Clone Name | rbastl29e09 |
---|---|
Clone Library Name | barley_pub |
>SOTB_SHIFL (Q7UCG7) Probable sugar efflux transporter| Length = 396 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = +2 Query: 86 THNRISRRATVARLMTIELAAALFNTTKQV 175 T N +SR+ R++T+ +AA +FNTT+ V Sbjct: 2 TTNTVSRKVAWLRVVTLAVAAFIFNTTEFV 31
>SOTB_ECOLI (P31122) Sugar efflux transporter| Length = 396 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = +2 Query: 86 THNRISRRATVARLMTIELAAALFNTTKQV 175 T N +SR+ R++T+ +AA +FNTT+ V Sbjct: 2 TTNTVSRKVAWLRVVTLAVAAFIFNTTEFV 31
>SOTB_ECOL6 (Q8FHE6) Probable sugar efflux transporter| Length = 396 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = +2 Query: 86 THNRISRRATVARLMTIELAAALFNTTKQV 175 T N +SR+ R++T+ +AA +FNTT+ V Sbjct: 2 TTNTVSRKVAWLRVVTLAVAAFIFNTTEFV 31
>SOTB_ECO57 (P58529) Probable sugar efflux transporter| Length = 396 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = +2 Query: 86 THNRISRRATVARLMTIELAAALFNTTKQV 175 T N +SR+ R++T+ +AA +FNTT+ V Sbjct: 2 TTNTVSRKVAWLRVVTLAVAAFIFNTTEFV 31
>SOTB_SALTY (P58531) Probable sugar efflux transporter| Length = 396 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = +2 Query: 86 THNRISRRATVARLMTIELAAALFNTTKQV 175 T N +SR+ R++T+ +AA +FNTT+ V Sbjct: 2 TINPVSRKVAWLRVVTLAIAAFIFNTTEFV 31
>SOTB_SALTI (P58530) Probable sugar efflux transporter| Length = 396 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = +2 Query: 86 THNRISRRATVARLMTIELAAALFNTTKQV 175 T N +SR+ R++T+ +AA +FNTT+ V Sbjct: 2 TINPVSRKVAWLRVVTLAIAAFIFNTTEFV 31
>ATS12_MOUSE (Q811B3) ADAMTS-12 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 12) (ADAM-TS 12) (ADAM-TS12) Length = 1600 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 2/40 (5%) Frame = -3 Query: 124 SCNCCSSAY--SVVCSKAVPVDCTFVSRL**CRACRLTSC 11 S C AY SV CS V DCT + R + C L C Sbjct: 1331 STTCGLGAYWRSVECSSGVDADCTTIQRPDPAKKCHLRPC 1370
>RORG_HUMAN (P51449) Nuclear receptor ROR-gamma (Nuclear receptor RZR-gamma)| Length = 518 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = -3 Query: 112 CSSAYSVVCSKAVPVDCTFVSRL**CRACRLTSCV 8 C++AYS + P+D T +R C+ CRL C+ Sbjct: 61 CNAAYSCTRQQNCPIDRTSRNR---CQHCRLQKCL 92
>RORG_MOUSE (P51450) Nuclear receptor ROR-gamma (Nuclear receptor RZR-gamma)| (Thymus orphan receptor) (TOR) Length = 516 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/50 (36%), Positives = 23/50 (46%) Frame = -3 Query: 157 E*CCS*LDRHQSCNCCSSAYSVVCSKAVPVDCTFVSRL**CRACRLTSCV 8 E C R Q CN AYS + P+D T +R C+ CRL C+ Sbjct: 49 EGCKGFFRRSQQCNV---AYSCTRQQNCPIDRTSRNR---CQHCRLQKCL 92 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,973,542 Number of Sequences: 219361 Number of extensions: 665055 Number of successful extensions: 2144 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2071 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2144 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)