ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl29g02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 220 3e-54
2dbj|AK105113.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
3dbj|AK060641.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 220 3e-54
5emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa... 220 3e-54
6emb|BX664710.2|CNS09SC0 Oryza sativa chromosome 12, . PAC P0243A... 220 3e-54
7gb|AY110960.1| Zea mays CL19555_1 mRNA sequence 153 6e-34
8gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome... 70 7e-09
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 70 7e-09
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
11ref|XM_469502.1| Oryza sativa (japonica cultivar-group), mRNA 66 1e-07
12dbj|AK069094.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
13gb|AC087903.26| Mus musculus strain C57BL/6J clone rp23-4p7 map ... 46 0.100
14gb|AC108750.3| Homo sapiens 3 BAC RP11-249L12 (Roswell Park Canc... 46 0.100
15gb|AC158989.1| Mus musculus BAC clone RP23-399H20 from chromosom... 46 0.100
16gb|AC150033.2| Mus musculus BAC clone RP23-449N19 from 3, comple... 46 0.100
17ref|XM_629078.1| Dictyostelium discoideum hypothetical protein (... 44 0.39
18gb|AC131185.4| Mus musculus BAC clone RP23-402H1 from chromosome... 44 0.39
19gb|AC149086.4| Mus musculus BAC clone RP24-245L1 from 19, comple... 44 0.39
20gb|AF106591.3| Caenorhabditis elegans cosmid T01A4, complete seq... 42 1.6
21gb|AC101902.9| Mus musculus chromosome 1, clone RP24-147M23, com... 42 1.6
22ref|XM_721142.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 42 1.6
23gb|AC155947.8| Mus musculus 6 BAC RP24-417N21 (Roswell Park Canc... 42 1.6
24gb|AC153374.5| Mus musculus 6 BAC RP23-281H4 (Roswell Park Cance... 42 1.6
25gb|AC006414.6|AC006414 Drosophila melanogaster, chromosome 3R, r... 42 1.6
26gb|AE003710.2| Drosophila melanogaster chromosome 3R, section 48... 42 1.6
27gb|AC132258.3| Mus musculus BAC clone RP24-361F13 from 1, comple... 42 1.6
28ref|XM_518652.1| PREDICTED: Pan troglodytes activating signal co... 40 6.2
29gb|AC161598.4| Mus musculus BAC clone RP23-360G8 from chromosome... 40 6.2
30gb|BC039857.1| Homo sapiens activating signal cointegrator 1 com... 40 6.2
31gb|AC134573.5| Mus musculus BAC clone RP23-460N10 from chromosom... 40 6.2
32ref|NM_006828.2| Homo sapiens activating signal cointegrator 1 c... 40 6.2
33gb|AC142504.2| Mus musculus BAC clone RP24-132F22 from chromosom... 40 6.2
34gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 6.2
35gb|AC129221.3| Mus musculus BAC clone RP24-480M20 from chromosom... 40 6.2
36gb|AC110262.12| Mus musculus chromosome 17, clone RP23-291L10, c... 40 6.2
37gb|AC127576.3| Mus musculus BAC clone RP24-242F12 from chromosom... 40 6.2
38gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 6.2
39gb|AC164645.4| Mus musculus BAC clone RP24-478G6 from chromosome... 40 6.2
40gb|BC014358.1| Homo sapiens activating signal cointegrator 1 com... 40 6.2
41emb|Z86062.1|HS121G13 Human DNA sequence from clone RP1-121G13 o... 40 6.2
42emb|AL354763.17| Human DNA sequence from clone RP11-357L1 on chr... 40 6.2
43emb|AL161899.21| Human DNA sequence from clone RP11-418I10 on ch... 40 6.2
44emb|AL136126.34| Human DNA sequence from clone RP1-89D4 on chrom... 40 6.2
45emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete g... 40 6.2
46emb|AL834463.1|HSM805565 Homo sapiens mRNA; cDNA DKFZp762E1710 (... 40 6.2
47gb|AY013288.1| Homo sapiens ASC-1 complex subunit P200 mRNA, par... 40 6.2
48gb|AC108149.4| Homo sapiens BAC clone RP11-473D12 from 4, comple... 40 6.2
49gb|AC159741.2| Mus musculus BAC clone RP23-178B21 from chromosom... 40 6.2
50gb|AC019086.7| Homo sapiens BAC clone RP11-360H4 from 2, complet... 40 6.2
51gb|AC133647.3| Mus musculus BAC clone RP23-287D22 from chromosom... 40 6.2
52dbj|AK111649.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
53emb|AJ338745.1|HSA338745 Homo sapiens genomic sequence surroundi... 40 6.2
54emb|AJ223948.1|HSA223948 Homo sapiens mRNA for putative RNA heli... 40 6.2
55emb|CR786571.6| Zebrafish DNA sequence from clone DKEY-234L24 in... 40 6.2
56emb|AM235388.1| Lupinus albus mRNA for auxin efflux carrier (pin... 40 6.2
57gb|AC149056.6| Mus musculus BAC clone RP23-344G11 from chromosom... 40 6.2
58emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310... 40 6.2
59emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260... 40 6.2
60gb|AC005138.1|AC005138 Homo sapiens chromosome 17, clone hRPK.26... 40 6.2
61gb|AC149869.2| Mus musculus BAC clone RP23-3E12 from 7, complete... 40 6.2
62emb|AL928835.6| Zebrafish DNA sequence from clone CH211-201P7 in... 40 6.2
63emb|CR854857.19| Zebrafish DNA sequence from clone CH211-129F7 i... 40 6.2 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  220 bits (111), Expect = 3e-54
 Identities = 167/185 (90%), Gaps = 3/185 (1%)
 Strand = Plus / Plus

                                                                            
Query: 241      caatgtcaagaggaatcaacatcttattttcacttgccagtgataaatggatggctaagt 300
                ||||| |||||| ||||||||||||   ||||||||||||||||||||||||||||||||
Sbjct: 27517657 caatgccaagagtaatcaacatctt---ttcacttgccagtgataaatggatggctaagt 27517713

                                                                            
Query: 301      gcctgtgatacggttatcctcttatctggatctaagacaaatattttttcaagaaggtct 360
                || ||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 27517714 gcttgtgatatggttatcctcttttctggatctaagacaaatattttttcaagaagatct 27517773

                                                                            
Query: 361      ttaaaattggagagcattttcgggtcctcgccaggaaaatttgaaaccaaagaaccaaaa 420
                ||||| ||||| |||||||| || ||||||||||| || ||||||| ||| ||||||| |
Sbjct: 27517774 ttaaagttggatagcatttttggatcctcgccagggaagtttgaaatcaaggaaccaata 27517833

                     
Query: 421      tcctt 425
                |||||
Sbjct: 27517834 tcctt 27517838



 Score =  141 bits (71), Expect = 2e-30
 Identities = 99/107 (92%), Gaps = 1/107 (0%)
 Strand = Plus / Plus

                                                                            
Query: 28       aatgtatacagggaatgtaatgccagccggccagttgtcttacaagcaacagaac-tatc 86
                |||||||||||| |||| ||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 27517432 aatgtatacaggtaatgaaatgccagctggccagttgtcttacaagcaacagaacatatc 27517491

                                                               
Query: 87       caaatggtaagtgcatgcagcaaggtccgtaagacagccatctcttc 133
                |||||| ||| |||||||| ||||||| |||||||||||||||||||
Sbjct: 27517492 caaatgataactgcatgcaccaaggtctgtaagacagccatctcttc 27517538



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 70/79 (88%), Gaps = 1/79 (1%)
 Strand = Plus / Plus

                                                                            
Query: 166      actcagatctcatagctcccag-acacaagatagaaatgtcgatgattagacaagaggaa 224
                |||| |||||||||||||| || |||||||| ||||||| | |||||||||||||||  |
Sbjct: 27517563 actctgatctcatagctccgaggacacaagacagaaatgccaatgattagacaagagcga 27517622

                                   
Query: 225      cccaaattgtagtttacaa 243
                |||||| ||||||||||||
Sbjct: 27517623 cccaaaatgtagtttacaa 27517641



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 321      cttatctggatctaagacaa 340
                ||||||||||||||||||||
Sbjct: 24230867 cttatctggatctaagacaa 24230848
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>dbj|AK105113.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-G04, full
            insert sequence
          Length = 3525

 Score =  220 bits (111), Expect = 3e-54
 Identities = 167/185 (90%), Gaps = 3/185 (1%)
 Strand = Plus / Minus

                                                                        
Query: 241  caatgtcaagaggaatcaacatcttattttcacttgccagtgataaatggatggctaagt 300
            ||||| |||||| ||||||||||||   ||||||||||||||||||||||||||||||||
Sbjct: 1126 caatgccaagagtaatcaacatctt---ttcacttgccagtgataaatggatggctaagt 1070

                                                                        
Query: 301  gcctgtgatacggttatcctcttatctggatctaagacaaatattttttcaagaaggtct 360
            || ||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 1069 gcttgtgatatggttatcctcttttctggatctaagacaaatattttttcaagaagatct 1010

                                                                        
Query: 361  ttaaaattggagagcattttcgggtcctcgccaggaaaatttgaaaccaaagaaccaaaa 420
            ||||| ||||| |||||||| || ||||||||||| || ||||||| ||| ||||||| |
Sbjct: 1009 ttaaagttggatagcatttttggatcctcgccagggaagtttgaaatcaaggaaccaata 950

                 
Query: 421  tcctt 425
            |||||
Sbjct: 949  tcctt 945



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 60/65 (92%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                        
Query: 70   caagcaacagaac-tatccaaatggtaagtgcatgcagcaaggtccgtaagacagccatc 128
            ||||||||||||| |||||||||| ||| |||||||| ||||||| ||||||||||||||
Sbjct: 1309 caagcaacagaacatatccaaatgataactgcatgcaccaaggtctgtaagacagccatc 1250

                 
Query: 129  tcttc 133
            |||||
Sbjct: 1249 tcttc 1245



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 70/79 (88%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                        
Query: 166  actcagatctcatagctcccag-acacaagatagaaatgtcgatgattagacaagaggaa 224
            |||| |||||||||||||| || |||||||| ||||||| | |||||||||||||||  |
Sbjct: 1220 actctgatctcatagctccgaggacacaagacagaaatgccaatgattagacaagagcga 1161

                               
Query: 225  cccaaattgtagtttacaa 243
            |||||| ||||||||||||
Sbjct: 1160 cccaaaatgtagtttacaa 1142
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>dbj|AK060641.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-E10, full
           insert sequence
          Length = 961

 Score =  220 bits (111), Expect = 3e-54
 Identities = 167/185 (90%), Gaps = 3/185 (1%)
 Strand = Plus / Minus

                                                                       
Query: 241 caatgtcaagaggaatcaacatcttattttcacttgccagtgataaatggatggctaagt 300
           ||||| |||||| ||||||||||||   ||||||||||||||||||||||||||||||||
Sbjct: 710 caatgccaagagtaatcaacatctt---ttcacttgccagtgataaatggatggctaagt 654

                                                                       
Query: 301 gcctgtgatacggttatcctcttatctggatctaagacaaatattttttcaagaaggtct 360
           || ||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 653 gcttgtgatatggttatcctcttttctggatctaagacaaatattttttcaagaagatct 594

                                                                       
Query: 361 ttaaaattggagagcattttcgggtcctcgccaggaaaatttgaaaccaaagaaccaaaa 420
           ||||| ||||| |||||||| || ||||||||||| || ||||||| ||| ||||||| |
Sbjct: 593 ttaaagttggatagcatttttggatcctcgccagggaagtttgaaatcaaggaaccaata 534

                
Query: 421 tcctt 425
           |||||
Sbjct: 533 tcctt 529



 Score =  141 bits (71), Expect = 2e-30
 Identities = 99/107 (92%), Gaps = 1/107 (0%)
 Strand = Plus / Minus

                                                                       
Query: 28  aatgtatacagggaatgtaatgccagccggccagttgtcttacaagcaacagaac-tatc 86
           |||||||||||| |||| ||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 935 aatgtatacaggtaatgaaatgccagctggccagttgtcttacaagcaacagaacatatc 876

                                                          
Query: 87  caaatggtaagtgcatgcagcaaggtccgtaagacagccatctcttc 133
           |||||| ||| |||||||| ||||||| |||||||||||||||||||
Sbjct: 875 caaatgataactgcatgcaccaaggtctgtaagacagccatctcttc 829



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 70/79 (88%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                       
Query: 166 actcagatctcatagctcccag-acacaagatagaaatgtcgatgattagacaagaggaa 224
           |||| |||||||||||||| || |||||||| ||||||| | |||||||||||||||  |
Sbjct: 804 actctgatctcatagctccgaggacacaagacagaaatgccaatgattagacaagagcga 745

                              
Query: 225 cccaaattgtagtttacaa 243
           |||||| ||||||||||||
Sbjct: 744 cccaaaatgtagtttacaa 726
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  220 bits (111), Expect = 3e-54
 Identities = 167/185 (90%), Gaps = 3/185 (1%)
 Strand = Plus / Plus

                                                                            
Query: 241      caatgtcaagaggaatcaacatcttattttcacttgccagtgataaatggatggctaagt 300
                ||||| |||||| ||||||||||||   ||||||||||||||||||||||||||||||||
Sbjct: 27443215 caatgccaagagtaatcaacatctt---ttcacttgccagtgataaatggatggctaagt 27443271

                                                                            
Query: 301      gcctgtgatacggttatcctcttatctggatctaagacaaatattttttcaagaaggtct 360
                || ||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 27443272 gcttgtgatatggttatcctcttttctggatctaagacaaatattttttcaagaagatct 27443331

                                                                            
Query: 361      ttaaaattggagagcattttcgggtcctcgccaggaaaatttgaaaccaaagaaccaaaa 420
                ||||| ||||| |||||||| || ||||||||||| || ||||||| ||| ||||||| |
Sbjct: 27443332 ttaaagttggatagcatttttggatcctcgccagggaagtttgaaatcaaggaaccaata 27443391

                     
Query: 421      tcctt 425
                |||||
Sbjct: 27443392 tcctt 27443396



 Score =  141 bits (71), Expect = 2e-30
 Identities = 99/107 (92%), Gaps = 1/107 (0%)
 Strand = Plus / Plus

                                                                            
Query: 28       aatgtatacagggaatgtaatgccagccggccagttgtcttacaagcaacagaac-tatc 86
                |||||||||||| |||| ||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 27442990 aatgtatacaggtaatgaaatgccagctggccagttgtcttacaagcaacagaacatatc 27443049

                                                               
Query: 87       caaatggtaagtgcatgcagcaaggtccgtaagacagccatctcttc 133
                |||||| ||| |||||||| ||||||| |||||||||||||||||||
Sbjct: 27443050 caaatgataactgcatgcaccaaggtctgtaagacagccatctcttc 27443096



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 70/79 (88%), Gaps = 1/79 (1%)
 Strand = Plus / Plus

                                                                            
Query: 166      actcagatctcatagctcccag-acacaagatagaaatgtcgatgattagacaagaggaa 224
                |||| |||||||||||||| || |||||||| ||||||| | |||||||||||||||  |
Sbjct: 27443121 actctgatctcatagctccgaggacacaagacagaaatgccaatgattagacaagagcga 27443180

                                   
Query: 225      cccaaattgtagtttacaa 243
                |||||| ||||||||||||
Sbjct: 27443181 cccaaaatgtagtttacaa 27443199



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 321      cttatctggatctaagacaa 340
                ||||||||||||||||||||
Sbjct: 24159073 cttatctggatctaagacaa 24159054
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>emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa0063N15 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 109222

 Score =  220 bits (111), Expect = 3e-54
 Identities = 167/185 (90%), Gaps = 3/185 (1%)
 Strand = Plus / Plus

                                                                         
Query: 241   caatgtcaagaggaatcaacatcttattttcacttgccagtgataaatggatggctaagt 300
             ||||| |||||| ||||||||||||   ||||||||||||||||||||||||||||||||
Sbjct: 93571 caatgccaagagtaatcaacatctt---ttcacttgccagtgataaatggatggctaagt 93627

                                                                         
Query: 301   gcctgtgatacggttatcctcttatctggatctaagacaaatattttttcaagaaggtct 360
             || ||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 93628 gcttgtgatatggttatcctcttttctggatctaagacaaatattttttcaagaagatct 93687

                                                                         
Query: 361   ttaaaattggagagcattttcgggtcctcgccaggaaaatttgaaaccaaagaaccaaaa 420
             ||||| ||||| |||||||| || ||||||||||| || ||||||| ||| ||||||| |
Sbjct: 93688 ttaaagttggatagcatttttggatcctcgccagggaagtttgaaatcaaggaaccaata 93747

                  
Query: 421   tcctt 425
             |||||
Sbjct: 93748 tcctt 93752



 Score =  141 bits (71), Expect = 2e-30
 Identities = 99/107 (92%), Gaps = 1/107 (0%)
 Strand = Plus / Plus

                                                                         
Query: 28    aatgtatacagggaatgtaatgccagccggccagttgtcttacaagcaacagaac-tatc 86
             |||||||||||| |||| ||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 93346 aatgtatacaggtaatgaaatgccagctggccagttgtcttacaagcaacagaacatatc 93405

                                                            
Query: 87    caaatggtaagtgcatgcagcaaggtccgtaagacagccatctcttc 133
             |||||| ||| |||||||| ||||||| |||||||||||||||||||
Sbjct: 93406 caaatgataactgcatgcaccaaggtctgtaagacagccatctcttc 93452



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 70/79 (88%), Gaps = 1/79 (1%)
 Strand = Plus / Plus

                                                                         
Query: 166   actcagatctcatagctcccag-acacaagatagaaatgtcgatgattagacaagaggaa 224
             |||| |||||||||||||| || |||||||| ||||||| | |||||||||||||||  |
Sbjct: 93477 actctgatctcatagctccgaggacacaagacagaaatgccaatgattagacaagagcga 93536

                                
Query: 225   cccaaattgtagtttacaa 243
             |||||| ||||||||||||
Sbjct: 93537 cccaaaatgtagtttacaa 93555
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>emb|BX664710.2|CNS09SC0 Oryza sativa chromosome 12, . PAC P0243A04 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 78611

 Score =  220 bits (111), Expect = 3e-54
 Identities = 167/185 (90%), Gaps = 3/185 (1%)
 Strand = Plus / Minus

                                                                         
Query: 241   caatgtcaagaggaatcaacatcttattttcacttgccagtgataaatggatggctaagt 300
             ||||| |||||| ||||||||||||   ||||||||||||||||||||||||||||||||
Sbjct: 49337 caatgccaagagtaatcaacatctt---ttcacttgccagtgataaatggatggctaagt 49281

                                                                         
Query: 301   gcctgtgatacggttatcctcttatctggatctaagacaaatattttttcaagaaggtct 360
             || ||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 49280 gcttgtgatatggttatcctcttttctggatctaagacaaatattttttcaagaagatct 49221

                                                                         
Query: 361   ttaaaattggagagcattttcgggtcctcgccaggaaaatttgaaaccaaagaaccaaaa 420
             ||||| ||||| |||||||| || ||||||||||| || ||||||| ||| ||||||| |
Sbjct: 49220 ttaaagttggatagcatttttggatcctcgccagggaagtttgaaatcaaggaaccaata 49161

                  
Query: 421   tcctt 425
             |||||
Sbjct: 49160 tcctt 49156



 Score =  141 bits (71), Expect = 2e-30
 Identities = 99/107 (92%), Gaps = 1/107 (0%)
 Strand = Plus / Minus

                                                                         
Query: 28    aatgtatacagggaatgtaatgccagccggccagttgtcttacaagcaacagaac-tatc 86
             |||||||||||| |||| ||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 49562 aatgtatacaggtaatgaaatgccagctggccagttgtcttacaagcaacagaacatatc 49503

                                                            
Query: 87    caaatggtaagtgcatgcagcaaggtccgtaagacagccatctcttc 133
             |||||| ||| |||||||| ||||||| |||||||||||||||||||
Sbjct: 49502 caaatgataactgcatgcaccaaggtctgtaagacagccatctcttc 49456



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 70/79 (88%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                         
Query: 166   actcagatctcatagctcccag-acacaagatagaaatgtcgatgattagacaagaggaa 224
             |||| |||||||||||||| || |||||||| ||||||| | |||||||||||||||  |
Sbjct: 49431 actctgatctcatagctccgaggacacaagacagaaatgccaatgattagacaagagcga 49372

                                
Query: 225   cccaaattgtagtttacaa 243
             |||||| ||||||||||||
Sbjct: 49371 cccaaaatgtagtttacaa 49353
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>gb|AY110960.1| Zea mays CL19555_1 mRNA sequence
          Length = 1005

 Score =  153 bits (77), Expect = 6e-34
 Identities = 136/156 (87%), Gaps = 1/156 (0%)
 Strand = Plus / Plus

                                                                       
Query: 241 caatgtcaagaggaatcaacatcttattttcacttgccagtgataaatggatggctaagt 300
           |||| ||||||||||||| |||||||| | ||||||||||||||||||||||||||||||
Sbjct: 327 caatatcaagaggaatcagcatcttatgt-cacttgccagtgataaatggatggctaagt 385

                                                                       
Query: 301 gcctgtgatacggttatcctcttatctggatctaagacaaatattttttcaagaaggtct 360
           || || ||||||||||||||||| ||||||||||| | ||| ||||| |||||||| |||
Sbjct: 386 gcttgggatacggttatcctcttttctggatctaatataaacattttatcaagaagatct 445

                                               
Query: 361 ttaaaattggagagcattttcgggtcctcgccagga 396
           |||||| |||| ||||     || ||||||||||||
Sbjct: 446 ttaaaactggatagcannnnnggatcctcgccagga 481



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 65/71 (91%), Gaps = 1/71 (1%)
 Strand = Plus / Plus

                                                                       
Query: 173 tctcatagctcccag-acacaagatagaaatgtcgatgattagacaagaggaacccaaat 231
           ||||| ||||||||| |||||||| ||||| ||||||||||||||||||| |||||||||
Sbjct: 240 tctcagagctcccaggacacaagacagaaacgtcgatgattagacaagagaaacccaaat 299

                      
Query: 232 tgtagtttaca 242
           |||| ||||||
Sbjct: 300 tgtattttaca 310
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>gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0018H01
             map R1538, complete sequence
          Length = 142712

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                         
Query: 268   tttcacttgccagtgataaatggatggctaagtgcctgtgatacggttatcctcttatct 327
             ||||||||||||||||| ||||||||||| ||||| | ||  || || |||||||| | |
Sbjct: 69474 tttcacttgccagtgatgaatggatggctgagtgcttctggcacagtaatcctcttcttt 69415

                                    
Query: 328   ggatctaagacaaatattttttc 350
             |||||||  ||||||||||||||
Sbjct: 69414 ggatctagcacaaatattttttc 69392
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                            
Query: 268      tttcacttgccagtgataaatggatggctaagtgcctgtgatacggttatcctcttatct 327
                ||||||||||||||||| ||||||||||| ||||| | ||  || || |||||||| | |
Sbjct: 28343568 tttcacttgccagtgatgaatggatggctgagtgcttctggcacagtaatcctcttcttt 28343627

                                       
Query: 328      ggatctaagacaaatattttttc 350
                |||||||  ||||||||||||||
Sbjct: 28343628 ggatctagcacaaatattttttc 28343650
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                            
Query: 268      tttcacttgccagtgataaatggatggctaagtgcctgtgatacggttatcctcttatct 327
                ||||||||||||||||| ||||||||||| ||||| | ||  || || |||||||| | |
Sbjct: 28434892 tttcacttgccagtgatgaatggatggctgagtgcttctggcacagtaatcctcttcttt 28434951

                                       
Query: 328      ggatctaagacaaatattttttc 350
                |||||||  ||||||||||||||
Sbjct: 28434952 ggatctagcacaaatattttttc 28434974
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>ref|XM_469502.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2634

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                        
Query: 270  tcacttgccagtgataaatggatggctaagtgcctgtgatacggttatcctcttatctgg 329
            ||||||||||||||| ||||||||||| ||||| | ||  || || |||||||| | |||
Sbjct: 2634 tcacttgccagtgatgaatggatggctgagtgcttctggcacagtaatcctcttctttgg 2575

                                 
Query: 330  atctaagacaaatattttttc 350
            |||||  ||||||||||||||
Sbjct: 2574 atctagcacaaatattttttc 2554
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>dbj|AK069094.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006I05, full
            insert sequence
          Length = 3778

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                        
Query: 278  cagtgataaatggatggctaagtgcctgtgatacggttatcctcttatctggatctaaga 337
            ||||||| ||||||||||| ||||| | ||  || || |||||||| | ||||||||  |
Sbjct: 2879 cagtgatgaatggatggctgagtgcttctggcacagtaatcctcttctttggatctagca 2820

                         
Query: 338  caaatattttttc 350
            |||||||||||||
Sbjct: 2819 caaatattttttc 2807
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>gb|AC087903.26| Mus musculus strain C57BL/6J clone rp23-4p7 map 3, complete sequence
          Length = 183094

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 270   tcacttgccagtgataaatggat 292
             |||||||||||||||||||||||
Sbjct: 80777 tcacttgccagtgataaatggat 80799
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>gb|AC108750.3| Homo sapiens 3 BAC RP11-249L12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 155484

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 355    aggtctttaaaattggagagcattttc 381
              ||||||||||||||||||| |||||||
Sbjct: 124754 aggtctttaaaattggagatcattttc 124728
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>gb|AC158989.1| Mus musculus BAC clone RP23-399H20 from chromosome 3, complete sequence
          Length = 190372

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 270   tcacttgccagtgataaatggat 292
             |||||||||||||||||||||||
Sbjct: 32867 tcacttgccagtgataaatggat 32845
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>gb|AC150033.2| Mus musculus BAC clone RP23-449N19 from 3, complete sequence
          Length = 179293

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 270    tcacttgccagtgataaatggat 292
              |||||||||||||||||||||||
Sbjct: 166252 tcacttgccagtgataaatggat 166274
to top
>ref|XM_629078.1| Dictyostelium discoideum hypothetical protein (DDB0192076), partial
            mRNA
          Length = 1245

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 15   aaatcattagaaaaatgtatac 36
            ||||||||||||||||||||||
Sbjct: 986  aaatcattagaaaaatgtatac 1007
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>gb|AC131185.4| Mus musculus BAC clone RP23-402H1 from chromosome 19, complete sequence
          Length = 208584

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 398   aatttgaaaccaaagaaccaaa 419
             ||||||||||||||||||||||
Sbjct: 77987 aatttgaaaccaaagaaccaaa 78008
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>gb|AC149086.4| Mus musculus BAC clone RP24-245L1 from 19, complete sequence
          Length = 185283

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 398    aatttgaaaccaaagaaccaaa 419
              ||||||||||||||||||||||
Sbjct: 164664 aatttgaaaccaaagaaccaaa 164685
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>gb|AF106591.3| Caenorhabditis elegans cosmid T01A4, complete sequence
          Length = 44436

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 400   tttgaaaccaaagaaccaaaa 420
             |||||||||||||||||||||
Sbjct: 20283 tttgaaaccaaagaaccaaaa 20263
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>gb|AC101902.9| Mus musculus chromosome 1, clone RP24-147M23, complete sequence
          Length = 223784

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 347  tttcaagaaggtctttaaaattgga 371
            |||||| ||||||||||||||||||
Sbjct: 5569 tttcaacaaggtctttaaaattgga 5545
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>ref|XM_721142.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00677)
            partial mRNA
          Length = 2211

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 14   taaatcattagaaaaatgtat 34
            |||||||||||||||||||||
Sbjct: 1371 taaatcattagaaaaatgtat 1391
to top
>gb|AC155947.8| Mus musculus 6 BAC RP24-417N21 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 156871

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 122   agccatctcttcagcaacccc 142
             |||||||||||||||||||||
Sbjct: 35807 agccatctcttcagcaacccc 35827
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>gb|AC153374.5| Mus musculus 6 BAC RP23-281H4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 204379

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 122    agccatctcttcagcaacccc 142
              |||||||||||||||||||||
Sbjct: 173998 agccatctcttcagcaacccc 174018
to top
>gb|AC006414.6|AC006414 Drosophila melanogaster, chromosome 3R, region 89A1-89A5, BAC clone
             BACR48G17, complete sequence
          Length = 179122

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 333   taagacaaatattttttcaag 353
             |||||||||||||||||||||
Sbjct: 37962 taagacaaatattttttcaag 37942
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>gb|AE003710.2| Drosophila melanogaster chromosome 3R, section 48 of 118 of the
             complete sequence
          Length = 224071

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 333   taagacaaatattttttcaag 353
             |||||||||||||||||||||
Sbjct: 27192 taagacaaatattttttcaag 27172
to top
>gb|AC132258.3| Mus musculus BAC clone RP24-361F13 from 1, complete sequence
          Length = 130493

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 347   tttcaagaaggtctttaaaattgga 371
             |||||| ||||||||||||||||||
Sbjct: 93730 tttcaacaaggtctttaaaattgga 93706
to top
>ref|XM_518652.1| PREDICTED: Pan troglodytes activating signal cointegrator 1 complex
            subunit 3 (LOC462898), mRNA
          Length = 6669

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 270  tcacttgccagtgataaatg 289
            ||||||||||||||||||||
Sbjct: 6153 tcacttgccagtgataaatg 6172
to top
>gb|AC161598.4| Mus musculus BAC clone RP23-360G8 from chromosome 7, complete sequence
          Length = 216748

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 340    aatattttttcaagaaggtcttta 363
              |||||||||| |||||||||||||
Sbjct: 197594 aatattttttaaagaaggtcttta 197571
to top
>gb|BC039857.1| Homo sapiens activating signal cointegrator 1 complex subunit 3,
           mRNA (cDNA clone IMAGE:4539514)
          Length = 1548

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 tcacttgccagtgataaatg 289
           ||||||||||||||||||||
Sbjct: 366 tcacttgccagtgataaatg 385
to top
>gb|AC134573.5| Mus musculus BAC clone RP23-460N10 from chromosome 7, complete sequence
          Length = 177808

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 340   aatattttttcaagaaggtcttta 363
             |||||||||| |||||||||||||
Sbjct: 96888 aatattttttaaagaaggtcttta 96911
to top
>ref|NM_006828.2| Homo sapiens activating signal cointegrator 1 complex subunit 3
            (ASCC3), transcript variant 1, mRNA
          Length = 7598

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 270  tcacttgccagtgataaatg 289
            ||||||||||||||||||||
Sbjct: 6422 tcacttgccagtgataaatg 6441
to top
>gb|AC142504.2| Mus musculus BAC clone RP24-132F22 from chromosome 9, complete sequence
          Length = 174426

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 407   ccaaagaaccaaaatccttc 426
             ||||||||||||||||||||
Sbjct: 21309 ccaaagaaccaaaatccttc 21290
to top
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 437     tgagaatcaacttccgcata 456
               ||||||||||||||||||||
Sbjct: 2540109 tgagaatcaacttccgcata 2540128
to top
>gb|AC129221.3| Mus musculus BAC clone RP24-480M20 from chromosome 7, complete sequence
          Length = 202119

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 340   aatattttttcaagaaggtcttta 363
             |||||||||| |||||||||||||
Sbjct: 64865 aatattttttaaagaaggtcttta 64888
to top
>gb|AC110262.12| Mus musculus chromosome 17, clone RP23-291L10, complete sequence
          Length = 210850

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    ccatctcttcagcaacccca 143
              ||||||||||||||||||||
Sbjct: 118229 ccatctcttcagcaacccca 118248
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>gb|AC127576.3| Mus musculus BAC clone RP24-242F12 from chromosome 7, complete sequence
          Length = 169210

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 340   aatattttttcaagaaggtcttta 363
             |||||||||| |||||||||||||
Sbjct: 28702 aatattttttaaagaaggtcttta 28725
to top
>gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 2 of
              11 of the complete sequence
          Length = 613322

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 362    taaaattggagagcattttc 381
              ||||||||||||||||||||
Sbjct: 456061 taaaattggagagcattttc 456042
to top
>gb|AC164645.4| Mus musculus BAC clone RP24-478G6 from chromosome 7, complete sequence
          Length = 211510

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 340   aatattttttcaagaaggtcttta 363
             |||||||||| |||||||||||||
Sbjct: 77590 aatattttttaaagaaggtcttta 77613
to top
>gb|BC014358.1| Homo sapiens activating signal cointegrator 1 complex subunit 3,
           mRNA (cDNA clone IMAGE:3828119), with apparent retained
           intron
          Length = 1332

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 tcacttgccagtgataaatg 289
           ||||||||||||||||||||
Sbjct: 133 tcacttgccagtgataaatg 152
to top
>emb|Z86062.1|HS121G13 Human DNA sequence from clone RP1-121G13 on chromosome 6q16 Contains the
              3' end of the RNAH gene for an RNA helicase, the 5' end of
              the SIM1 gene for single-minded homolog 1 (Drosophila), an
              RP42 homolog pseudogene a novel gene and three CpG islands,
              complete sequence
          Length = 176932

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 270    tcacttgccagtgataaatg 289
              ||||||||||||||||||||
Sbjct: 112492 tcacttgccagtgataaatg 112473
to top
>emb|AL354763.17| Human DNA sequence from clone RP11-357L1 on chromosome 13 Contains an
              ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G
              variant 1 (ATP6V1G1) pseudogene, complete sequence
          Length = 192963

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 362    taaaattggagagcattttc 381
              ||||||||||||||||||||
Sbjct: 182607 taaaattggagagcattttc 182588
to top
>emb|AL161899.21| Human DNA sequence from clone RP11-418I10 on chromosome 13, complete
             sequence
          Length = 159981

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   aaggtctttaaaattggaga 373
             ||||||||||||||||||||
Sbjct: 33186 aaggtctttaaaattggaga 33167
to top
>emb|AL136126.34| Human DNA sequence from clone RP1-89D4 on chromosome 11p12-14.1,
             complete sequence
          Length = 78947

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    aatcattagaaaaatgtata 35
             ||||||||||||||||||||
Sbjct: 65805 aatcattagaaaaatgtata 65786
to top
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome
          Length = 2414465

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 339   aaatattttttcaagaaggtcttt 362
             |||||||||||||||||| |||||
Sbjct: 12843 aaatattttttcaagaagatcttt 12866
to top
>emb|AL834463.1|HSM805565 Homo sapiens mRNA; cDNA DKFZp762E1710 (from clone DKFZp762E1710)
          Length = 7315

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 270  tcacttgccagtgataaatg 289
            ||||||||||||||||||||
Sbjct: 6131 tcacttgccagtgataaatg 6150
to top
>gb|AY013288.1| Homo sapiens ASC-1 complex subunit P200 mRNA, partial cds
          Length = 6450

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 270  tcacttgccagtgataaatg 289
            ||||||||||||||||||||
Sbjct: 5265 tcacttgccagtgataaatg 5284
to top
>gb|AC108149.4| Homo sapiens BAC clone RP11-473D12 from 4, complete sequence
          Length = 86324

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   caaattgtagtttacaatgt 246
             ||||||||||||||||||||
Sbjct: 34930 caaattgtagtttacaatgt 34949
to top
>gb|AC159741.2| Mus musculus BAC clone RP23-178B21 from chromosome 9, complete sequence
          Length = 185878

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   ccaaagaaccaaaatccttc 426
             ||||||||||||||||||||
Sbjct: 48141 ccaaagaaccaaaatccttc 48160
to top
>gb|AC019086.7| Homo sapiens BAC clone RP11-360H4 from 2, complete sequence
          Length = 199934

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 430    ttgatgttgagaatcaactt 449
              ||||||||||||||||||||
Sbjct: 101887 ttgatgttgagaatcaactt 101906
to top
>gb|AC133647.3| Mus musculus BAC clone RP23-287D22 from chromosome 7, complete sequence
          Length = 197003

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 340    aatattttttcaagaaggtcttta 363
              |||||||||| |||||||||||||
Sbjct: 179242 aatattttttaaagaaggtcttta 179265
to top
>dbj|AK111649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134M11, full
            insert sequence
          Length = 2606

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 321  cttatctggatctaagacaa 340
            ||||||||||||||||||||
Sbjct: 2213 cttatctggatctaagacaa 2194
to top
>emb|AJ338745.1|HSA338745 Homo sapiens genomic sequence surrounding NotI site, clone NB1-045C
          Length = 1245

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 284 taaatggatggctaagtgcctgtg 307
           |||||||||||||| |||||||||
Sbjct: 375 taaatggatggctatgtgcctgtg 352
to top
>emb|AJ223948.1|HSA223948 Homo sapiens mRNA for putative RNA helicase, 3' end
          Length = 4470

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 270  tcacttgccagtgataaatg 289
            ||||||||||||||||||||
Sbjct: 3285 tcacttgccagtgataaatg 3304
to top
>emb|CR786571.6| Zebrafish DNA sequence from clone DKEY-234L24 in linkage group 4,
              complete sequence
          Length = 182259

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     aatcattagaaaaatgtata 35
              ||||||||||||||||||||
Sbjct: 181984 aatcattagaaaaatgtata 182003
to top
>emb|AM235388.1| Lupinus albus mRNA for auxin efflux carrier (pin2 gene)
          Length = 1882

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 341 atattttttcaagaaggtct 360
           ||||||||||||||||||||
Sbjct: 666 atattttttcaagaaggtct 685
to top
>gb|AC149056.6| Mus musculus BAC clone RP23-344G11 from chromosome 7, complete sequence
          Length = 199549

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 340    aatattttttcaagaaggtcttta 363
              |||||||||| |||||||||||||
Sbjct: 156613 aatattttttaaagaaggtcttta 156636
to top
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 132733

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 321    cttatctggatctaagacaa 340
              ||||||||||||||||||||
Sbjct: 115558 cttatctggatctaagacaa 115539
to top
>emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260_B01 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 135793

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 321  cttatctggatctaagacaa 340
            ||||||||||||||||||||
Sbjct: 7641 cttatctggatctaagacaa 7622
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>gb|AC005138.1|AC005138 Homo sapiens chromosome 17, clone hRPK.261_A_13, complete sequence
          Length = 145618

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 344   ttttttcaagaaggtctttaaaat 367
             |||||| |||||||||||||||||
Sbjct: 73307 ttttttaaagaaggtctttaaaat 73330
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>gb|AC149869.2| Mus musculus BAC clone RP23-3E12 from 7, complete sequence
          Length = 195392

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 340    aatattttttcaagaaggtcttta 363
              |||||||||| |||||||||||||
Sbjct: 138396 aatattttttaaagaaggtcttta 138419
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>emb|AL928835.6| Zebrafish DNA sequence from clone CH211-201P7 in linkage group 1,
              complete sequence
          Length = 182427

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    caaattgtagtttacaatgt 246
              ||||||||||||||||||||
Sbjct: 126465 caaattgtagtttacaatgt 126446
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>emb|CR854857.19| Zebrafish DNA sequence from clone CH211-129F7 in linkage group 13,
              complete sequence
          Length = 170079

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 336    gacaaatattttttcaagaa 355
              ||||||||||||||||||||
Sbjct: 119484 gacaaatattttttcaagaa 119465


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,202,536
Number of Sequences: 3902068
Number of extensions: 5202536
Number of successful extensions: 108743
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108378
Number of HSP's gapped (non-prelim): 347
length of query: 457
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 435
effective length of database: 17,147,199,772
effective search space: 7459031900820
effective search space used: 7459031900820
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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