>TFB4_DEBHA (Q6BL86) RNA polymerase II transcription factor B subunit 4 (RNA|
           polymerase II transcription factor B p34 subunit) (RNA
           polymerase II transcription factor B 34 kDa subunit)
          Length = 387

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 118 YRGHSFINGNSA-IGLACRVCICMYSI 41
           YR   FI G S  +G  C VC+C+ SI
Sbjct: 310 YRASCFITGKSVNLGFVCSVCLCIMSI 336


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,018,095
Number of Sequences: 219361
Number of extensions: 187531
Number of successful extensions: 349
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 80,573,946
effective HSP length: 16
effective length of database: 77,064,170
effective search space used: 1849540080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)