>gb|AY112527.1| Zea mays CL27878_1 mRNA sequence
          Length = 806

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 139/174 (79%)
 Strand = Plus / Plus

                                                                       
Query: 295 gtcatatgggaactcactgtcgtcttcttttaccttaaacggctccggatgacggccaga 354
           |||| ||||||||||| |||| || |||   ||||| || |||||||| || || |  ||
Sbjct: 299 gtcaaatgggaactcattgtcatcctctaccaccttgaatggctccgggtggcgactgga 358

                                                                       
Query: 355 gcaataaatattccacatcttgaagtacgccctatcaaggttccgaacccatcgagcagt 414
           ||| ||||  |||||||||||| |||| || || |||||||| || ||||||||||| ||
Sbjct: 359 gcagtaaaggttccacatcttgtagtatgctctttcaaggttgcgcacccatcgagctgt 418

                                                                 
Query: 415 gtcaaataaaggacaggttaaacgaacttctttaagcttattggtcagtgcttg 468
            ||||| || || ||||| | ||||||||| || ||||| || ||||| |||||
Sbjct: 419 atcaaacaacgggcaggtcatacgaacttccttgagcttgttagtcagcgcttg 472

>gb|BT018403.1| Zea mays clone EL01N0324C05.d mRNA sequence
          Length = 1615

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                        
Query: 365  ttccacatcttgaagtacgccctatcaaggttccgaacccatcgagcagtgtcaaataaa 424
            |||||||||||| |||| ||||| |||| ||| || ||||||||||| || ||||| || 
Sbjct: 1206 ttccacatcttgtagtatgccctttcaaagttgcgcacccatcgagctgtatcaaacaac 1147

                                                        
Query: 425  ggacaggttaaacgaacttctttaagcttattggtcagtgcttg 468
            || ||||| | ||||||||| || ||||| || ||||| |||||
Sbjct: 1146 gggcaggtcatacgaacttccttgagcttgttagtcagcgcttg 1103

>ref|XM_465744.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2862

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 94/115 (81%)
 Strand = Plus / Minus

                                                                        
Query: 365  ttccacatcttgaagtacgccctatcaaggttccgaacccatcgagcagtgtcaaataaa 424
            |||||||||||| ||||||| |  |||||||| || ||||||| ||| || |||||||| 
Sbjct: 2786 ttccacatcttgtagtacgcacgttcaaggttgcgtacccatctagctgtatcaaataat 2727

                                                                   
Query: 425  ggacaggttaaacgaacttctttaagcttattggtcagtgcttggagttttgccg 479
            || || || | ||| ||||| || | |||||| ||||| ||||| ||||||||||
Sbjct: 2726 gggcaagtcatacggacttccttcaacttattagtcagagcttgaagttttgccg 2672

>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 258     ttttatctacacagccgggatttcat 283
               |||||||||||||| |||||||||||
Sbjct: 2683659 ttttatctacacagtcgggatttcat 2683634

>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 258     ttttatctacacagccgggatttcat 283
               |||||||||||||| |||||||||||
Sbjct: 2684519 ttttatctacacagtcgggatttcat 2684494

>emb|BX647691.1|HSM807837 Homo sapiens mRNA; cDNA DKFZp686E07118 (from clone DKFZp686E07118)
          Length = 3909

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 60   caacaatcaggaaccaacaaa 80
            |||||||||||||||||||||
Sbjct: 2387 caacaatcaggaaccaacaaa 2407

>dbj|AK126051.1| Homo sapiens cDNA FLJ44063 fis, clone TESTI4035637
          Length = 4291

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 60   caacaatcaggaaccaacaaa 80
            |||||||||||||||||||||
Sbjct: 2797 caacaatcaggaaccaacaaa 2817

>dbj|AK126036.1| Homo sapiens cDNA FLJ44048 fis, clone TESTI4030669
          Length = 3104

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 60   caacaatcaggaaccaacaaa 80
            |||||||||||||||||||||
Sbjct: 1608 caacaatcaggaaccaacaaa 1628

>gb|AC092782.2| Homo sapiens chromosome 1 clone RP11-411G13, complete sequence
          Length = 155355

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 357    aataaatattccacatcttga 377
              |||||||||||||||||||||
Sbjct: 118899 aataaatattccacatcttga 118879

>gb|AC092806.2| Homo sapiens chromosome 1 clone RP11-156F12, complete sequence
          Length = 153527

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 357   aataaatattccacatcttga 377
             |||||||||||||||||||||
Sbjct: 10289 aataaatattccacatcttga 10269

>ref|NM_207482.1| Homo sapiens FLJ44048 protein (FLJ44048), mRNA
          Length = 4291

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 60   caacaatcaggaaccaacaaa 80
            |||||||||||||||||||||
Sbjct: 2797 caacaatcaggaaccaacaaa 2817

>gb|AC008174.2| Homo sapiens BAC clone RP11-400O18 from 2, complete sequence
          Length = 103663

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 60    caacaatcaggaaccaacaaa 80
             |||||||||||||||||||||
Sbjct: 44787 caacaatcaggaaccaacaaa 44767

>emb|BX648733.1|HSM808884 Homo sapiens mRNA; cDNA DKFZp686G1928 (from clone DKFZp686G1928)
          Length = 5153

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 60   caacaatcaggaaccaacaaa 80
            |||||||||||||||||||||
Sbjct: 3564 caacaatcaggaaccaacaaa 3584

>gb|BT013712.1| Lycopersicon esculentum clone 132556F, mRNA sequence
          Length = 3216

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 348  ggccagagcaataaatattccacatctt 375
            ||||||||||||| | ||||||||||||
Sbjct: 3020 ggccagagcaatagagattccacatctt 2993

>emb|CR956632.4| Pig DNA sequence from clone CH242-197B5 on chromosome 7, complete
              sequence
          Length = 186089

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     gctcagtgtcaacattctga 31
              ||||||||||||||||||||
Sbjct: 101926 gctcagtgtcaacattctga 101907

>gb|AC113318.8| Mus musculus chromosome 3, clone RP23-442I7, complete sequence
          Length = 213409

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     caacaatcaggaaccaacaa 79
              ||||||||||||||||||||
Sbjct: 116364 caacaatcaggaaccaacaa 116345

>emb|AL590733.8| Human DNA sequence from clone RP11-193D23 on chromosome 6 Contains
            the 3' end of the FLJ14440 gene for thrombospondin,
            complete sequence
          Length = 135507

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  caaaggtctatatggtacag 205
            ||||||||||||||||||||
Sbjct: 7977 caaaggtctatatggtacag 7958

>gb|AC002472.8| Homo sapiens Chromosome 22q11.2 PAC Clone p_n5 In BCRL2-GGT Region,
             complete sequence
          Length = 147086

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 286   tcctcatctgtcatatggga 305
             ||||||||||||||||||||
Sbjct: 91351 tcctcatctgtcatatggga 91370

>gb|AC007664.12| Homo sapiens chromosome 22 clone b453h4 map 22q11, complete sequence
          Length = 162470

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 286   tcctcatctgtcatatggga 305
             ||||||||||||||||||||
Sbjct: 47447 tcctcatctgtcatatggga 47466

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 401      acccatcgagcagtgtcaaataaaggacaggt 432
                ||||||||||| || ||||| |||||||||||
Sbjct: 39874950 acccatcgagctgtatcaaacaaaggacaggt 39874981

>gb|AC154876.7| Mus musculus chromosome 3, clone RP23-190D19, complete sequence
          Length = 196840

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 424    aggacaggttaaacgaacttctttaagc 451
              |||||||||||||  |||||||||||||
Sbjct: 124223 aggacaggttaaaaaaacttctttaagc 124250

>gb|AC016945.22| Homo sapiens 3 BAC RP11-31L6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 96001

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   tctttcttgggtacataagt 172
             ||||||||||||||||||||
Sbjct: 60339 tctttcttgggtacataagt 60320

>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0004D12
          Length = 138136

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 401   acccatcgagcagtgtcaaataaaggacaggt 432
             ||||||||||| || ||||| |||||||||||
Sbjct: 55658 acccatcgagctgtatcaaacaaaggacaggt 55689

>emb|AL590792.1| Human DNA sequence from clone RP11-416F22 on chromosome 6, complete
            sequence
          Length = 51956

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  caaaggtctatatggtacag 205
            ||||||||||||||||||||
Sbjct: 6073 caaaggtctatatggtacag 6054


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,072,899
Number of Sequences: 3902068
Number of extensions: 4072899
Number of successful extensions: 66924
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66850
Number of HSP's gapped (non-prelim): 74
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)