgctgtgcccatttgcttc 387
             |||| ||||||| |||||  ||||||||||||||||
Sbjct: 69118 tccccttggtcaccggcttatgtgcccatttgcttc 69083

>dbj|AK065854.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041I06, full
            insert sequence
          Length = 3547

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 352  tcccattggtcatcggctgctgtgcccatttgcttc 387
            |||| ||||||| |||||  ||||||||||||||||
Sbjct: 3125 tccccttggtcaccggcttatgtgcccatttgcttc 3090


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,233,376
Number of Sequences: 3902068
Number of extensions: 3233376
Number of successful extensions: 58098
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58033
Number of HSP's gapped (non-prelim): 65
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)