Clone Name | rbastl29f07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | KIF3C_HUMAN (O14782) Kinesin-like protein KIF3C | 30 | 3.7 | 2 | BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein sh... | 29 | 6.3 | 3 | VATC_DROME (Q9V7N5) Vacuolar ATP synthase subunit C (EC 3.6.3.14... | 28 | 8.2 |
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>KIF3C_HUMAN (O14782) Kinesin-like protein KIF3C| Length = 793 Score = 29.6 bits (65), Expect = 3.7 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%) Frame = -3 Query: 304 PDTSRPAASVASQANGVGGGRGDAA---KLKEMYRLSLKSSSLGQLHA 170 P+T+ AA+ +S G GGG G A + KE +++L S+LG + A Sbjct: 258 PNTAGGAATPSSGGGGGGGGSGGGAGGERPKEASKINLSLSALGNVIA 305
>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)| Length = 1206 Score = 28.9 bits (63), Expect = 6.3 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +3 Query: 51 YYTRQHDRHNSHKLQSNNISYTYSSHTVTGGSA 149 ++ QH H + Q ++S ++S TV GGSA Sbjct: 313 HHHHQHHNHQQQQQQQTSLSQGHASLTVAGGSA 345
>VATC_DROME (Q9V7N5) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C| subunit) (Vacuolar proton pump C subunit) Length = 714 Score = 28.5 bits (62), Expect = 8.2 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -3 Query: 304 PDTSRPAASVASQANGVGGGRGDAA 230 P TS AA+ AS ++G GGG G A+ Sbjct: 264 PSTSAAAAAAASNSSGGGGGGGPAS 288 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,408,375 Number of Sequences: 219361 Number of extensions: 736220 Number of successful extensions: 2434 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2371 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2434 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)