>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein) (PRPL-2 protein)
          Length = 503

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 20/59 (33%), Positives = 27/59 (45%)
 Frame = +3

Query: 237 SPLISFL*SDPFLMRQRISPTHQISSLPSPRRAGAQIASRPSARRHPMPWPSPQSTRVP 413
           SPL S   S PF  R  + PT   +    P      + +RPS  R  +P P PQ+ + P
Sbjct: 238 SPLSS---SSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPP 293

>FOG1_HUMAN (Q8IX07) Zinc finger protein ZFPM1 (Zinc finger protein multitype|
           1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1)
          Length = 1004

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 333 AGAQIASRPSARRHPMPWPSPQSTRVPGDHGGRAGM 440
           AG  + +R  A R P P P+P ++  PG  G R G+
Sbjct: 884 AGPGVEARTPADRGPSPAPAPAASPQPGSRGPRDGL 919

>NFAC2_HUMAN (Q13469) Nuclear factor of activated T-cells, cytoplasmic 2 (T cell|
           transcription factor NFAT1) (NFAT pre-existing subunit)
           (NF-ATp)
          Length = 925

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
 Frame = +3

Query: 309 SSLPSPRR----AGAQIASRPSA--RRHPMPWPSPQSTRVPGDHGGRAGMP 443
           SS P  +R    A A +A  P A  +R   P P P S   P DHG  AG P
Sbjct: 245 SSSPGAKRRHSCAEALVALPPGASPQRSRSPSPQPSSHVAPQDHGSPAGYP 295

>PHC3_HUMAN (Q8NDX5) Polyhomeotic-like protein 3 (hPH3) (Homolog of|
           polyhomeotic 3) (Early development regulatory protein 3)
          Length = 983

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
 Frame = +3

Query: 279 RQRISPTHQ----ISSLPSPRRAGAQIASRPSARRHPMPWPSPQSTRV 410
           +Q +SP+HQ    + S P P  +  Q+++ P A+  P+P  S QS +V
Sbjct: 479 QQIVSPSHQQYSSLQSSPIPIASPPQMSTSPPAQIPPLPLQSMQSLQV 526

>GUN1_ACICE (P54583) Endoglucanase E1 precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase E1) (Cellulase E1)
           (Endocellulase E1)
          Length = 562

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 309 SSLPSPRRAGAQIASRPSARRHPMPWPSPQSTRVP 413
           SS+  P  A A  +S+PS    P P PSP ++R P
Sbjct: 393 SSIFDPVGASASPSSQPSPSVSPSPSPSPSASRTP 427

>P100_HHV6U (Q00701) Large structural phosphoprotein (PP100) (P100) (Major|
           antigenic structural protein)
          Length = 870

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +1

Query: 109 PLAFTSLNLSLPKQHFTSTNM 171
           P +FTS NL LP   FTSTN+
Sbjct: 389 PSSFTSTNLDLPLSSFTSTNL 409

>PRTP_MCMVS (P30674) Probable processing and transport protein (Infected cell|
           protein 18.5)
          Length = 798

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = +1

Query: 175 QMSITQVSTFLLLPCSQDGYDPH*FLSYNLIHFSCGSASLPPTKYRVYR---PPAVPVRK 345
           Q SIT+  T+  +  S  GYD H ++  NL+H    S  LP    ++YR    P      
Sbjct: 537 QRSITEAETYPDVAESL-GYDEHLYVINNLVHKRLPSELLPQLGQQIYRFINGPMFTHYL 595

Query: 346 LRHGLPH 366
            RH LP+
Sbjct: 596 DRHPLPY 602

>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)|
          Length = 815

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 19/59 (32%), Positives = 24/59 (40%)
 Frame = +3

Query: 267 PFLMRQRISPTHQISSLPSPRRAGAQIASRPSARRHPMPWPSPQSTRVPGDHGGRAGMP 443
           P +   ++ P  Q S L  P      + + P    H    P P     PG HGG AGMP
Sbjct: 559 PGMGMNQMLPPQQPSHLGPPH---PNMMNHPHHPHHHPGGPPPHMMGGPGMHGGPAGMP 614

>CN118_HUMAN (Q9NWQ4) Protein C14orf118|
          Length = 453

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +1

Query: 25  KHMSTVSVFLFLISESTIAQQISHICSHPLAFTSLNLSLPKQHFTSTNMPQMS 183
           + M T    + + S  +  Q   H+C  P+ FT +  S P QH    N P +S
Sbjct: 399 RQMYTGDHHVHVTSRGSGNQWPQHLCLAPVQFTWMQWSQPHQHHKPPNHPALS 451

>ESC8_YEAST (Q08119) Protein ESC8 (Establishes silent chromatin protein 8)|
          Length = 714

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -2

Query: 146 FGSDKFRLVNANG*LHICEICCAIVDSEMRNKK 48
           F + +F +  AN  L  CE+ C+++  ++ N+K
Sbjct: 340 FHASRFAMCGANNILDSCEVLCSLMSQKLENRK 372

>ATG4_CRYNE (Q5K9L9) Cysteine protease ATG4 (EC 3.4.22.-) (Autophagy-related|
           protein 4)
          Length = 1193

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 300 HQISSLPSPRRAGAQIASRPSARRHPMPWPSPQSTR 407
           + I S  SPR +  Q  SR +++   M WP+P+S R
Sbjct: 191 NSIQSRRSPRTSFGQAHSRRASQDSQMSWPAPRSIR 226

>ARR2_ARATH (Q9ZWJ9) Two-component response regulator ARR2 (Receiver-like|
           protein 5)
          Length = 664

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 9/67 (13%)
 Frame = -1

Query: 462 ISASVDVAYRHVLRG--------LLEPLSIEAMARAWDACVRKAVTQF-AHRHGGGTVNS 310
           I  S D +   VL+G        L++P+ IEA+   W   VRK   ++    H GG++  
Sbjct: 104 IMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIED 163

Query: 309 IFGGWER 289
             G  +R
Sbjct: 164 TGGDRDR 170

>IF2_RALSO (Q8XZV6) Translation initiation factor IF-2|
          Length = 964

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +3

Query: 303 QISSLPSPRRAGAQIASRPSARRHPMPWPSPQSTRVPGDHGGRAGMP 443
           Q  +L  P +A  +    P+A++   P  +P +T      GGR G P
Sbjct: 280 QSGTLHKPVKAAGEARPAPAAKKAAAPAAAPAATPAGDKKGGRGGKP 326

>INVS_MOUSE (O89019) Inversin (Inversion of embryo turning protein)|
           (Nephrocystin-2)
          Length = 1062

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = +3

Query: 318 PSPRRAGAQIASRPSAR---RHPMPWPSPQSTRVPGDHGGRA 434
           PSP+  G++  + PS +    H +  P P+ +R+PG   GRA
Sbjct: 633 PSPQNEGSKQDATPSKQPPASHTVQSPDPEHSRLPGRCPGRA 674

>CBIO2_STRAW (Q82B58) Putative cobalt import ATP-binding protein cbiO 2|
          Length = 561

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = +3

Query: 327 RRAGAQIASRPSARRHPMPWPSPQSTRVPGDHGGRAGMPRLLRPR 461
           RRAGA +  R +A   P P  +  +T  P     R   PRLLR R
Sbjct: 261 RRAGA-LRERLAATETPTPTATATATAAPAPSPSRPRRPRLLRKR 304

>PALI_MAGGR (Q51MB1) pH-response regulator protein palI/RIM9|
          Length = 736

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
 Frame = +3

Query: 267 PFLMRQRISPTHQISSLP--SPRRAGAQIASRPS------ARRHPMPWPSPQSTRVPGDH 422
           P +M Q ++ +    S+   SP   GA   SR S      A R   P PS + T VPG  
Sbjct: 566 PSMMPQPLNASRTDLSISRNSPGPGGAPARSRTSEYYEDVAPRFATPDPSLRGTPVPGQA 625

Query: 423 GGRAGMP 443
           GGR   P
Sbjct: 626 GGRIPPP 632

>R3HD1_HUMAN (Q15032) R3H domain-containing protein 1|
          Length = 1099

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
 Frame = +1

Query: 220 SQDGYDPH*FLSYNLIHFSCGSAS------LPPTKYRVYRPPAVPVRKLRHG--LPHAGI 375
           S DG DPH  +  + +       S       PP       PP  P   L  G  +P AG 
Sbjct: 558 SADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGY 617

Query: 376 PCPGHR-----LNRQGF-QETTEDVPVCH 444
           P  GH      L +QG+ Q+ +  +P C+
Sbjct: 618 PASGHPVSQPVLQQQGYIQQPSPQMPACY 646

>NFI1_YEAST (Q12216) Protein NFI1|
          Length = 726

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 25  KHMSTVSVFLFLISESTIAQQISHICSHPLAFTSLNLS 138
           KH+       FL S+S +      IC HP+ F  L +S
Sbjct: 355 KHIQCFDALWFLHSQSQVPTWQCPICQHPIKFDQLKIS 392

>NH197_CAEEL (O17931) Nuclear hormone receptor family member nhr-197|
          Length = 340

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 137 RFQNNTLHLQICPRCQ*RKSLHFCYCPVAKMVMIPTN 247
           R QN T+H +I P+C   ++  F  C +  M + P N
Sbjct: 41  RIQNCTIHFKIFPKC---RACRFQKCLIVGMTLAPLN 74

>ADA15_MOUSE (O88839) ADAM 15 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 15) (Metalloproteinase-like,
           disintegrin-like, and cysteine-rich protein 15) (MDC-15)
           (Metalloprotease RGD disintegrin protein) (Metargidin)
           (AD56)
          Length = 864

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +3

Query: 294 PTHQISSLPSPRRAGAQIASRPSARRHPMPWPSPQSTRVPGDHGG 428
           PT  + + P  RR  +Q  ++P   R P+P  +PQ    PGD  G
Sbjct: 795 PTRPLPADPVVRRPKSQGPTKPPPPRKPLP-ANPQGQHPPGDLPG 838

>GON4L_MOUSE (Q9DB00) GON-4-like protein (GON-4 homolog)|
          Length = 2260

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 321  SPRRAGAQIASRPSARRHPMPWPSPQSTR 407
            +P R  ++    P    HP P PSP STR
Sbjct: 2051 APHREASETERLPETVEHPAPLPSPVSTR 2079

>EP300_HUMAN (Q09472) E1A-associated protein p300 (EC 2.3.1.48)|
          Length = 2414

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
 Frame = +3

Query: 267  PFLMRQRI--SPTHQISS---LPSPRRAGAQIASRPSARRHPMPWPSPQSTRVPGDHGG 428
            P L  Q+I  S ++Q+ S   +PSPR       S PS R  P P P   S +    H G
Sbjct: 2292 PHLQGQQIPNSLSNQVRSPQPVPSPRPQSQPPHSSPSPRMQPQPSPHHVSPQTSSPHPG 2350

>PHEG_SYNPY (Q02181) Phycoerythrin class 2 subunit gamma, linker polypeptide|
           (Phycoerythrin class II gamma chain, linker polypeptide)
           (Phycobilisome 32.1 kDa rod linker polypeptide) (L-R
           32.1)
          Length = 293

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +1

Query: 25  KHMSTVSVFLFLISESTIAQQISHICSHPLAFTSLNLSLPKQHFTSTNMPQMS 183
           +   TV+       EST  Q  S++     + T + + LP+Q +T  N+P MS
Sbjct: 234 RQSKTVNALASASRESTKPQPFSYV-----SVTQIPVKLPQQQYTGHNVPAMS 281

>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated|
           protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor
           SF3b 49 kDa subunit)
          Length = 424

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +1

Query: 289 SLPPTKYRVYRPPAVPVRKLRHGLPHAGIPCPGH 390
           +LPP       PP +P     HG P AG P  GH
Sbjct: 252 ALPPGIPPAMPPPPMPPGAAGHGPPSAGTPGAGH 285

>OR2T5_HUMAN (Q6IEZ7) Olfactory receptor 2T5 (Olfactory receptor OR1-62)|
          Length = 315

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
 Frame = +1

Query: 4   LGKFSIFKHMSTVSVFLFLI-----SESTIAQQISHICSH---PLAFTSLNLSLPKQHFT 159
           +G F   KH + +SV +F++     S + +   + H  +H   P+ F    LSL    + 
Sbjct: 19  MGLFRRSKHPALLSVVIFVVFLKALSGNAVLILLIHCDAHLHSPMYFFISQLSLMDMAYI 78

Query: 160 STNMPQMSITQV 195
           S  +P+M + QV
Sbjct: 79  SVTVPKMLLDQV 90

>O2T29_HUMAN (Q8NH02) Olfactory receptor 2T29|
          Length = 315

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
 Frame = +1

Query: 4   LGKFSIFKHMSTVSVFLFLI-----SESTIAQQISHICSH---PLAFTSLNLSLPKQHFT 159
           +G F   KH + +SV +F++     S + +   + H  +H   P+ F    LSL    + 
Sbjct: 19  MGLFRQSKHPALLSVVIFVVFLKALSGNAVLILLIHCDAHLHSPMYFFISQLSLMDMAYI 78

Query: 160 STNMPQMSITQV 195
           S  +P+M + QV
Sbjct: 79  SVTVPKMLLDQV 90


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,642,637
Number of Sequences: 219361
Number of extensions: 1626562
Number of successful extensions: 5343
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5310
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)