Clone Name | rbastl29h07 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK042325.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630082H19 product:ubiquitin conjugating enzyme 7 interacting protein 3, full insert sequence Length = 1536 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 caggtccagggacaggcacct 179 ||||||||||||||||||||| Sbjct: 217 caggtccagggacaggcacct 237
>emb|AL831735.10| Mouse DNA sequence from clone RP23-452D3 on chromosome 2, complete sequence Length = 193718 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 caggtccagggacaggcacct 179 ||||||||||||||||||||| Sbjct: 190055 caggtccagggacaggcacct 190035
>ref|NM_184576.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 270 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 ctgctcggctgcaggctgct 384 |||||||||||||||||||| Sbjct: 100 ctgctcggctgcaggctgct 119
>gb|AC022419.7| Homo sapiens chromosome 5 clone CTD-2026L11, complete sequence Length = 104351 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 384 tcccaggcacctccctcactggcc 407 |||||||| ||||||||||||||| Sbjct: 23551 tcccaggctcctccctcactggcc 23574
>gb|AC090489.8| Genomic sequence for Mus musculus, clone RP23-104O10, complete sequence Length = 207424 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 ctgcaggctgctcccaggca 392 |||||||||||||||||||| Sbjct: 413 ctgcaggctgctcccaggca 432
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 ctgctcggctgcaggctgct 384 |||||||||||||||||||| Sbjct: 990635 ctgctcggctgcaggctgct 990616
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ccaccgacaccgcgaaaaac 287 |||||||||||||||||||| Sbjct: 19440316 ccaccgacaccgcgaaaaac 19440297
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 ctgctcggctgcaggctgct 384 |||||||||||||||||||| Sbjct: 16297083 ctgctcggctgcaggctgct 16297102
>gb|AC026797.3|AC026797 Homo sapiens chromosome 5 clone CTD-2299N12, complete sequence Length = 172043 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 tcccaggcacctccctcactggcc 407 |||||||| ||||||||||||||| Sbjct: 131154 tcccaggctcctccctcactggcc 131131
>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0409B11 Length = 168354 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ccaccgacaccgcgaaaaac 287 |||||||||||||||||||| Sbjct: 129854 ccaccgacaccgcgaaaaac 129835
>dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0646B04 Length = 178896 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 ctgctcggctgcaggctgct 384 |||||||||||||||||||| Sbjct: 154762 ctgctcggctgcaggctgct 154743
>dbj|AP006237.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008D07 Length = 156874 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 ctgctcggctgcaggctgct 384 |||||||||||||||||||| Sbjct: 59160 ctgctcggctgcaggctgct 59179
>dbj|AP005860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1134_E08 Length = 153002 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 ctgctcggctgcaggctgct 384 |||||||||||||||||||| Sbjct: 28328 ctgctcggctgcaggctgct 28309
>gb|AC135859.4| Mus musculus BAC clone RP24-151D9 from 10, complete sequence Length = 182809 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ctgcaggctgctcccaggca 392 |||||||||||||||||||| Sbjct: 56788 ctgcaggctgctcccaggca 56769 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,773,474 Number of Sequences: 3902068 Number of extensions: 3773474 Number of successful extensions: 81982 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81916 Number of HSP's gapped (non-prelim): 66 length of query: 453 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 431 effective length of database: 17,147,199,772 effective search space: 7390443101732 effective search space used: 7390443101732 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)