ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl29h07 |
|---|---|
| Clone Library Name | barley_pub |
>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)| Length = 3969 Score = 34.7 bits (78), Expect = 0.11 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +1 Query: 127 PASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKT 288 P S SP N+ R R S+ S T +++ S PQ +S+PP P T Sbjct: 514 PISQSPENESNDRRSRRYSVSERSFGSRTTKKLSTLQSAPQQQTSSSPPPPLLT 567
>FGD6_MOUSE (Q69ZL1) FYVE, RhoGEF and PH domain-containing protein 6| Length = 1399 Score = 33.9 bits (76), Expect = 0.20 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = +1 Query: 184 TLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDKTALINNRPMPRKDQVHRCP 363 T P S TS T QP +P+ SAPP +++ +S R +P+K Q H P Sbjct: 434 TQPLSLPKQVTSACTDQPPATCNPEVSAPPIQKESSSS---------RIIPKKPQRHSLP 484 Query: 364 SA 369 +A Sbjct: 485 AA 486
>104K_THEPA (P15711) 104 kDa microneme-rhoptry antigen precursor (p104)| Length = 924 Score = 33.5 bits (75), Expect = 0.26 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 7/103 (6%) Frame = +1 Query: 100 QAPKSEDGN-----PASASPTNKIARSRDRHLDTLP-NSYQSSNTSYITSQPSVPQDPK- 258 +AP ++G+ P+ S ++K + P ++ S ++ +PS P+DPK Sbjct: 520 KAPGDKEGSEGHKGPSKGSDSSKEGKKPGSGKKPGPAREHKPSKIPTLSKKPSGPKDPKH 579 Query: 259 ASAPPTPRKTINSGDKTALINNRPMPRKDQVHRCPSARLQAAP 387 P PRK + +TA RP P+ Q+ + P + +P Sbjct: 580 PRDPKEPRK--SKSPRTASPTRRPSPKLPQLSKLPKSTSPRSP 620
>3BP1_HUMAN (Q9Y3L3) SH3 domain-binding protein 1 (3BP-1)| Length = 701 Score = 33.5 bits (75), Expect = 0.26 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 9/104 (8%) Frame = +1 Query: 103 APKSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPT-- 276 +PK P +A+P +AR R P + +S P+ P P + +P T Sbjct: 544 SPKVTRSPPETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQ 603 Query: 277 --PRKTINSGDKTALI-----NNRPMPRKDQVHRCPSARLQAAP 387 PR+ + S + + P P + Q R P++ A+P Sbjct: 604 ALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASP 647
>ATG1_USTMA (Q4P0K0) Serine/threonine-protein kinase ATG1 (EC 2.7.11.1)| (Autophagy-related protein 1) Length = 990 Score = 33.5 bits (75), Expect = 0.26 Identities = 22/74 (29%), Positives = 35/74 (47%) Frame = +1 Query: 76 LQQRYR*HQAPKSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDP 255 L+ R +PK+ G + NK R R TLP ++ + Y+T +P P+D Sbjct: 400 LESRSTQEASPKAITGETIAP---NKTPREDARPPRTLPRAFSAK---YVTGEPPQPEDL 453 Query: 256 KASAPPTPRKTINS 297 + PPT +T +S Sbjct: 454 EKRVPPTMTRTPSS 467
>HXA9_AMBME (P50209) Homeobox protein Hox-A9 (Fragment)| Length = 143 Score = 32.3 bits (72), Expect = 0.57 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 8/69 (11%) Frame = +1 Query: 196 SYQSSNTSYITSQPSVPQDPKASA---PPTPRKTINSGDKTALINNRPM-----PRKDQV 351 ++ SS+T ++ S P D ++S P P +T SGDK A+ N P R + Sbjct: 21 TFDSSHTLSLSDYGSSPADKQSSEGAFPEAPAETEASGDKPAIDPNNPAANWLHARSTRK 80 Query: 352 HRCPSARLQ 378 RCP + Q Sbjct: 81 KRCPYTKHQ 89
>HRX_MOUSE (P55200) Zinc finger protein HRX (ALL-1) (Fragment)| Length = 3866 Score = 32.3 bits (72), Expect = 0.57 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = +1 Query: 127 PASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTP 279 P S SP N+ R R S+ S T + + S PQ +S+PP P Sbjct: 412 PISQSPENESNDRRSRRYSMSERSFGSRATKKLPTLQSAPQQKTSSSPPPP 462
>ENAH_HUMAN (Q8N8S7) Protein enabled homolog| Length = 591 Score = 32.3 bits (72), Expect = 0.57 Identities = 15/58 (25%), Positives = 30/58 (51%) Frame = +1 Query: 178 LDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDKTALINNRPMPRKDQV 351 ++T + ++ +TS+ S P+ + P R +G K+ +I+ R PRK+Q+ Sbjct: 465 IETEQKEDKGEDSEPVTSKASSTSTPEPTRKPWERTNTMNGSKSPVISRRDSPRKNQI 522
>AKA12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor protein 250| kDa) (AKAP 250) (Myasthenia gravis autoantigen gravin) Length = 1781 Score = 32.0 bits (71), Expect = 0.74 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -3 Query: 451 TPEQQPDGATEASEPASEGGAWEQPAAEQMDTDEPDPSLA 332 +PEQ P+G++ +EP GG P+AE DP++A Sbjct: 11 SPEQPPEGSSTPAEPEPSGGG---PSAEAAPDTTADPAIA 47
>WBS14_HUMAN (Q9NP71) Williams-Beuren syndrome chromosome region 14 protein (WS| basic-helix-loop-helix leucine zipper protein) (WS-bHLH) (Mlx interactor) (MLX-interacting protein-like) Length = 852 Score = 31.6 bits (70), Expect = 0.97 Identities = 17/51 (33%), Positives = 29/51 (56%) Frame = +1 Query: 127 PASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTP 279 PAS++ T+ SR + ++ P SS ++++S +P+DPK PP P Sbjct: 342 PASSAMTHLSGHSRLQARNSCPGPLDSS--AFLSSDFLLPEDPKPRLPPPP 390
>MED15_YEAST (P19659) RNA polymerase II mediator complex subunit 15 (Galactose| metabolism protein 11) (Basal expression activator protein 1) (Autonomous replication regulatory protein 3) (Defective silencing suppressor protein 4) (Ty insertion suppressor Length = 1081 Score = 30.8 bits (68), Expect = 1.7 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Frame = +1 Query: 127 PASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQ----DPKASAPPTPRKTIN 294 P SA+ T + ++ ++ N SNT +TS PS + AS PTPR N Sbjct: 744 PVSAAATPSLNKT----INGKVNGRTKSNTIPVTSIPSTNKKLSISNAASQQPTPRSASN 799 Query: 295 SGDKTALINNRPMPRKDQ 348 + T N P P K Q Sbjct: 800 TAKSTP--NTNPSPLKTQ 815
>DREB_CHICK (P18302) Drebrin (Developmentally-regulated brain protein)| Length = 651 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = -3 Query: 451 TPEQQPDGATEASEPASEGGAWEQPAAE----QMDTDEPDP 341 TP+ P +T+ +EPA+ W P E + DEPDP Sbjct: 401 TPKDSPSPSTQVAEPAATEQHWPFPGPEDKAAEPPGDEPDP 441
>RCOR2_MOUSE (Q8C796) REST corepressor 2 (M-CoREST)| Length = 523 Score = 30.4 bits (67), Expect = 2.2 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Frame = +1 Query: 115 EDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQP-SVPQDPKASAPPT 276 +DG PA+ PT + R L + TS TS P SVP P PPT Sbjct: 390 QDGAPAAPVPTEEARRGAPVPATALEEDDEVQITSVSTSVPRSVPPAPPPPPPPT 444
>GRLF1_HUMAN (Q9NRY4) Glucocorticoid receptor DNA-binding factor 1 (Glucocorticoid| receptor repression factor 1) (GRF-1) (Rho GAP p190A) (p190-A) Length = 1513 Score = 30.0 bits (66), Expect = 2.8 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +1 Query: 223 ITSQPSVPQDPKASAPPTPRKTINSGDKTALINNRPMPR 339 +TSQPS PQ P PPTP+ + + L +RP P+ Sbjct: 1467 VTSQPSPPQSP----PPTPQSPMQPLLPSPLHPHRPTPQ 1501
>TAZ_DROME (Q9V6G5) Tafazzin homolog| Length = 378 Score = 30.0 bits (66), Expect = 2.8 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Frame = +1 Query: 130 ASASPTNKIARSRDRHLDTLPNSYQS-SNTSYITSQPSVPQDPKASAPPTPRKTINSGDK 306 A A P + +R + P S Q + + T + S P+D + +PPTP +T+NS Sbjct: 38 AMARPYVQAPEARPVPDERYPGSQQDRKDIATQTVRSSKPKDLRPPSPPTPSQTLNS--- 94 Query: 307 TALINNRPMPRKDQ 348 ++ P P DQ Sbjct: 95 ----SSLPPPMSDQ 104
>WNK1_MOUSE (P83741) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1)| (Protein kinase with no lysine 1) (Protein kinase, lysine-deficient 1) Length = 2377 Score = 30.0 bits (66), Expect = 2.8 Identities = 20/69 (28%), Positives = 27/69 (39%) Frame = +1 Query: 79 QQRYR*HQAPKSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPK 258 + R R H K G A+ +PT R D+ + + QPSVP Sbjct: 51 EYRRRRHTMDKDSRGAAATTTPTEHRFFRRSVICDSNATALELPGLPLSIPQPSVPAVVP 110 Query: 259 ASAPPTPRK 285 SAPP P + Sbjct: 111 QSAPPEPHR 119
>HEM2_SELMA (P45623) Delta-aminolevulinic acid dehydratase, chloroplast| precursor (EC 4.2.1.24) (Porphobilinogen synthase) (ALADH) (ALAD) Length = 417 Score = 30.0 bits (66), Expect = 2.8 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Frame = -1 Query: 426 PLKLVSRPVREVPGSSL----QPSRWTPMNLILPWHRPIVDQSSFISAIDCFSRCRW 268 PL+L SRP R ++L Q + TP N ILP ++ S I A+ SR W Sbjct: 89 PLRLTSRPRRNRKSAALRDAFQETTLTPANFILPLFIHEGEEDSPIGAMPGCSRLGW 145
>WNK1_RAT (Q9JIH7) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1)| (Protein kinase with no lysine 1) (Protein kinase, lysine-deficient 1) Length = 2126 Score = 30.0 bits (66), Expect = 2.8 Identities = 20/69 (28%), Positives = 27/69 (39%) Frame = +1 Query: 79 QQRYR*HQAPKSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPK 258 + R R H K G A+ +PT R D+ + + QPSVP Sbjct: 51 EYRRRRHTMDKDSRGAAATTTPTEHRFFRRSVICDSNATALELPGLPLSIPQPSVPAVVP 110 Query: 259 ASAPPTPRK 285 SAPP P + Sbjct: 111 QSAPPEPHR 119
>SPTA3_HUMAN (Q8NHX4) Spermatogenesis-associated protein 3 (Testis spermatocyte| apoptosis-related protein 1) (Testis and spermatogenesis cell-related protein 1) Length = 183 Score = 29.6 bits (65), Expect = 3.7 Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 3/76 (3%) Frame = +1 Query: 172 RHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDKTALINNRPMPRKDQV 351 RH D+ S++TS S S PQ P + P ++ + + P P + Sbjct: 13 RHRDSTSQHASSNSTSQQPSPESTPQQPSPESTP-QHSSLETTSRQPAFQALPAPEIRRS 71 Query: 352 HRC---PSARLQAAPR 390 C P A ++AAP+ Sbjct: 72 SCCLLSPDANVKAAPQ 87
>MLF3_YEAST (P32047) Protein MLF3 (Multicopy suppressor of leflunomide| sensitivity 3) Length = 452 Score = 29.6 bits (65), Expect = 3.7 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 3/98 (3%) Frame = +1 Query: 106 PKSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRK 285 P SE + ASP K++RS T P +NT T+ + + + + Sbjct: 175 PSSES---SPASPDLKLSRSHSHSAATRPTLNNINNTGMTTTTSNGEPNSRILRFYSYVD 231 Query: 286 TINSGDKTALINNRPM---PRKDQVHRCPSARLQAAPR 390 +N +K A NN P P K Q + CP ++ P+ Sbjct: 232 MLND-EKLAQANNTPTSRPPMKSQAYSCPFILKRSPPQ 268
>YTFB_ECOLI (P39310) Hypothetical protein ytfB| Length = 212 Score = 29.3 bits (64), Expect = 4.8 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Frame = -3 Query: 451 TPEQQPDG-ATEASEPASEGGAWEQPAAEQMDTDEPDPSL 335 TP+ PD A A EP EG EQP Q +PD + Sbjct: 85 TPQNDPDQVAPVAPEPIQEGQPEEQPQTTQTQPFQPDSGI 124
>GTI1_SCHPO (O14367) Gluconate transport inducer 1| Length = 720 Score = 29.3 bits (64), Expect = 4.8 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 9/71 (12%) Frame = +1 Query: 190 PNSYQSSN--TSYITSQPSVPQDPKASAPPTPRKTINSGDKTALINNR-PMPRKD----- 345 P+S+ S +S T P VP+ P +S+P T + N+ +A IN R P R++ Sbjct: 190 PSSFSSLPLVSSKPTGTPFVPKSPPSSSPSTTNVS-NASTSSAPINPRAPQTRRESISST 248 Query: 346 -QVHRCPSARL 375 +H C S+ L Sbjct: 249 SSIHYCSSSSL 259
>GAOX3_ARATH (Q39112) Gibberellin 20 oxidase 3 (EC 1.14.11.-) (Gibberellin C-20| oxidase 3) (GA 20-oxidase 3) Length = 380 Score = 29.3 bits (64), Expect = 4.8 Identities = 13/58 (22%), Positives = 26/58 (44%) Frame = -1 Query: 453 KHRSSSQMVPLKLVSRPVREVPGSSLQPSRWTPMNLILPWHRPIVDQSSFISAIDCFS 280 K + S + KL+++ +P + P P + P P++D + F+S C + Sbjct: 17 KTKEDSSIFDAKLLNQHSHHIPQQFVWPDHEKPSTDVQPLQVPLIDLAGFLSGDSCLA 74
>HM30_CAEEL (Q22909) Homeobox protein ceh-30| Length = 299 Score = 29.3 bits (64), Expect = 4.8 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = +1 Query: 130 ASASPTNKIARSRD-RHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDK 306 AS SP NKI+ S R D L S +N+S+ PQ K+ +PR + GD+ Sbjct: 90 ASTSPCNKISSSSSFRISDILEQS--PNNSSHSNDHDPSPQSIKSDFSTSPRASSPGGDR 147
>NRG2_HUMAN (O14511) Pro-neuregulin-2, membrane-bound isoform precursor| (Pro-NRG2) [Contains: Neuregulin-2 (NRG-2) (Neural- and thymus-derived activator for ERBB kinases) (NTAK) (Divergent of neuregulin-1) (DON-1)] Length = 850 Score = 28.9 bits (63), Expect = 6.3 Identities = 16/51 (31%), Positives = 28/51 (54%) Frame = +1 Query: 130 ASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPR 282 +S+S + + + S ++ +S SSN S I S+P+ P +P+ P PR Sbjct: 25 SSSSSSERSSSSSSSSSESGSSSRSSSNNSSI-SRPAAPPEPRPQQQPQPR 74
>RBBP6_HUMAN (Q7Z6E9) Retinoblastoma-binding protein 6 (p53-associated cellular| protein of testis) (Proliferation potential-related protein) (Protein P2P-R) (Retinoblastoma-binding Q protein 1) (Protein RBQ-1) Length = 1792 Score = 28.9 bits (63), Expect = 6.3 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 6/85 (7%) Frame = +1 Query: 112 SEDGNPASASPTNKIARSRDRHLDTLPNS------YQSSNTSYITSQPSVPQDPKASAPP 273 +E GN S S ++K AR+ D+H T +S + T Y T + S + Sbjct: 1435 NEQGNFKSLSQSSKEARTSDKHDSTRASSNKDFTPNRDKKTDYDTREYSSSKRRDEKNEL 1494 Query: 274 TPRKTINSGDKTALINNRPMPRKDQ 348 T RK S +K + + PR+++ Sbjct: 1495 TRRKDSPSRNKDSASGQKNKPREER 1519
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 28.9 bits (63), Expect = 6.3 Identities = 27/95 (28%), Positives = 39/95 (41%) Frame = +1 Query: 103 APKSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPR 282 AP+ +PA A P+ + DR P++ + + QP+ P P + PR Sbjct: 70 APRPSAPSPAQAGPSQAAPAAGDRAAAPRPSAAPKAPAA---QQPAAPSAPAPAPSQGPR 126 Query: 283 KTINSGDKTALINNRPMPRKDQVHRCPSARLQAAP 387 T G K A RP P + P+A AAP Sbjct: 127 PT--PGPKPA---PRPAPAAPEFTAPPAA--PAAP 154
>AB1IP_HUMAN (Q7Z5R6) Amyloid beta A4 precursor protein-binding family B member| 1-interacting protein (APBB1-interacting protein 1) (Rap1-GTP-interacting adapter molecule) (RIAM) (Proline-rich EVH1 ligand 1) (PREL-1) (Proline-rich protein 73) (Retinoic ac Length = 666 Score = 28.9 bits (63), Expect = 6.3 Identities = 12/51 (23%), Positives = 22/51 (43%) Frame = +1 Query: 127 PASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTP 279 P + + + + RH +T + + + + P P PK+S PP P Sbjct: 470 PQATHSVSAVLQEAQRHAETSKDKKPALGNHHDPAVPRAPHAPKSSLPPPP 520
>SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150) (Fragment) Length = 1324 Score = 28.9 bits (63), Expect = 6.3 Identities = 19/58 (32%), Positives = 24/58 (41%) Frame = +1 Query: 100 QAPKSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPP 273 +AP G PAS S +DTLP + S T +P P P+ APP Sbjct: 1070 RAPSRTPGPPASQSSP----------VDTLPATQLQQKDSSQTLEPKRPPPPRPVAPP 1117
>Y311_SHEON (Q8EJZ5) UPF0313 protein SO0311| Length = 786 Score = 28.9 bits (63), Expect = 6.3 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -3 Query: 445 EQQPDGATEASEPASEGGAWEQPAAEQMDTDEPD 344 EQ P A +P + G W P A ++TDE D Sbjct: 316 EQNPGCARALFQPHGDRGVWVNPPAWPLNTDEMD 349
>RIMS2_RAT (Q9JIS1) Regulating synaptic membrane exocytosis protein 2| (Rab3-interacting molecule 2) (RIM 2) Length = 1555 Score = 28.9 bits (63), Expect = 6.3 Identities = 20/65 (30%), Positives = 28/65 (43%) Frame = +1 Query: 196 SYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDKTALINNRPMPRKDQVHRCPSARL 375 SY T Q S PQ +PPTPR++ D+ L R + Q H PS+ + Sbjct: 409 SYSMERTREAQGQSSYPQRTTNHSPPTPRRSPIPLDRPEL--RRADSLRKQHHLDPSSAV 466 Query: 376 QAAPR 390 + R Sbjct: 467 RKTKR 471
>HEX3_ADEM1 (O10438) Peripentonal hexon-associated protein (Protein IIIA)| Length = 494 Score = 28.9 bits (63), Expect = 6.3 Identities = 10/20 (50%), Positives = 16/20 (80%) Frame = -3 Query: 403 SEGGAWEQPAAEQMDTDEPD 344 +E GAW +P AEQ++ +EP+ Sbjct: 411 TEDGAWSRPLAEQVNEEEPN 430
>D7_XENLA (P13007) Protein D7| Length = 278 Score = 28.9 bits (63), Expect = 6.3 Identities = 17/67 (25%), Positives = 29/67 (43%) Frame = +1 Query: 142 PTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDKTALIN 321 P N + + + + P + SS +Y DP++ PP P++ +G K A N Sbjct: 143 PMNSVMQVKQNQPE--PEPFTSSERNY---------DPRSKEPPNPKQPAVNGYKPATTN 191 Query: 322 NRPMPRK 342 P R+ Sbjct: 192 TNPWCRQ 198
>ZN553_HUMAN (Q96MX3) Zinc finger protein 553| Length = 618 Score = 28.9 bits (63), Expect = 6.3 Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 13/88 (14%) Frame = +1 Query: 139 SPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPP-TPRKTINSGDKTAL 315 S ++ + R R H++ P + PS P P ++PP TPR +SG+ L Sbjct: 369 SLSSTLLRHRLTHME--PQDFSFPGYPLPALIPSPPPPPLGTSPPLTPRSPSHSGEPFGL 426 Query: 316 INNRPMP------------RKDQVHRCP 363 P P D+ H+CP Sbjct: 427 PGLEPEPGGPQAGEPPPPLAGDKPHKCP 454
>SYN_ANASP (P58692) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 463 Score = 28.5 bits (62), Expect = 8.2 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -2 Query: 119 SSDFGA*CQRYLCCSFYSHQWFEDRLQAPFLW-HTPII 9 ++ FGA + CS HQ+F++R FLW HTPII Sbjct: 128 TNSFGAVFRVRNACSAAIHQFFQER---GFLWVHTPII 162
>GA2L1_MOUSE (Q8JZP9) GAS2-like protein 1 (Growth arrest-specific 2-like 1)| Length = 678 Score = 28.5 bits (62), Expect = 8.2 Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 23/121 (19%) Frame = +1 Query: 97 HQAPKSEDG--NPASASPTNKIARSRDRHLDTLPNSYQSSNTSYIT--------SQPSVP 246 H+ P+ G +P SPT R +P S + S+ +T P P Sbjct: 281 HRLPQQRTGTFSPQRGSPTPS-----PRPGSPVPGSERRSSRPEVTPISLRGTKEGPETP 335 Query: 247 QDPKASAPPTPRKTINSGDKTALINNR---PM----------PRKDQVHRCPSARLQAAP 387 P+ PP PR SGD + ++ PM R+++ P++ L A+P Sbjct: 336 LRPRDQLPPLPRSRRYSGDSDSSASSAQSGPMGARSDDSATGSRRERPSHRPTSCLPASP 395 Query: 388 R 390 R Sbjct: 396 R 396
>GRLF1_RAT (P81128) Glucocorticoid receptor DNA-binding factor 1 (GAP-associated| protein p190) Length = 1513 Score = 28.5 bits (62), Expect = 8.2 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -1 Query: 435 QMVPLKLVSRPVREVPGSSLQPSR-WTPMNLILPWH 331 Q P +RP+ E PG++L P + W P++ P H Sbjct: 1430 QQCPFFFYNRPISEPPGAALAPLQPWHPLSPSSPLH 1465
>RPB1_ASHGO (Q75A34) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RNA polymerase II subunit 1) Length = 1745 Score = 28.5 bits (62), Expect = 8.2 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 2/84 (2%) Frame = +1 Query: 103 APKSEDGNPASAS--PTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPT 276 +P S +P S S PT+ SY ++ SY + PS + +P + Sbjct: 1658 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1717 Query: 277 PRKTINSGDKTALINNRPMPRKDQ 348 P+ + S + NN +KD+ Sbjct: 1718 PQYSPRSPSYSPSFNNNDKEQKDE 1741
>GRIN1_MOUSE (Q3UNH4) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)| Length = 932 Score = 28.5 bits (62), Expect = 8.2 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 4/83 (4%) Frame = +1 Query: 109 KSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSY----ITSQPSVPQDPKASAPPT 276 + DG P S++ + RS + +LP S++TS + P A+ PP Sbjct: 647 RQSDGTPYSSAQPQRDTRS----IGSLPEREPSASTSQKDLAAAAAQKSPSAEAAAPPPG 702 Query: 277 PRKTINSGDKTALINNRPMPRKD 345 PR N + P PR+D Sbjct: 703 PRTRDNFTKAPSWDAGAPPPRED 725
>TLE2_BRARE (O13166) Groucho 2 protein| Length = 761 Score = 28.5 bits (62), Expect = 8.2 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 8/70 (11%) Frame = +1 Query: 97 HQAPKSEDGNPASASPTNKIARSRDRHLDT--LPNSYQSSNTSYITSQPSVPQDPKASAP 270 ++ P + G+PA + P N I + R DT P S SS ++ + + K+S P Sbjct: 260 NEDPATPRGSPAHSPPENGIDKPRPAKKDTPRRPASVASSGSTPSSKTKPPEHNDKSSTP 319 Query: 271 ------PTPR 282 PTPR Sbjct: 320 GLKSKAPTPR 329
>SKI_MOUSE (Q60698) Ski oncogene (C-ski)| Length = 725 Score = 28.5 bits (62), Expect = 8.2 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +1 Query: 187 LPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDKTALINNRPMP 336 LP + S SY + + +V + A APPT +K +NS T +++ P P Sbjct: 394 LPALIRDSFYSYKSFETAVAPNV-ALAPPTQQKVVNSPPCTTVVSRAPEP 442
>YMD5_CAEEL (P34459) Hypothetical protein F54H12.5| Length = 880 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = +1 Query: 169 DRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDKT 309 +R+LD + ++ S N S ++ + + ++P TP TI+S D T Sbjct: 328 NRYLDFIKHAPTSPNNSKDPAKRFIGFNSSGASPTTPETTISSSDST 374 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,870,533 Number of Sequences: 219361 Number of extensions: 1357658 Number of successful extensions: 5754 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 5202 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5737 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
