ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl29e11 |
|---|---|
| Clone Library Name | barley_pub |
>CARB_ANASP (Q8YQL2) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1104 Score = 54.3 bits (129), Expect = 1e-07 Identities = 23/46 (50%), Positives = 36/46 (78%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSIEILALQDY 280 D +RR LAYK+PIITT+ GA+AT+ AI+SM+N ++++ +Q+Y Sbjct: 1055 DARLIRRTGLAYKIPIITTIAGAKATVAAIRSMQNTTLDVKTIQEY 1100
>CARB_SYNY3 (Q55756) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1081 Score = 53.1 bits (126), Expect = 2e-07 Identities = 23/46 (50%), Positives = 36/46 (78%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSIEILALQDY 280 DG +RR AL YK+PIITT+ G +AT+ A++S+++ +++ ALQDY Sbjct: 1034 DGRTIRRAALDYKLPIITTIAGGKATVAALRSLQDHPLDVKALQDY 1079
>CARB_RHILO (Q98I87) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1167 Score = 44.7 bits (104), Expect = 9e-05 Identities = 22/47 (46%), Positives = 29/47 (61%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSIEILALQDYF 277 D LRR L KVP TT+ GA A +AI ++K S+E+ LQ+YF Sbjct: 1120 DSKSLRRATLMQKVPYYTTLSGAAAVAEAIAALKAGSLEVRPLQEYF 1166
>CARB2_METKA (Q8TUT7) Carbamoyl-phosphate synthase large chain, C-terminal| section (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain) Length = 542 Score = 43.5 bits (101), Expect = 2e-04 Identities = 19/45 (42%), Positives = 30/45 (66%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSIEILALQD 283 DG +RR A+ +KVP ITT+ A+A ++AI+ +K K + + L D Sbjct: 477 DGYAIRRAAVKFKVPYITTIAAAKAAVEAIELVKEKGVTVNCLHD 521
>CARB_BRUSU (Q8FZJ3) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1162 Score = 42.7 bits (99), Expect = 3e-04 Identities = 20/47 (42%), Positives = 29/47 (61%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSIEILALQDYF 277 D +RR L K+P TT+ GA + +AI ++K S+E+ LQDYF Sbjct: 1114 DSKSIRRATLMQKLPYYTTMAGAESAAEAIAALKAGSLEVRPLQDYF 1160
>CARB_BRUME (Q8YIC2) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1162 Score = 42.7 bits (99), Expect = 3e-04 Identities = 20/47 (42%), Positives = 29/47 (61%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSIEILALQDYF 277 D +RR L K+P TT+ GA + +AI ++K S+E+ LQDYF Sbjct: 1114 DSKSIRRATLMQKLPYYTTMAGAESAAEAIAALKAGSLEVRPLQDYF 1160
>CARB_RHIME (Q92PZ4) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1163 Score = 42.4 bits (98), Expect = 4e-04 Identities = 22/47 (46%), Positives = 28/47 (59%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSIEILALQDYF 277 D LRR L KVP TT+ GA A AIK++K ++E+ LQ YF Sbjct: 1115 DSKSLRRATLMQKVPYYTTMAGAEAAALAIKALKAGNLEVRPLQSYF 1161
>CARB_AGRT5 (Q8UDE9) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1162 Score = 42.4 bits (98), Expect = 4e-04 Identities = 22/47 (46%), Positives = 28/47 (59%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSIEILALQDYF 277 D LRR L KVP TT+ GA A AIK++K ++E+ LQ YF Sbjct: 1115 DSKSLRRATLMQKVPYYTTMAGAEAAALAIKALKAGNLEVKPLQSYF 1161
>CARB_METMA (P58944) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1073 Score = 41.2 bits (95), Expect = 0.001 Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSM-KNKSIEILALQDY 280 DG ++RR A+ +KVP ITT+ A A DAI++M K + + I ++ +Y Sbjct: 1018 DGYRIRRAAVDFKVPYITTIQAAVAAADAIETMKKGQDLTIKSINEY 1064
>CARB_METTH (O27077) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1060 Score = 40.8 bits (94), Expect = 0.001 Identities = 17/46 (36%), Positives = 32/46 (69%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSIEILALQDY 280 DG +RR+A+ +P +TT+ GARA ++AI++++ I + +L +Y Sbjct: 1012 DGYLIRRMAVELGIPYVTTLAGARAALNAIEAVRMGKITVKSLDEY 1057
>CARB_THETN (Q8RBK0) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1072 Score = 40.0 bits (92), Expect = 0.002 Identities = 13/45 (28%), Positives = 30/45 (66%) Frame = -1 Query: 414 GLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSIEILALQDY 280 G +LRR A+ Y++P+ T++D +A ++A+ + + +L++ +Y Sbjct: 1015 GFKLRRTAVEYRIPLFTSIDTIKAALNAVSKVNVNGLSVLSMNEY 1059
>CARB_METAC (Q8TNY4) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1070 Score = 38.5 bits (88), Expect = 0.006 Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSM-KNKSIEILALQDY 280 DG ++RR A+ +KVP ITT+ A A AI++M K + + I ++ +Y Sbjct: 1018 DGSRIRRAAVDFKVPYITTIQAASAAAAAIETMKKGEDLTIKSINEY 1064
>CARB_LEPIN (Q8F832) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1106 Score = 38.1 bits (87), Expect = 0.008 Identities = 17/45 (37%), Positives = 28/45 (62%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSIEILALQD 283 D +R+ A+ +KVP +TT + A+A + + MKNK I +LQ+ Sbjct: 1054 DSFTIRQAAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTIHSLQE 1098
>CARB_LEPIC (Q72NF1) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1106 Score = 38.1 bits (87), Expect = 0.008 Identities = 17/45 (37%), Positives = 28/45 (62%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSIEILALQD 283 D +R+ A+ +KVP +TT + A+A + + MKNK I +LQ+ Sbjct: 1054 DSFTIRQAAIRFKVPCLTTSNAAKALIKGMVEMKNKGFTIHSLQE 1098
>CARB_ARCFU (O28994) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1076 Score = 38.1 bits (87), Expect = 0.008 Identities = 17/46 (36%), Positives = 32/46 (69%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSIEILALQDY 280 +G +RR A+ Y V ITT+ GA A + AI+++K++ + + ++Q+Y Sbjct: 1027 EGYMIRRAAVDYGVAHITTLAGAMAAVRAIEAVKSRKMVVKSIQEY 1072
>CARB2_METJA (Q58776) Carbamoyl-phosphate synthase large chain, C-terminal| section (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain) Length = 618 Score = 38.1 bits (87), Expect = 0.008 Identities = 16/45 (35%), Positives = 29/45 (64%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSIEILALQD 283 DG +RR A+ +P ITT+ GA+A + AI+++K + + +L + Sbjct: 565 DGYYIRRAAVDLGIPYITTIPGAKAAVKAIEAVKTGELSVYSLDE 609
>CARB_CORGL (P58939) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1113 Score = 37.0 bits (84), Expect = 0.018 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSIEILALQD 283 DG +R A+ VP+ITTV G A + I++++ + + ALQ+ Sbjct: 1062 DGYDIRAAAVTVGVPLITTVQGVTAAVQGIEALREGVVSVRALQE 1106
>CARB_METBA (P13258) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) (Fragment) Length = 398 Score = 37.0 bits (84), Expect = 0.018 Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSM-KNKSIEILALQDY 280 DG ++RR A+ +KVP ITT+ A A AI++M K + + I ++ +Y Sbjct: 342 DGSRIRRAAVDFKVPYITTMQAAIAAAAAIETMKKGEELTIKSINEY 388
>CARB_CAUCR (Q9A4D6) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1099 Score = 35.8 bits (81), Expect = 0.041 Identities = 18/46 (39%), Positives = 25/46 (54%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSIEILALQDY 280 D ++RR AL KVP TT GA A AI +++++ LQ Y Sbjct: 1051 DSFEIRRTALMMKVPYYTTSAGALAAAQAIAGAPAEALDVRPLQSY 1096
>CARB_CLOAB (Q97FT3) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1065 Score = 35.4 bits (80), Expect = 0.054 Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Frame = -1 Query: 414 GLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKS-IEILALQDYF 277 G +RR A YKV T +D A+A + AIK + ++ +E A+++YF Sbjct: 1018 GFSIRRKAAEYKVGAFTCIDTAKAFLTAIKVKREEAKVEYRAMKEYF 1064
>CARB_THEMA (Q9WZ27) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1099 Score = 35.4 bits (80), Expect = 0.054 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = -1 Query: 414 GLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSI 304 G +R AL K+P +TTV+ RA + AI+ MK SI Sbjct: 1051 GYMIRTTALKRKIPYLTTVESLRAAVAAIRKMKKGSI 1087
>CARB_RALSO (Q8XZ83) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1081 Score = 32.0 bits (71), Expect = 0.59 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSI 304 D +R ALA +V TT+ GARA ++ +K ++N + Sbjct: 1034 DSRSIRTAALANRVTYYTTIAGARAAVEGLKHLQNLDV 1071
>CARB_BACCL (P46537) Carbamoyl-phosphate synthase pyrimidine-specific large chain| (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain) Length = 1065 Score = 31.6 bits (70), Expect = 0.78 Identities = 13/33 (39%), Positives = 23/33 (69%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSM 319 DG ++RR A+ +P +T++D ARA + ++SM Sbjct: 1019 DGFRIRREAVENGIPCLTSLDTARAMLQVLESM 1051
>CARB2_AQUAE (O67233) Carbamoyl-phosphate synthase large chain, C-terminal| section (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain) Length = 537 Score = 31.6 bits (70), Expect = 0.78 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 5/52 (9%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSMK-----NKSIEILALQDYF 277 D +RR + + VP TT+ A ++AIKS+K K + + +LQ+ + Sbjct: 484 DAYYIRRACVQFNVPYYTTMRAGYAVLEAIKSIKKLKEEGKGLSVHSLQEIY 535
>PYR1_DICDI (P20054) Protein PYR1-3 [Includes: Glutamine-dependent| carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)] Length = 2185 Score = 31.6 bits (70), Expect = 0.78 Identities = 13/33 (39%), Positives = 23/33 (69%) Frame = -1 Query: 414 GLQLRRLALAYKVPIITTVDGARATMDAIKSMK 316 G LRR+A+ ++VP+IT + A+ +D++ MK Sbjct: 1381 GYSLRRVAIDFQVPLITNIKCAKLFVDSLSYMK 1413
>CARB_STAHJ (Q4L5Q5) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1057 Score = 30.8 bits (68), Expect = 1.3 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSM 319 DG Q+RR + VP +T++D A A + I+SM Sbjct: 1018 DGFQIRRTTVENGVPCLTSLDTANALTNVIESM 1050
>CARB_BUCAI (P57244) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1078 Score = 30.8 bits (68), Expect = 1.3 Identities = 19/41 (46%), Positives = 24/41 (58%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSIEIL 295 D + R AL YKV TTV+GA AT+ A+ K+IE L Sbjct: 1024 DSKLICRSALQYKVHYDTTVNGAFATVMALNENPIKNIETL 1064
>PYR1_SCHPO (Q09794) Protein ura1 [Includes: Glutamine-dependent| carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2)] Length = 2244 Score = 30.8 bits (68), Expect = 1.3 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = -1 Query: 414 GLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSIEILALQDYF 277 G + RRLA+ Y VP++T V A+ ++AI + S+ + Q F Sbjct: 1489 GYKSRRLAIDYSVPLVTNVKCAKLMIEAICRNLDFSLSTVDFQSSF 1534
>CARB_STRR6 (Q8CWR0) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1058 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKS 322 DG Q+RR A+ + VP+ T +D A A + ++S Sbjct: 1019 DGEQIRRSAIEHGVPLFTALDTANAMLKVLES 1050
>CARB_STRPN (Q97QE4) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1058 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKS 322 DG Q+RR A+ + VP+ T +D A A + ++S Sbjct: 1019 DGEQIRRSAIEHGVPLFTALDTANAMLKVLES 1050
>CARB_STAES (Q8CPJ4) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1057 Score = 30.4 bits (67), Expect = 1.7 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSM 319 DG Q+RR + VP +T++D A A + I+SM Sbjct: 1018 DGFQIRRTTVENGVPCLTSLDTASALTNVIESM 1050
>CARB_STAEQ (Q5HPY8) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1057 Score = 30.4 bits (67), Expect = 1.7 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSM 319 DG Q+RR + VP +T++D A A + I+SM Sbjct: 1018 DGFQIRRTTVENGVPCLTSLDTASALTNVIESM 1050
>CARB_STAAW (P58940) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1057 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSM 319 DG Q+RR + +P +T++D A A + I+SM Sbjct: 1018 DGFQIRRTTVENGIPCLTSLDTANALTNVIESM 1050
>CARB_STAAS (Q6GA10) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1057 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSM 319 DG Q+RR + +P +T++D A A + I+SM Sbjct: 1018 DGFQIRRTTVENGIPCLTSLDTANALTNVIESM 1050
>CARB_STAAR (Q6GHN2) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1057 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSM 319 DG Q+RR + +P +T++D A A + I+SM Sbjct: 1018 DGFQIRRTTVENGIPCLTSLDTANALTNVIESM 1050
>CARB_STAAN (P63740) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1057 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSM 319 DG Q+RR + +P +T++D A A + I+SM Sbjct: 1018 DGFQIRRTTVENGIPCLTSLDTANALTNVIESM 1050
>CARB_STAAM (P63739) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1057 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSM 319 DG Q+RR + +P +T++D A A + I+SM Sbjct: 1018 DGFQIRRTTVENGIPCLTSLDTANALTNVIESM 1050
>CARB_STAAC (Q5HGM9) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1057 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSM 319 DG Q+RR + +P +T++D A A + I+SM Sbjct: 1018 DGFQIRRTTVENGIPCLTSLDTANALTNVIESM 1050
>PYR1_YEAST (P07259) Protein URA1 [Includes: Glutamine-dependent| carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2)] Length = 2214 Score = 29.6 bits (65), Expect = 2.9 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = -1 Query: 414 GLQLRRLALAYKVPIITTVDGARATMDAI 328 G + RRLA+ Y VP++T V A+ ++AI Sbjct: 1457 GYKTRRLAVDYSVPLVTNVKCAKLLIEAI 1485
>NUCM_TRYBB (P21301) NADH-ubiquinone oxidoreductase 49 kDa subunit homolog (EC| 1.6.5.3) (NADH dehydrogenase subunit 7 homolog) Length = 386 Score = 29.6 bits (65), Expect = 2.9 Identities = 20/55 (36%), Positives = 25/55 (45%) Frame = +1 Query: 199 KGEHIKGMTLRGGLCSWQLLWCISRLEIVLQCKNLNGLVLHTLDGVHGSPSTIHG 363 KGE+ + GLCS L C L I L L G +LH L V G+ + G Sbjct: 328 KGEYCLLLCFCVGLCSRLRLRCADFLHICLLDVCLRGFLLHDLVAVLGNIDVVFG 382
>YM43_YEAST (Q03218) Hypothetical 56.2 kDa protein in SIP18-SPT21 intergenic| region Length = 510 Score = 29.6 bits (65), Expect = 2.9 Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 13/90 (14%) Frame = +3 Query: 48 NPQHQFLTP-------------NTQQPNVVSTLAVGDYRSSR*AKSHMAQDCSSYTRIKT 188 NPQ+Q L T+Q +++S + DY+SS+ ++ + ++ + Sbjct: 75 NPQYQKLAEAFNSHDHVHLRESETEQNDIISLGTIRDYKSSKCEQADKPSSLNLHSHTHS 134 Query: 189 LHGKGRAHKGYDPKGRLVQLATSVVHQQAG 278 HG +H ++P L+ L+T + + AG Sbjct: 135 -HGHTHSHAAHNP---LLVLSTEQIRKNAG 160
>FSHR_FELCA (Q5GJ04) Follicle-stimulating hormone receptor precursor (FSH-R)| (Follitropin receptor) Length = 695 Score = 29.3 bits (64), Expect = 3.8 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Frame = -1 Query: 207 LSLFHVMSLF*YMNYNLAPCGILLICCCDSHL-LPVSKPHLVAGCLESKI 61 LS +VMSL L ++ICCC +H+ L V P++V+ ++KI Sbjct: 526 LSQLYVMSLL-----VLNVLAFVVICCCYAHIYLTVRNPNIVSSSSDTKI 570
>PYR1_EMENI (O93937) Protein pyrABCN [Includes: Glutamine-dependent| carbamoyl-phosphate (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2)] Length = 2275 Score = 28.9 bits (63), Expect = 5.0 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = -1 Query: 414 GLQLRRLALAYKVPIITTVDGARATMDAI 328 G + RR+A+ Y+ P++T V A+ ++AI Sbjct: 1497 GYRTRRMAVDYQTPLVTNVKNAKILIEAI 1525
>CARB_PSEAE (P38100) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1072 Score = 28.9 bits (63), Expect = 5.0 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSMKNKSIEIL 295 D +RR AL +K+ TT+ G +A +A+K K++ L Sbjct: 1023 DSYSIRRNALQHKICCTTTIAGGQAICEALKFGPEKTVRRL 1063
>PAFA_CAEEL (Q22943) Platelet-activating factor acetylhydrolase homolog 2 (EC| 3.1.1.47) Length = 388 Score = 28.5 bits (62), Expect = 6.6 Identities = 13/54 (24%), Positives = 27/54 (50%) Frame = +3 Query: 60 QFLTPNTQQPNVVSTLAVGDYRSSR*AKSHMAQDCSSYTRIKTLHGKGRAHKGY 221 ++L ++Q+ NV+++ VG+ R + M+ C + + HG G + Y Sbjct: 71 EYLGQSSQKMNVITSTVVGEKREDCIENAQMSTKCDKWPIVVFSHGLGGSRTFY 124
>CARB_HALER (Q8RSS3) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1076 Score = 28.5 bits (62), Expect = 6.6 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIK 325 D +RR ALA KVP TT+ GA A A++ Sbjct: 1027 DSSVIRRTALARKVPYATTLAGANAVCLALE 1057
>COFE_HALMA (Q5UZQ7) F420-0:gamma-glutamyl ligase (EC 6.3.2.-)| Length = 257 Score = 28.5 bits (62), Expect = 6.6 Identities = 10/33 (30%), Positives = 20/33 (60%) Frame = +3 Query: 162 CSSYTRIKTLHGKGRAHKGYDPKGRLVQLATSV 260 C + T + +G+GR+ Y+P GR ++A ++ Sbjct: 35 CVASTIVSKANGRGRSLSSYEPSGRAERIAATI 67
>CARB_FUSNN (Q8RG86) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1058 Score = 28.5 bits (62), Expect = 6.6 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -1 Query: 417 DGLQLRRLALAYKVPIITTVDGARATMDAIKSM 319 DG ++RR A Y V T++D A A + I+SM Sbjct: 1019 DGFRIRRKATEYGVICFTSLDTANALLRVIESM 1051
>SYY_MIMIV (Q5UPJ7) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 346 Score = 28.5 bits (62), Expect = 6.6 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 3/33 (9%) Frame = +3 Query: 150 MAQDCSSYTRIKTLHGKGR---AHKGYDPKGRL 239 +A++C + R+K L GR A+ G++P GR+ Sbjct: 19 IAEECETLDRLKQLVDSGRIFTAYNGFEPSGRI 51
>Y4XM_RHISN (P55705) Hypothetical transport protein y4xM| Length = 404 Score = 28.1 bits (61), Expect = 8.6 Identities = 21/55 (38%), Positives = 24/55 (43%) Frame = -3 Query: 361 RGWCSGYHGRHQEYEEQVH*DSCIARLFPAC*CTTEVASCTSRPLGSYPLCALPF 197 +G C+GY Q Y +V ARLF T V S LG L ALPF Sbjct: 115 QGACAGYIAPAQAYGVEVTGGRDRARLFAWLQVATNVGSLGGAFLGGLILDALPF 169 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,305,541 Number of Sequences: 219361 Number of extensions: 1390943 Number of successful extensions: 3440 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 3296 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3440 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
