>ref|NM_185567.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3522

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                        
Query: 336  ctatcggaagtaaatggagataagaggaatatcgatgtcgtttccgtcgtcatcctcgca 395
            ||||||||||||||  |||| |||||||||||||||||||||||| || |||||||||||
Sbjct: 3360 ctatcggaagtaaactgagacaagaggaatatcgatgtcgtttccatcatcatcctcgca 3301

                                           
Query: 396  agccacaacaacatcaaagtgcttcctgtat 426
             ||| | |||| ||| || ||||||||||||
Sbjct: 3300 ggccgccacaagatccaaatgcttcctgtat 3270

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                            
Query: 336      ctatcggaagtaaatggagataagaggaatatcgatgtcgtttccgtcgtcatcctcgca 395
                ||||||||||||||  |||| |||||||||||||||||||||||| || |||||||||||
Sbjct: 29429859 ctatcggaagtaaactgagacaagaggaatatcgatgtcgtttccatcatcatcctcgca 29429800

                                               
Query: 396      agccacaacaacatcaaagtgcttcctgtat 426
                 ||| | |||| ||| || ||||||||||||
Sbjct: 29429799 ggccgccacaagatccaaatgcttcctgtat 29429769

>dbj|AK074007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076H04, full
            insert sequence
          Length = 3522

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                        
Query: 336  ctatcggaagtaaatggagataagaggaatatcgatgtcgtttccgtcgtcatcctcgca 395
            ||||||||||||||  |||| |||||||||||||||||||||||| || |||||||||||
Sbjct: 3360 ctatcggaagtaaactgagacaagaggaatatcgatgtcgtttccatcatcatcctcgca 3301

                                           
Query: 396  agccacaacaacatcaaagtgcttcctgtat 426
             ||| | |||| ||| || ||||||||||||
Sbjct: 3300 ggccgccacaagatccaaatgcttcctgtat 3270

>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0034A04
          Length = 151263

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                         
Query: 336   ctatcggaagtaaatggagataagaggaatatcgatgtcgtttccgtcgtcatcctcgca 395
             ||||||||||||||  |||| |||||||||||||||||||||||| || |||||||||||
Sbjct: 92781 ctatcggaagtaaactgagacaagaggaatatcgatgtcgtttccatcatcatcctcgca 92722

                                            
Query: 396   agccacaacaacatcaaagtgcttcctgtat 426
              ||| | |||| ||| || ||||||||||||
Sbjct: 92721 ggccgccacaagatccaaatgcttcctgtat 92691

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 81/100 (81%)
 Strand = Plus / Plus

                                                                            
Query: 335      cctatcggaagtaaatggagataagaggaatatcgatgtcgtttccgtcgtcatcctcgc 394
                |||| ||||||||||||||||| ||||| || |||| ||| || || || ||||| || |
Sbjct: 10271238 cctaccggaagtaaatggagatgagagggatgtcgacgtcattcccatcatcatcttcac 10271297

                                                        
Query: 395      aagccacaacaacatcaaagtgcttcctgtatgctggaac 434
                | || || || ||||| | |||| |||||||||| |||||
Sbjct: 10271298 aggcaacgacgacatccaggtgcctcctgtatgccggaac 10271337



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 116      gcatcgcacaccttcaaatagttggcatgcaaca 149
                |||| |||||||| |||||||| |||||||||||
Sbjct: 10271037 gcattgcacacctgcaaatagtcggcatgcaaca 10271070

>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0045E22, from chromosome 3, complete sequence
          Length = 160920

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 81/100 (81%)
 Strand = Plus / Plus

                                                                          
Query: 335    cctatcggaagtaaatggagataagaggaatatcgatgtcgtttccgtcgtcatcctcgc 394
              |||| ||||||||||||||||| ||||| || |||| ||| || || || ||||| || |
Sbjct: 132651 cctaccggaagtaaatggagatgagagggatgtcgacgtcattcccatcatcatcttcac 132710

                                                      
Query: 395    aagccacaacaacatcaaagtgcttcctgtatgctggaac 434
              | || || || ||||| | |||| |||||||||| |||||
Sbjct: 132711 aggcaacgacgacatccaggtgcctcctgtatgccggaac 132750



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 116    gcatcgcacaccttcaaatagttggcatgcaaca 149
              |||| |||||||| |||||||| |||||||||||
Sbjct: 132450 gcattgcacacctgcaaatagtcggcatgcaaca 132483

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 81/100 (81%)
 Strand = Plus / Plus

                                                                            
Query: 335      cctatcggaagtaaatggagataagaggaatatcgatgtcgtttccgtcgtcatcctcgc 394
                |||| ||||||||||||||||| ||||| || |||| ||| || || || ||||| || |
Sbjct: 10269339 cctaccggaagtaaatggagatgagagggatgtcgacgtcattcccatcatcatcttcac 10269398

                                                        
Query: 395      aagccacaacaacatcaaagtgcttcctgtatgctggaac 434
                | || || || ||||| | |||| |||||||||| |||||
Sbjct: 10269399 aggcaacgacgacatccaggtgcctcctgtatgccggaac 10269438



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 116      gcatcgcacaccttcaaatagttggcatgcaaca 149
                |||| |||||||| |||||||| |||||||||||
Sbjct: 10269138 gcattgcacacctgcaaatagtcggcatgcaaca 10269171

>dbj|AK120544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129J22, full
            insert sequence
          Length = 3682

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 81/100 (81%)
 Strand = Plus / Minus

                                                                        
Query: 335  cctatcggaagtaaatggagataagaggaatatcgatgtcgtttccgtcgtcatcctcgc 394
            |||| ||||||||||||||||| ||||| || |||| ||| || || || ||||| || |
Sbjct: 3400 cctaccggaagtaaatggagatgagagggatgtcgacgtcattcccatcatcatcttcac 3341

                                                    
Query: 395  aagccacaacaacatcaaagtgcttcctgtatgctggaac 434
            | || || || ||||| | |||| |||||||||| |||||
Sbjct: 3340 aggcaacgacgacatccaggtgcctcctgtatgccggaac 3301



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 116  gcatcgcacaccttcaaatagttggcatgcaaca 149
            |||| |||||||| |||||||| |||||||||||
Sbjct: 3601 gcattgcacacctgcaaatagtcggcatgcaaca 3568

>emb|AL672016.11| Zebrafish DNA sequence from clone BUSM1-63M10 in linkage group 1
             Contains three novel genes for MHC class I antigens, a
             novel gene similar to human C21orf18 (chromosome 21 open
             reading frame 18) and a novel gene similar to human CRYZL1
             (crystallin, zeta (quinone reductase)-like 1), complete
             sequence
          Length = 84081

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 117   catcgcacaccttcaaatagttg 139
             |||||||||||||||||||||||
Sbjct: 53673 catcgcacaccttcaaatagttg 53695

>emb|BX005416.7| Zebrafish DNA sequence from clone CH211-287J19 in linkage group 20,
             complete sequence
          Length = 163197

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 117   catcgcacaccttcaaatagttg 139
             |||||||||||||||||||||||
Sbjct: 90434 catcgcacaccttcaaatagttg 90412

>gb|AF027986.2| Macropus agilis tRNA-Phe gene, partial sequence; 12S ribosomal RNA,
            complete sequence; tRNA-Val gene, complete sequence; and
            16S ribosomal RNA, complete sequence; mitochondrial genes
            for mitochondrial products
          Length = 2629

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 25   aatcccaaaaatatcatcaaa 45
            |||||||||||||||||||||
Sbjct: 1617 aatcccaaaaatatcatcaaa 1637

>emb|AJ299395.1|CAR299395 Cicer arietinum partial mRNA for ubiquitin activating enzyme E1
           (ORF), clone CanUBC-1
          Length = 807

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 382 tcgtcatcctcgcaagccacaacaacatc 410
           |||||||||||||| ||||| ||||||||
Sbjct: 478 tcgtcatcctcgcaggccacgacaacatc 450

>emb|CT030158.4| M.truncatula DNA sequence from clone MTH2-49E10 on chromosome 3,
             complete sequence
          Length = 122591

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    cccaaaaatatcatcaaacaa 48
             |||||||||||||||||||||
Sbjct: 31625 cccaaaaatatcatcaaacaa 31645

>dbj|AP006372.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT36C05, TM0215b,
             complete sequence
          Length = 84914

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    cccaaaaatatcatcaaacaa 48
             |||||||||||||||||||||
Sbjct: 56320 cccaaaaatatcatcaaacaa 56340

>gb|AC107838.16| Mus musculus chromosome 1, clone RP23-274N9, complete sequence
          Length = 160232

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    aagcaatcccaaaaatatca 40
             ||||||||||||||||||||
Sbjct: 32339 aagcaatcccaaaaatatca 32358

>gb|BT019260.1| Zea mays clone Contig933.F mRNA sequence
          Length = 771

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 336 ctatcggaagtaaatggagataagaggaatatcgatgtcgtttccgtcgtcatcctcgca 395
           |||||||||||| |  ||||  |||||||| || ||||| || || ||||||||||||||
Sbjct: 210 ctatcggaagtacaccgagactagaggaatgtcaatgtcattcccatcgtcatcctcgca 269

>gb|BT018436.1| Zea mays clone EL01N0372B11.d mRNA sequence
          Length = 1726

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                        
Query: 336  ctatcggaagtaaatggagataagaggaatatcgatgtcgtttccgtcgtcatcctcgca 395
            |||||||||||| |  ||||  |||||||| || ||||| || || ||||||||||||||
Sbjct: 1560 ctatcggaagtacaccgagactagaggaatgtcaatgtcattcccatcgtcatcctcgca 1501

>ref|XM_957892.1| Neurospora crassa OR74A hypothetical protein (NCU07605.1) partial
           mRNA
          Length = 3849

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 370 atgtcgtttccgtcgtcatc 389
           ||||||||||||||||||||
Sbjct: 506 atgtcgtttccgtcgtcatc 487

>ref|XM_328310.1| Neurospora crassa OR74A hypothetical protein (NCU07605.1) partial
           mRNA
          Length = 3849

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 370 atgtcgtttccgtcgtcatc 389
           ||||||||||||||||||||
Sbjct: 506 atgtcgtttccgtcgtcatc 487

>gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 6
              through 10 and partial cds
          Length = 688489

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     atcccaaaaatatcatcaaa 45
              ||||||||||||||||||||
Sbjct: 230919 atcccaaaaatatcatcaaa 230900

>emb|Z70204.1|CEC11G6 Caenorhabditis elegans Cosmid C11G6, complete sequence
          Length = 40302

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    aagcaatcccaaaaatatca 40
             ||||||||||||||||||||
Sbjct: 33094 aagcaatcccaaaaatatca 33075

>gb|AF125443.1| Caenorhabditis elegans fosmid H32C10, complete sequence
          Length = 34869

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    caaaaatatcatcaaacaat 49
             ||||||||||||||||||||
Sbjct: 10010 caaaaatatcatcaaacaat 10029

>gb|AC146748.16| Medicago truncatula clone mth2-65k8, complete sequence
          Length = 113744

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    ccaaaaatatcatcaaacaa 48
             ||||||||||||||||||||
Sbjct: 99201 ccaaaaatatcatcaaacaa 99220

>gb|AC026123.24| Homo sapiens 16 BAC RP11-174D5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 170088

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    caaacaatcccaaaatatca 61
             ||||||||||||||||||||
Sbjct: 50234 caaacaatcccaaaatatca 50215

>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA,
              complete genome
          Length = 2516575

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 21     aagcaatcccaaaaatatcatcaaacaa 48
              ||||||| ||||||||||||||| ||||
Sbjct: 378332 aagcaataccaaaaatatcatcatacaa 378359

>gb|AC084058.6| Homo sapiens chromosome 16 clone CTD-2119F7, complete sequence
          Length = 160487

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     caaacaatcccaaaatatca 61
              ||||||||||||||||||||
Sbjct: 100526 caaacaatcccaaaatatca 100507

>emb|AL844571.8| Mouse DNA sequence from clone RP23-224C23 on chromosome 2, complete
             sequence
          Length = 182273

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   gttttggaatgtttcaaaca 272
             ||||||||||||||||||||
Sbjct: 12319 gttttggaatgtttcaaaca 12300


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,164,089
Number of Sequences: 3902068
Number of extensions: 4164089
Number of successful extensions: 76573
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76416
Number of HSP's gapped (non-prelim): 157
length of query: 434
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 412
effective length of database: 17,147,199,772
effective search space: 7064646306064
effective search space used: 7064646306064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)