ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl29f11 |
|---|---|
| Clone Library Name | barley_pub |
>SYV_RAT (Q04462) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 1264 Score = 37.7 bits (86), Expect = 0.007 Identities = 21/50 (42%), Positives = 26/50 (52%) Frame = -3 Query: 320 KRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 171 KR E Q+ L ++ ASGY K P VQE D KL +LR + EA Sbjct: 1207 KRSEAQRQAQRLQERRAASGYSAKVPLEVQEADEVKLQQTEAELRKVDEA 1256
>SYV_FUGRU (P49696) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 1217 Score = 37.4 bits (85), Expect = 0.009 Identities = 18/50 (36%), Positives = 28/50 (56%) Frame = -3 Query: 320 KRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 171 K+ +++K LS+K+ Y+EK P VQE+D KL +L + EA Sbjct: 1160 KKTDLEKQIEKLSEKISKGDYKEKVPVKVQEQDTEKLRQSQTELEKVKEA 1209
>SYV_HUMAN (P26640) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) (Protein G7a) Length = 1264 Score = 36.2 bits (82), Expect = 0.021 Identities = 21/50 (42%), Positives = 26/50 (52%) Frame = -3 Query: 320 KRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 171 KR E Q+ L ++ ASGY K P VQE D KL +LR + EA Sbjct: 1207 KRVEAQRQAQRLRERRAASGYPVKVPLEVQEADEAKLQQTEAELRKVDEA 1256
>SYV_MOUSE (Q9Z1Q9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) (Protein G7a) Length = 1263 Score = 36.2 bits (82), Expect = 0.021 Identities = 20/50 (40%), Positives = 25/50 (50%) Frame = -3 Query: 320 KRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 171 KR E Q+ L ++ AS Y K P VQE D KL +LR + EA Sbjct: 1206 KRSEAQRQAQRLQERRAASSYSAKVPLEVQEADEAKLQQTEAELRKVDEA 1255
>SYV_ARATH (P93736) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 1108 Score = 33.9 bits (76), Expect = 0.10 Identities = 16/56 (28%), Positives = 28/56 (50%) Frame = -3 Query: 320 KRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKLDA 153 K E+QK + L + M S Y EK P +++E++ KL ++ + +L A Sbjct: 1045 KIGELQKQKEKLQKMMSVSTYEEKVPANIKEDNANKLAKILQEFDFFEKESARLAA 1100
>SYV_ACIAD (Q6F8F0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 971 Score = 33.9 bits (76), Expect = 0.10 Identities = 18/57 (31%), Positives = 32/57 (56%) Frame = -3 Query: 323 KKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKLDA 153 K D++QK ++ K+ G+ KAP +V E + KL F +QL I ++ +++ A Sbjct: 914 KDLDKVQKQHDQIASKLANEGFVAKAPAAVVEGEKVKLAEFADQLVKIKQSMEQIAA 970
>HLYB_TREHY (Q54316) Hemolysin B| Length = 828 Score = 29.6 bits (65), Expect(2) = 0.28 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Frame = -3 Query: 323 KKRDEIQKLQHALSQKME-ASGYREKAPPSVQEEDMRKLTAFFEQL---RVIGEAEKKL 159 K RDEI LQ LS+K E REK ++E+D+R + + + R++ K+L Sbjct: 450 KIRDEITSLQEELSKKEEKCREEREKIETFIEEDDIRHVISEITNIPIKRLLNSESKRL 508 Score = 21.6 bits (44), Expect(2) = 0.28 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 3/38 (7%) Frame = -2 Query: 132 VGSLFLLGPTGI---FVWKLILHLFFADGGDVTFIENS 28 +GS LGPTG+ + K++ F D + I+ S Sbjct: 547 LGSFIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMS 584
>SYV_THETH (P96142) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 862 Score = 32.3 bits (72), Expect = 0.31 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = -3 Query: 323 KKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 171 K+ E+ L +K+ + G+REKAP V E + +L EQ I EA Sbjct: 807 KRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIREA 857
>SYV_THET8 (Q5SJ45) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 862 Score = 32.3 bits (72), Expect = 0.31 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = -3 Query: 323 KKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 171 K+ E+ L +K+ + G+REKAP V E + +L EQ I EA Sbjct: 807 KRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIREA 857
>SYV_THET2 (Q72JG7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 862 Score = 32.3 bits (72), Expect = 0.31 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = -3 Query: 323 KKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 171 K+ E+ L +K+ + G+REKAP V E + +L EQ I EA Sbjct: 807 KRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLRENLEQAERIREA 857
>SYV_CARHZ (Q3AF87) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 878 Score = 32.3 bits (72), Expect = 0.31 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = -3 Query: 287 LSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVI 180 L+QK+ G+ KAP V ++ KLTAF+ + V+ Sbjct: 832 LNQKLNNPGFLAKAPAEVVNKEREKLTAFYREKEVL 867
>UBIE_BRUME (Q8YDE4) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE| (EC 2.1.1.-) Length = 269 Score = 32.0 bits (71), Expect = 0.40 Identities = 15/42 (35%), Positives = 27/42 (64%) Frame = +3 Query: 189 QLLEKGGELPHVLLLDTGGSLLSVTGRFHLLRQGML*LLDFI 314 +++E G HV +LD GS+L V GR +++G++ L+F+ Sbjct: 98 RIVEASGRQAHVTILDINGSMLGV-GRERAIKKGLIDNLEFV 138
>UBIE_BRUSU (Q8FUZ3) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE| (EC 2.1.1.-) Length = 269 Score = 31.6 bits (70), Expect = 0.52 Identities = 15/42 (35%), Positives = 27/42 (64%) Frame = +3 Query: 189 QLLEKGGELPHVLLLDTGGSLLSVTGRFHLLRQGML*LLDFI 314 +++E G HV +LD GS+L V GR +++G++ L+F+ Sbjct: 98 RIVEVSGRQAHVTILDINGSMLGV-GRERAIKKGLIDNLEFV 138
>SYV_NEIMB (Q9K1H7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 945 Score = 31.6 bits (70), Expect = 0.52 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -3 Query: 323 KKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 159 K+ +++QK L+ K+ GY EKAP + E+D L +++ + KL Sbjct: 889 KEAEKLQKALDKLNAKLSKPGYTEKAPAHLVEKDKADLAELEDKMAKVQNQLAKL 943
>SYV_NEIMA (Q9JX22) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 945 Score = 31.6 bits (70), Expect = 0.52 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -3 Query: 323 KKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 159 K+ +++QK L+ K+ GY EKAP + E+D L +++ + KL Sbjct: 889 KEAEKLQKALDKLNAKLSKPGYTEKAPAHLVEKDKADLAELEDKMAKVQTQLSKL 943
>SYV_NEIG1 (Q5F5W0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 945 Score = 31.6 bits (70), Expect = 0.52 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -3 Query: 323 KKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 159 K+ +++QK L+ K+ GY EKAP + E+D L +++ + KL Sbjct: 889 KEAEKLQKALDKLNAKLSKPGYTEKAPAHLVEKDKADLAELEDKMAKVQNQLAKL 943
>SYV_PELCD (Q3A253) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 899 Score = 30.4 bits (67), Expect = 1.2 Identities = 17/57 (29%), Positives = 32/57 (56%) Frame = -3 Query: 323 KKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKLDA 153 K+ +++K S+K+ + KAP +V E+D +KL E+L ++ + +KL A Sbjct: 841 KEIAKVEKDVLMFSKKLSNESFLAKAPAAVLEKDRQKLADAEEKLSILKQGLEKLAA 897
>SYV_BACHD (Q9K8G8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 29.6 bits (65), Expect = 2.0 Identities = 14/55 (25%), Positives = 29/55 (52%) Frame = -3 Query: 323 KKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 159 K+ ++++K + +K+ G+ KAP V EE+ +K + E+ + K+L Sbjct: 824 KEENKLEKEVERVQKKLSNQGFLAKAPEKVIEEERKKEADYLEKRAAVRARIKEL 878
>CD2AP_HUMAN (Q9Y5K6) CD2-associated protein (Cas ligand with multiple SH3| domains) (Adapter protein CMS) Length = 639 Score = 28.5 bits (62), Expect = 4.4 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Frame = +3 Query: 60 PQKKGAVSTSKQKCQ*VPI---ETESRLKSTARLRI*FLLSLTDDPQLLEKGGELPHVLL 230 P+K + + K Q V I +TE ++K+ R F T++ +L K GE+ H++ Sbjct: 241 PEKPLILQSLGPKTQSVEITKTDTEGKIKAKEYCRTLFAYEGTNEDELTFKEGEIIHLIS 300 Query: 231 LDTG 242 +TG Sbjct: 301 KETG 304
>SYV_GEOKA (Q5KWL3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = -3 Query: 323 KKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVI 180 K+ D+ K + +K+ G+ KAP V EE+ RK + E+ + Sbjct: 824 KELDKWNKEVERVEKKLANEGFLAKAPAHVVEEERRKRQDYIEKREAV 871
>SYV_BACST (P11931) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = -3 Query: 323 KKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVI 180 K+ D+ K + +K+ G+ KAP V EE+ RK + E+ + Sbjct: 824 KELDKWNKEVERVEKKLANEGFLAKAPAHVVEEERRKRQDYIEKREAV 871
>MYH7_HUMAN (P12883) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1935 Score = 28.1 bits (61), Expect = 5.8 Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Frame = -3 Query: 311 EIQKLQHAL-SQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 159 E++K++ L ++KME E+A S++ E+ + L A E ++ E E+KL Sbjct: 1525 ELEKVRKQLEAEKMELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERKL 1576
>Y4417_BACTN (Q89ZG0) UPF0144 protein BT_4417| Length = 511 Score = 28.1 bits (61), Expect = 5.8 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 6/51 (11%) Frame = -3 Query: 323 KKRDEIQKLQHALSQKMEA-SGY-----REKAPPSVQEEDMRKLTAFFEQL 189 KK++E+ KLQH +K+EA SG +E+ S++EE + +F + Sbjct: 119 KKKEELDKLQHQEIEKLEAISGLSADEAKERLVESLKEEAKTQAQSFINDI 169
>UBIE_RHIME (Q92SK7) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE| (EC 2.1.1.-) Length = 258 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = +3 Query: 189 QLLEKGGELPHVLLLDTGGSLLSVTGRFHLLRQGML*LLDFI 314 +++E+ G H +LD GS+LSV G ++G+ LDF+ Sbjct: 87 RIVERSGRKAHATVLDINGSMLSV-GAERARKKGIEANLDFV 127
>MYH7_MESAU (P13540) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1934 Score = 28.1 bits (61), Expect = 5.8 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = -3 Query: 323 KKRDEIQKLQHAL-SQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 159 K E++K++ L ++KME E+A S++ E+ L A E ++ E E+KL Sbjct: 1520 KSIHELEKIRKQLEAEKMELQSALEEAEASLEHEEGNILRAQLEFNQIKAEIERKL 1575
>SYV_CHRVO (Q7NUM8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 939 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/48 (29%), Positives = 26/48 (54%) Frame = -3 Query: 323 KKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVI 180 K++ +++ L+ K+E GY +KAP + E D +L ++L I Sbjct: 884 KEQGKVEAELAKLTAKLEKPGYVDKAPAHLVERDKAQLAELNDKLEKI 931
>MYH6_MESAU (P13539) Myosin heavy chain, cardiac muscle alpha isoform| (MyHC-alpha) Length = 1939 Score = 28.1 bits (61), Expect = 5.8 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = -3 Query: 323 KKRDEIQKLQHALS-QKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 159 K E++K++ L +KME E+A S++ E+ + L A E ++ E E+KL Sbjct: 1523 KNVHELEKVRKQLEVEKMELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERKL 1578
>DJLA_SHEON (Q8EB99) DnaJ-like protein djlA| Length = 262 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -3 Query: 263 GYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 162 G+ KA V E D+R T +Q+R+ G+A K+ Sbjct: 65 GHVAKASGRVTETDIRIATLLMDQMRLTGDARKE 98
>SYV_PASMU (Q9CMK5) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 954 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/57 (26%), Positives = 32/57 (56%) Frame = -3 Query: 323 KKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKLDA 153 K + EIQ++++ L+ + + KAPP+V E++ K+ + E L + + ++A Sbjct: 901 KYQGEIQRIENKLANE----AFVAKAPPAVIEKERAKMAEYAEGLNKLKQQYLAIEA 953
>MYH7_RAT (P02564) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1935 Score = 27.7 bits (60), Expect = 7.5 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Frame = -3 Query: 323 KKRDEIQKLQHAL-SQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 159 K E++K++ L ++K+E E+A S++ E+ + L A E ++ E E+KL Sbjct: 1521 KSIHELEKIRKQLEAEKLELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERKL 1576
>SYV_PSEU2 (Q4ZXI0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 27.7 bits (60), Expect = 7.5 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = -3 Query: 311 EIQKLQHALSQ---KMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 159 EIQ+LQ + + K+ + + +KAPP V ++ KLT + L + E ++ Sbjct: 892 EIQRLQGEVQRVGGKLSNAAFVDKAPPEVIAKERAKLTEAEQALGKLAEQHARI 945
>SYV_PSESM (Q887M3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 27.7 bits (60), Expect = 7.5 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = -3 Query: 311 EIQKLQHALSQ---KMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 159 EIQ+LQ + + K+ + + +KAPP V ++ KLT + L + E ++ Sbjct: 892 EIQRLQGEVQRVGGKLSNAAFVDKAPPDVIAKERAKLTEAEQALGKLAEQHARI 945
>SYV_PSEPK (Q88P76) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 27.7 bits (60), Expect = 7.5 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = -3 Query: 311 EIQKLQHALSQ---KMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKLDA 153 EIQ+LQ + + K+ + + +KAPP+V E++ KL + L E ++ A Sbjct: 892 EIQRLQGEVQRVGGKLSNTAFVDKAPPAVIEKERAKLAESEQALANFTEQHARIAA 947
>SYV_PSE14 (Q48MF2) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 27.7 bits (60), Expect = 7.5 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = -3 Query: 311 EIQKLQHALSQ---KMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 159 EIQ+LQ + + K+ + + +KAPP V ++ KLT + L + E ++ Sbjct: 892 EIQRLQGEVQRVGGKLSNAAFVDKAPPEVIAKERAKLTEAEQALGKLAEQHARI 945
>SYV_THEMA (Q9X2D7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 865 Score = 27.7 bits (60), Expect = 7.5 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -3 Query: 314 DEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQL 189 ++IQK L +K+ + EKAP V EE KL E+L Sbjct: 813 EKIQKEIDRLEKKLANKDFVEKAPEEVVEETKEKLNTNRERL 854
>GATD_METAC (Q8TR66) Glutamyl-tRNA(Gln) amidotransferase subunit D (EC 6.3.5.-)| (Glu-ADT subunit D) Length = 424 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/27 (40%), Positives = 19/27 (70%) Frame = +3 Query: 177 TDDPQLLEKGGELPHVLLLDTGGSLLS 257 T++ +L E G +LP + +L TGG++ S Sbjct: 71 TNEEELPEPGKKLPKIAILSTGGTIAS 97
>PERQ1_HUMAN (O75420) PERQ amino acid rich with GYF domain protein 1| Length = 817 Score = 27.3 bits (59), Expect = 9.8 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 8/50 (16%) Frame = -3 Query: 305 QKLQHALSQKMEASGYREKA--------PPSVQEEDMRKLTAFFEQLRVI 180 Q LQ S+++ REKA PP ++ ++LTAF +QL+ + Sbjct: 448 QFLQLVSSRQLPQCALREKAALGDLTPPPPPPPQQQQQQLTAFLQQLQAL 497
>SYV_BACSK (Q5WEQ4) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 27.3 bits (59), Expect = 9.8 Identities = 15/57 (26%), Positives = 28/57 (49%) Frame = -3 Query: 323 KKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKLDA 153 K+ D++ K + +K+ G+ KAP V EE+ K + + + + E +L A Sbjct: 824 KELDKLNKEVERIEKKLNNQGFLAKAPSHVVEEEKAKQQDYAAKRQTVIERIAELKA 880
>MYH6_RAT (P02563) Myosin heavy chain, cardiac muscle alpha isoform| (MyHC-alpha) Length = 1938 Score = 27.3 bits (59), Expect = 9.8 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = -3 Query: 323 KKRDEIQKLQHALS-QKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 159 K E++K++ L +K+E E+A S++ E+ + L A E ++ E E+KL Sbjct: 1522 KNVHELEKIRKQLEVEKLELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERKL 1577
>MYH6_MOUSE (Q02566) Myosin heavy chain, cardiac muscle alpha isoform| (MyHC-alpha) Length = 1938 Score = 27.3 bits (59), Expect = 9.8 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = -3 Query: 323 KKRDEIQKLQHALS-QKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 159 K E++K++ L +K+E E+A S++ E+ + L A E ++ E E+KL Sbjct: 1523 KNVHELEKIRKQLEVEKLELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERKL 1578
>UBIE_BARHE (Q6G577) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE| (EC 2.1.1.-) Length = 260 Score = 27.3 bits (59), Expect = 9.8 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = +3 Query: 189 QLLEKGGELPHVLLLDTGGSLLSVTGRFHLLRQGML*LLDFI 314 ++L + H +LD GS+LSV G+ + G+ L+DF+ Sbjct: 89 RILNASRQKAHATVLDINGSMLSV-GKKRAEKNGLAPLIDFV 129 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,535,558 Number of Sequences: 219361 Number of extensions: 881977 Number of successful extensions: 2953 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 2913 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2953 length of database: 80,573,946 effective HSP length: 83 effective length of database: 62,366,983 effective search space used: 1496807592 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
