>EPSE1_RALSO (P58594) EPS I polysaccharide export inner membrane protein epsE|
          Length = 436

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +2

Query: 116 RSEIHLTFKSQNVSSYHLHLKMTSHWCCYMMLVPLCSGSH 235
           R E+ L FK    S     +    HW C  ML  +  G+H
Sbjct: 220 RQELRLAFKHALPSVLTTSMGAPVHWICLSMLAAMTDGAH 259

>ENV_MCFF3 (P03388) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Coat protein GP70; Spike protein p15E; R protein]
          Length = 640

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +2

Query: 134 TFKSQNVSSYHLHLKMTSHWCCYMMLVPLCSGSHLDFPRSFCV 262
           T +  +  SYHL     + W C   L P  S + LD    +CV
Sbjct: 370 TTQKTSDGSYHLAAPAGTIWACNTGLTPCLSTTVLDLTTDYCV 412

>SRD34_CAEEL (Q19975) Serpentine receptor class delta-34 (Protein srd-34)|
          Length = 339

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 92  AMPLCLFWQYNVATNIKTPNSTKN 21
           A+P  LF++Y   TNI   N TKN
Sbjct: 113 AIPATLFYKYTKVTNINMKNITKN 136

>YBD1_SCHPO (O42925) Hypothetical protein C16C6.01c in chromosome II|
          Length = 473

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +3

Query: 15  TCILSRIRCFYVSSY 59
           TC+L + RCFYV+SY
Sbjct: 184 TCVLVQSRCFYVNSY 198


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,556,167
Number of Sequences: 219361
Number of extensions: 859969
Number of successful extensions: 1824
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1824
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)