>CH60_PORPU (P51349) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 528

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = -3

Query: 169 TQDAG*DVCTVCVDFNWAGSHVPVTRPRMIWINDGEQGTLAGRCDQI 29
           T+DAG  + TV +D       V VT+     I DG + T+  RC+QI
Sbjct: 302 TEDAGFSLDTVQLDMLGKARRVVVTKDSTTIIADGHEATVKSRCEQI 348

>SUFI_ECOLI (P26648) Protein sufI precursor|
          Length = 470

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
 Frame = +1

Query: 142 YIHPNPRLVSCLVTGLQDKNYPSLVTDARHQRSSPSSSFTGPPASSGA*SKMLRSGPGWL 321
           +  P+  LVS LV  L+      LVTD+   R  P+    G P  S   S  L   PG  
Sbjct: 308 FFEPSSILVSTLVLTLRPTGLLPLVTDSLPMRLLPTEIMAGSPIRSRDIS--LGDDPG-- 363

Query: 322 SSSGDLW-ASSLEQVPSVSAWKQLAARSSSGKTWSV 426
             +G LW  + ++       W++   R+   + + +
Sbjct: 364 -INGQLWDVNRIDVTAQQGTWERWTVRADEPQAFHI 398

>LPQH_MYCAV (P46733) Lipoprotein lpqH precursor (19 kDa lipoprotein antigen)|
          Length = 161

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +1

Query: 127 NRHIRYIHPNPRLVSCLVTGLQ--DKNYPSLVTDARHQRSSPSSSFTGPPASSG 282
           NR +R+    P +++ +V+G    +K+ PS         SS SSS T P ASSG
Sbjct: 2   NRQLRFAVAGPEILAAVVSGCSSGNKSAPS---------SSASSSSTSPSASSG 46

>FBX33_HUMAN (Q7Z6M2) F-box only protein 33|
          Length = 555

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = +1

Query: 349 SLEQVPSVSAWKQLAARSSSGKTWSVLMDPSAFDLLLVLK 468
           SL+ +P+   WK L+ +S+S + + +  D  + D+L +LK
Sbjct: 350 SLDNMPNDEHWKALSRKSTSFRVYIMAFDIKSEDMLKILK 389

>SUFI_SALTY (P0A1C5) Protein sufI precursor|
          Length = 470

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
 Frame = +1

Query: 142 YIHPNPRLVSCLVTGLQDKNYPSLVTDARHQRSSPSSSFTGPPASSGA*SKMLRSGPGWL 321
           +  P+  LVS LV  L+      LVTD    R  P+   +G P  S   S  L   PG  
Sbjct: 308 FFEPSSILVSTLVLTLRPTGLLPLVTDNLPMRLLPTEIMSGAPVRSRDIS--LGDDPG-- 363

Query: 322 SSSGDLW-ASSLEQVPSVSAWKQLAARSSSGKTWSV 426
             +G LW  + ++       W++   R+   +++ +
Sbjct: 364 -INGQLWDVNRIDITAQQGTWERWTVRADMPQSFHI 398

>SUFI_SALTI (P0A1C6) Protein sufI precursor|
          Length = 470

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
 Frame = +1

Query: 142 YIHPNPRLVSCLVTGLQDKNYPSLVTDARHQRSSPSSSFTGPPASSGA*SKMLRSGPGWL 321
           +  P+  LVS LV  L+      LVTD    R  P+   +G P  S   S  L   PG  
Sbjct: 308 FFEPSSILVSTLVLTLRPTGLLPLVTDNLPMRLLPTEIMSGAPVRSRDIS--LGDDPG-- 363

Query: 322 SSSGDLW-ASSLEQVPSVSAWKQLAARSSSGKTWSV 426
             +G LW  + ++       W++   R+   +++ +
Sbjct: 364 -INGQLWDVNRIDITAQQGTWERWTVRADMPQSFHI 398

>CRH1_YEAST (P53301) Probable glycosidase CRH1 precursor (EC 3.2.-.-) (Congo|
           red hypersensitive protein 1)
          Length = 507

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
 Frame = +1

Query: 166 VSCLVTGLQDKNYPSLVTDARHQRSS-PSSSFTGPPASSGA*SKMLRSGPGWLSSSGDLW 342
           VS  V+        S V+      SS  SSS T P +S+   SK L S     SSS    
Sbjct: 324 VSSTVSSSASSTVSSSVSSTVSSSSSVSSSSSTSPSSSTATSSKTLASSSVTTSSS---- 379

Query: 343 ASSLEQVPSVSAWKQLAARSSSGKTWSVLMDPS 441
            SS E+  S S+ K +A+ S+S    S    P+
Sbjct: 380 ISSFEKQSSSSSKKTVASSSTSESIISSTKTPA 412

>NFYA3_ARATH (Q93ZH2) Nuclear transcription factor Y subunit A-3 (AtNF-YA-3)|
           (Transcriptional activator HAP2C)
          Length = 340

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +3

Query: 45  PASVPCSPSLIQIIRGRVTGTWLPAQLKSTHTVHTS*PASCVVSRYRFTRQKL 203
           P +  C+P ++ +I GRV    LPA+L  T  V  +      + R R  R KL
Sbjct: 152 PQAPTCNPQMVSMIPGRVP---LPAELTETDPVFVNAKQYHAIMRRRQQRAKL 201

>OTC_RHOPA (Q6N0J0) Ornithine carbamoyltransferase (EC 2.1.3.3) (OTCase)|
          Length = 310

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = -2

Query: 344 AHRSPELDSQ--PGPDRSIFDQAPEEAGGPVKDDEGLLRWCLASV 216
           AHR  E+  +   GP   +FD+A       +   +G+L WCL +V
Sbjct: 269 AHRGEEVTDEVIDGPQSVVFDEAENR----LHAQKGILAWCLGAV 309

>CORO7_HUMAN (P57737) Coronin-7 (70 kDa WD repeat tumor rejection antigen|
           homolog)
          Length = 925

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = +1

Query: 151 PNPRLVSCLVTG---LQDKNYPSLVTDARHQRSSPSSSFTGPPASSGA*SKMLRSGPGWL 321
           P+P   SCLV     L D   P+ V +     +  S  F+ PP+S  + S     GP   
Sbjct: 391 PHPSFTSCLVPPAEPLPDTAQPA-VMETPVGDADASEGFSSPPSSLTSPSTPSSLGPSLS 449

Query: 322 SSSGDLWASSLEQVPSV 372
           S+SG   + SL  + S+
Sbjct: 450 STSGIGTSPSLRSLQSL 466


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,103,492
Number of Sequences: 219361
Number of extensions: 1522736
Number of successful extensions: 4233
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4218
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)