Clone Name | rbastl29f12 |
---|---|
Clone Library Name | barley_pub |
>gb|AC150566.16| Medicago truncatula clone mth2-21o10, complete sequence Length = 130981 Score = 40.1 bits (20), Expect = 0.99 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 aataggggtggtatgtgtttgttt 90 |||| ||||||||||||||||||| Sbjct: 38985 aatatgggtggtatgtgtttgttt 39008
>gb|AC151353.2| Xenopus tropicalis clone ISB-4M1, complete sequence Length = 110908 Score = 40.1 bits (20), Expect = 0.99 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cagtaacaaacaatggtaca 56 |||||||||||||||||||| Sbjct: 67603 cagtaacaaacaatggtaca 67622
>emb|BX294189.11| Zebrafish DNA sequence from clone CH211-218D20 in linkage group 9, complete sequence Length = 194025 Score = 40.1 bits (20), Expect = 0.99 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 accattaatcaaatcaaatc 34 |||||||||||||||||||| Sbjct: 86074 accattaatcaaatcaaatc 86055
>dbj|AP006538.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT18J10, TM0323a, complete sequence Length = 95559 Score = 40.1 bits (20), Expect = 0.99 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 accattaatcaaatcaaatc 34 |||||||||||||||||||| Sbjct: 85715 accattaatcaaatcaaatc 85734
>emb|CR524823.17| Zebrafish DNA sequence from clone CH211-150A18 in linkage group 16, complete sequence Length = 155638 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 gggtggtatgtgtttgttt 90 ||||||||||||||||||| Sbjct: 37655 gggtggtatgtgtttgttt 37673
>emb|CR847786.13| Zebrafish DNA sequence from clone DKEYP-9B4 in linkage group 13, complete sequence Length = 156551 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 gggtggtatgtgtttgttt 90 ||||||||||||||||||| Sbjct: 90932 gggtggtatgtgtttgttt 90914
>emb|BX927231.12| Zebrafish DNA sequence from clone DKEYP-26F11 in linkage group 19, complete sequence Length = 104269 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 gggtggtatgtgtttgttt 90 ||||||||||||||||||| Sbjct: 95122 gggtggtatgtgtttgttt 95104
>emb|BX936318.10| Zebrafish DNA sequence from clone CH211-229O17 in linkage group 13, complete sequence Length = 158912 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 gggtggtatgtgtttgttt 90 ||||||||||||||||||| Sbjct: 14304 gggtggtatgtgtttgttt 14286
>gb|AC158994.4| Mus musculus BAC clone RP24-79P8 from chromosome 5, complete sequence Length = 201330 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 atcaaatcaaatctccagt 40 ||||||||||||||||||| Sbjct: 83047 atcaaatcaaatctccagt 83065
>emb|BX005008.12| Zebrafish DNA sequence from clone DKEY-29K15 in linkage group 14, complete sequence Length = 208014 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 gggtggtatgtgtttgttt 90 ||||||||||||||||||| Sbjct: 181910 gggtggtatgtgtttgttt 181892
>emb|BX324233.5| Zebrafish DNA sequence from clone CH211-230L11 in linkage group 22, complete sequence Length = 157470 Score = 38.2 bits (19), Expect = 3.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 8 gtagttcaccattaatcaaatcaaatc 34 |||||||||||||| |||||| ||||| Sbjct: 38247 gtagttcaccattattcaaataaaatc 38273
>emb|BX247907.8| Zebrafish DNA sequence from clone CH211-232D19 in linkage group 8, complete sequence Length = 169530 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 gggtggtatgtgtttgttt 90 ||||||||||||||||||| Sbjct: 124689 gggtggtatgtgtttgttt 124671
>gb|AC151847.4| Ornithorhynchus anatinus BAC clone OABb-156A1 from chromosome unknown, complete sequence Length = 120614 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 49 atggtacaaggatggcaca 67 ||||||||||||||||||| Sbjct: 103190 atggtacaaggatggcaca 103172
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 taacaaacaatggtacaag 58 ||||||||||||||||||| Sbjct: 541663 taacaaacaatggtacaag 541681
>emb|AL844185.9| Zebrafish DNA sequence from clone DKEY-30H22, complete sequence Length = 180872 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 gggtggtatgtgtttgttt 90 ||||||||||||||||||| Sbjct: 135446 gggtggtatgtgtttgttt 135464
>emb|AL671977.8| Mouse DNA sequence from clone RP23-171A16 on chromosome X, complete sequence Length = 193108 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 73 ggtggtatgtgtttgtttg 91 ||||||||||||||||||| Sbjct: 97635 ggtggtatgtgtttgtttg 97653
>emb|AL592403.6| Mouse DNA sequence from clone RP23-90A8 on chromosome 1, complete sequence Length = 165527 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 cattaatcaaatcaaatct 35 ||||||||||||||||||| Sbjct: 128756 cattaatcaaatcaaatct 128774 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 927,609 Number of Sequences: 3902068 Number of extensions: 927609 Number of successful extensions: 71279 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71229 Number of HSP's gapped (non-prelim): 50 length of query: 91 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 70 effective length of database: 17,151,101,840 effective search space: 1200577128800 effective search space used: 1200577128800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)