Clone Name | rbastl29h04 |
---|---|
Clone Library Name | barley_pub |
>gb|AC140274.2| Mus musculus BAC clone RP23-455O6 from chromosome 7, complete sequence Length = 186562 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 ttcagtctccaaatcaccaggt 42 |||||||||||||||||||||| Sbjct: 16689 ttcagtctccaaatcaccaggt 16710
>gb|AC131784.4| Mus musculus BAC clone RP24-391G14 from chromosome 7, complete sequence Length = 175150 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 ttcagtctccaaatcaccaggt 42 |||||||||||||||||||||| Sbjct: 151799 ttcagtctccaaatcaccaggt 151820
>emb|AL121998.7|HSJ1103B4 Human DNA sequence from clone RP5-1103B4 on chromosome 1 Contains the C8A gene for complement component 8 alpha polypeptide, the C8B gene for complement component 8 beta polypeptide and a novel gene, complete sequence Length = 131188 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 439 tctcccagcatgatgacaggaa 460 |||||||||||||||||||||| Sbjct: 101566 tctcccagcatgatgacaggaa 101545
>gb|AC100763.2| Homo sapiens chromosome 11, clone RP11-748C4, complete sequence Length = 172963 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 tagcaagtataccattatata 388 ||||||||||||||||||||| Sbjct: 912 tagcaagtataccattatata 932
>gb|AC011092.4| Homo sapiens, clone RP11-1H15, complete sequence Length = 192318 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 tagcaagtataccattatata 388 ||||||||||||||||||||| Sbjct: 23454 tagcaagtataccattatata 23434
>gb|AC010614.8| Homo sapiens chromosome 19 clone CTD-2518G19, complete sequence Length = 158595 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 cttctacactgacaactgcaa 366 ||||||||||||||||||||| Sbjct: 103693 cttctacactgacaactgcaa 103713
>gb|AY769280.1| Bombyx mori ribosomal protein L11 (RpL11) mRNA, complete cds Length = 675 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ccttggcggcacgagtcagc 336 |||||||||||||||||||| Sbjct: 199 ccttggcggcacgagtcagc 180
>gb|AC132319.3| Mus musculus BAC clone RP24-258I12 from chromosome 19, complete sequence Length = 193053 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 ttctcactcccctgtaactg 432 |||||||||||||||||||| Sbjct: 91944 ttctcactcccctgtaactg 91963
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 aaaacactcaattatcacaaaaga 127 ||||||||||||||||| |||||| Sbjct: 3324814 aaaacactcaattatcagaaaaga 3324791
>gb|AC017006.4| Homo sapiens BAC clone RP11-110G2 from 2, complete sequence Length = 191953 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 ttgcatgacaagcatcaatgtcca 283 ||||||||| |||||||||||||| Sbjct: 51642 ttgcatgaccagcatcaatgtcca 51619
>emb|BX322637.7| Zebrafish DNA sequence from clone DKEY-22A1 in linkage group 9, complete sequence Length = 178563 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 aaaagagttcagattacagattaa 145 |||| ||||||||||||||||||| Sbjct: 2688 aaaacagttcagattacagattaa 2711
>emb|AL928920.5| Zebrafish DNA sequence from clone DKEY-14A7 in linkage group 20, complete sequence Length = 195351 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 taccattatataatgcgaca 396 |||||||||||||||||||| Sbjct: 115185 taccattatataatgcgaca 115204
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05, complete sequence Length = 167317 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 aaaacactcaattatcacaaaaga 127 ||||||||||||||||| |||||| Sbjct: 118638 aaaacactcaattatcagaaaaga 118615 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,808,533 Number of Sequences: 3902068 Number of extensions: 3808533 Number of successful extensions: 65618 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65565 Number of HSP's gapped (non-prelim): 53 length of query: 465 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 443 effective length of database: 17,147,199,772 effective search space: 7596209498996 effective search space used: 7596209498996 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)