>AKR1_GIBZE (Q4I8B6) Palmitoyltransferase AKR1 (EC 2.3.1.-) (Ankyrin|
           repeat-containing protein AKR1)
          Length = 702

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = +1

Query: 241 TVHNRIMGYLSGSK*SWRNET--PLDVHHQTLKAEGPDGATRHWPSGGPTRNL*NDLNDK 414
           T +  + G   G+  +    T  PLD +H +L A GP  A  H   GG  ++L   L   
Sbjct: 553 TTYENMFGIRDGTNITALTSTGAPLDPNHPSLSATGPAAAHSHKHKGGMLKSLSRTLGVD 612

Query: 415 CLMNSRSWRGGI 450
             + + + RG +
Sbjct: 613 PFIETITGRGAV 624

>NCCH_ALCXX (Q44583) RNA polymerase sigma factor nccH|
          Length = 186

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 13/46 (28%), Positives = 26/46 (56%)
 Frame = +2

Query: 233 IIQRSTIGSWDTYQALNRAGEMKLPWMFIIKLSRLKDLMELRGIGH 370
           I+Q + I +W      + + ++  PW+F I L++++DL   R + H
Sbjct: 50  IVQDTFIAAWHALDDFD-SDKLFRPWLFRIGLNKMRDLRRFRQVRH 94

>YKE7_YEAST (P36090) Hypothetical 58.9 kDa protein in ELM1-PRI2 intergenic|
           region
          Length = 516

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
 Frame = +1

Query: 61  TSKAQ*FDLGYSYIDSKTYKLIIQMNMDVKLNKDSVSTGV--DVITSMQKALNGVFWYIY 234
           T+K   +D G +Y    ++ +I   N   +      S GV  DV  +   +    +  IY
Sbjct: 92  TAKTTTYDYGIAYFKQNSFDIIENDNRIDRSKVQMFSLGVIIDVQNASSDSKKHFYKEIY 151

Query: 235 YSTVHNRIMGYLSGSK*SWRNETPLD 312
           ++   NR   YL      W  +  LD
Sbjct: 152 HAYAANRYSSYLESLLGQWIRQRDLD 177

>ISP4_SCHPO (P40900) Sexual differentiation process protein isp4|
          Length = 785

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 22/92 (23%), Positives = 45/92 (48%)
 Frame = +1

Query: 31  YKS*RILTISTSKAQ*FDLGYSYIDSKTYKLIIQMNMDVKLNKDSVSTGVDVITSMQKAL 210
           Y++   + +ST+ A  F L ++ I S  + +I+    ++  ++       D+   + KA 
Sbjct: 400 YQNYSPIFMSTTYALAFGLSFASITSVIFHVILYHGKEI-YDRLRDPPAPDIHEKLMKAY 458

Query: 211 NGVFWYIYYSTVHNRIMGYLSGSK*SWRNETP 306
           + V +Y +Y +V     G + G+   W+ ETP
Sbjct: 459 DEVPFY-WYLSVFLAFFGMMMGTIYGWKTETP 489

>MTMR5_HUMAN (O95248) SET-binding factor 1 (Sbf1) (Myotubularin-related protein 5)|
          Length = 1866

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = -1

Query: 449  IPPRQLLEFIKHLSLRS--FHKFLVGPPDGQCLVAPSGPSALRV 324
            +P R + E++  LS R+  FH ++  P D + L   S  S L+V
Sbjct: 1548 VPCRSVWEYVDRLSKRTPVFHNYMYAPEDAEVLRPYSNVSNLKV 1591


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,822,605
Number of Sequences: 219361
Number of extensions: 1345416
Number of successful extensions: 2664
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2664
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)