>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 95/115 (82%)
 Strand = Plus / Minus

                                                                            
Query: 224      tgtagtagacgatcttgatctcggtgacgccgtggcagttgccgccggggacggagtgct 283
                ||||||||| |||||||| ||||  |||| |||||||||||||||||||||||| ||   
Sbjct: 23454201 tgtagtagatgatcttgagctcgtcgacggcgtggcagttgccgccggggacggcgtcgg 23454142

                                                                       
Query: 284      cgaagcagcggttgccgctgttgcatccggcggtggggcagtgcccctgcagcgg 338
                |||||||  ||  ||||| |  ||| ||||||| ||||||||| ||||| |||||
Sbjct: 23454141 cgaagcactggccgccgccgcggcacccggcggcggggcagtggccctggagcgg 23454087

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 95/115 (82%)
 Strand = Plus / Minus

                                                                            
Query: 224      tgtagtagacgatcttgatctcggtgacgccgtggcagttgccgccggggacggagtgct 283
                ||||||||| |||||||| ||||  |||| |||||||||||||||||||||||| ||   
Sbjct: 23382392 tgtagtagatgatcttgagctcgtcgacggcgtggcagttgccgccggggacggcgtcgg 23382333

                                                                       
Query: 284      cgaagcagcggttgccgctgttgcatccggcggtggggcagtgcccctgcagcgg 338
                |||||||  ||  ||||| |  ||| ||||||| ||||||||| ||||| |||||
Sbjct: 23382332 cgaagcactggccgccgccgcggcacccggcggcggggcagtggccctggagcgg 23382278

>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 162261

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 95/115 (82%)
 Strand = Plus / Plus

                                                                         
Query: 224   tgtagtagacgatcttgatctcggtgacgccgtggcagttgccgccggggacggagtgct 283
             ||||||||| |||||||| ||||  |||| |||||||||||||||||||||||| ||   
Sbjct: 47958 tgtagtagatgatcttgagctcgtcgacggcgtggcagttgccgccggggacggcgtcgg 48017

                                                                    
Query: 284   cgaagcagcggttgccgctgttgcatccggcggtggggcagtgcccctgcagcgg 338
             |||||||  ||  ||||| |  ||| ||||||| ||||||||| ||||| |||||
Sbjct: 48018 cgaagcactggccgccgccgcggcacccggcggcggggcagtggccctggagcgg 48072

>dbj|AK107485.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-C08, full
           insert sequence
          Length = 800

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                 
Query: 224 tgtagtagacgatcttgatctcggtgacgccgtggcagttgccgccggggacgg 277
           ||||||||| |||||||| ||||  |||| ||||||||||||||||||||||||
Sbjct: 517 tgtagtagatgatcttgagctcgtcgacggcgtggcagttgccgccggggacgg 464

>gb|AC164304.2| Mus musculus BAC clone RP23-261B24 from chromosome 14, complete
             sequence
          Length = 184690

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 171   aggtgcagcagctagtatagct 192
             ||||||||||||||||||||||
Sbjct: 28803 aggtgcagcagctagtatagct 28782

>gb|BT017415.1| Zea mays clone EL01N0331H10.c mRNA sequence
          Length = 761

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 318 ggggcagtgcccctgcagcgggctcccgtgcggggtgacggagac 362
           ||||||| | |||||||||||    ||||||||||||||||||||
Sbjct: 265 ggggcagcggccctgcagcggcgagccgtgcggggtgacggagac 221

>gb|BT016251.1| Zea mays clone Contig84 mRNA sequence
          Length = 943

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 318 ggggcagtgcccctgcagcgggctcccgtgcggggtgacggagac 362
           ||||||| | |||||||||||    ||||||||||||||||||||
Sbjct: 471 ggggcagcggccctgcagcggcgagccgtgcggggtgacggagac 427

>gb|BC096051.1| Mus musculus suppressor of Ty 3 homolog (S. cerevisiae), mRNA (cDNA
           clone IMAGE:5121973)
          Length = 1215

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 134 atcgagctagctgcagcattattca 158
           |||| ||||||||||||||||||||
Sbjct: 68  atcgggctagctgcagcattattca 44

>ref|NM_178652.1| Mus musculus suppressor of Ty 3 homolog (S. cerevisiae) (Supt3h),
           mRNA
          Length = 1484

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 134 atcgagctagctgcagcattattca 158
           |||| ||||||||||||||||||||
Sbjct: 284 atcgggctagctgcagcattattca 260

>gb|AF514872.1| Paranotothenia microlepidota antifreeze glycoprotein polyprotein
           precursor (AFGP) gene, partial cds
          Length = 826

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 288 gcagcggttgccgctgttgca 308
           |||||||||||||||||||||
Sbjct: 643 gcagcggttgccgctgttgca 623

>emb|AL391832.10| Human DNA sequence from clone RP11-443B7 on chromosome 1 Contains two
            novel genes (LOC284527), complete sequence
          Length = 144648

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 87   cacacaacagaataagcagac 107
            |||||||||||||||||||||
Sbjct: 6694 cacacaacagaataagcagac 6714

>dbj|AK087935.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430001D11
           product:similar to SPT3-LIKE PROTEIN [Homo sapiens],
           full insert sequence
          Length = 1322

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 134 atcgagctagctgcagcattattca 158
           |||| ||||||||||||||||||||
Sbjct: 129 atcgggctagctgcagcattattca 105

>dbj|AK050321.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length
           enriched library, clone:C730037C19 product:similar to
           TRANSCRIPTION FACTOR SUPT3H [Homo sapiens], full insert
           sequence
          Length = 1331

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 134 atcgagctagctgcagcattattca 158
           |||| ||||||||||||||||||||
Sbjct: 131 atcgggctagctgcagcattattca 107

>dbj|AK075916.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2310066G22 product:similar to
           TRANSCRIPTION FACTOR SUPT3H [Homo sapiens], full insert
           sequence
          Length = 1484

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 134 atcgagctagctgcagcattattca 158
           |||| ||||||||||||||||||||
Sbjct: 284 atcgggctagctgcagcattattca 260

>dbj|AK089837.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830031F15 product:suppressor of Ty 3
           homolog (S. cerevisiae), full insert sequence
          Length = 2900

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 134 atcgagctagctgcagcattattca 158
           |||| ||||||||||||||||||||
Sbjct: 131 atcgggctagctgcagcattattca 107

>gb|AF253502.1|AF253502 Gymnodraco acuticeps antifreeze glycoprotein mRNA, partial cds
          Length = 222

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 288 gcagcggttgccgctgttgca 308
           |||||||||||||||||||||
Sbjct: 152 gcagcggttgccgctgttgca 132

>gb|AY104505.1| Zea mays PCO140706 mRNA sequence
          Length = 933

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 318 ggggcagtgcccctgcagcgggctcccgtgcggggtgacggagac 362
           ||||||| | |||||||||||    ||||||||||||||||||||
Sbjct: 469 ggggcagcggccctgcagcggcgagccgtgcggggtgacggagac 425

>emb|AL672242.12| Mouse DNA sequence from clone RP23-83P17 on chromosome 17, complete
             sequence
          Length = 222709

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 134   atcgagctagctgcagcattattca 158
             |||| ||||||||||||||||||||
Sbjct: 50721 atcgggctagctgcagcattattca 50745

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 245    cggtgacgccgtggcagttgccgc 268
              ||||||||||||||||| ||||||
Sbjct: 624253 cggtgacgccgtggcaggtgccgc 624230

>ref|XM_520305.1| PREDICTED: Pan troglodytes similar to Carnitine acetyltransferase
            (LOC464783), mRNA
          Length = 2234

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 283  tcgaagcagcggttgccgctgttg 306
            ||||| ||||||||||||||||||
Sbjct: 1190 tcgaaccagcggttgccgctgttg 1167

>ref|NM_000755.2| Homo sapiens carnitine acetyltransferase (CRAT), transcript variant
            1, mRNA
          Length = 2804

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 283  tcgaagcagcggttgccgctgttg 306
            ||||| ||||||||||||||||||
Sbjct: 1266 tcgaaccagcggttgccgctgttg 1243

>ref|NM_004003.2| Homo sapiens carnitine acetyltransferase (CRAT), transcript variant
            2, mRNA
          Length = 2600

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 283  tcgaagcagcggttgccgctgttg 306
            ||||| ||||||||||||||||||
Sbjct: 1062 tcgaaccagcggttgccgctgttg 1039

>ref|XM_880170.1| PREDICTED: Bos taurus similar to carnitine acetyltransferase isoform
            1 precursor, transcript variant 4 (LOC512902), mRNA
          Length = 2475

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 283  tcgaagcagcggttgccgctgttg 306
            ||||| ||||||||||||||||||
Sbjct: 1045 tcgaaccagcggttgccgctgttg 1022

>ref|XM_880144.1| PREDICTED: Bos taurus similar to carnitine acetyltransferase isoform
            1 precursor, transcript variant 3 (LOC512902), mRNA
          Length = 2541

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 283  tcgaagcagcggttgccgctgttg 306
            ||||| ||||||||||||||||||
Sbjct: 1093 tcgaaccagcggttgccgctgttg 1070

>ref|XM_590507.2| PREDICTED: Bos taurus similar to carnitine acetyltransferase isoform
            1 precursor, transcript variant 1 (LOC512902), mRNA
          Length = 2472

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 283  tcgaagcagcggttgccgctgttg 306
            ||||| ||||||||||||||||||
Sbjct: 1045 tcgaaccagcggttgccgctgttg 1022

>gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0585E02,
             complete sequence
          Length = 138677

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 348   cggggtgacggagacgcgga 367
             ||||||||||||||||||||
Sbjct: 32150 cggggtgacggagacgcgga 32169

>gb|AC145476.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1023E01,
             complete sequence
          Length = 140322

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 348   cggggtgacggagacgcgga 367
             ||||||||||||||||||||
Sbjct: 58923 cggggtgacggagacgcgga 58942

>emb|AL354984.17| Human DNA sequence from clone RP13-379L11 on chromosome 20 Contains a
             putative novel gene, ESTs, STSs and GSSs, complete
             sequence
          Length = 207694

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   gatggatggatccatctatg 220
             ||||||||||||||||||||
Sbjct: 43929 gatggatggatccatctatg 43948

>emb|AL158151.16| Human DNA sequence from clone RP11-247A12 on chromosome 9 Contains
            the CRAT gene for carnitine acetyltransferase (CAT1), the
            PPP2R4 gene for protein phosphatase 2A, regulatory
            subunit B' (PR 53) (PTPA), the IER5L gene for immediate
            early response 5-like, a novel gene and three CpG
            islands, complete sequence
          Length = 162445

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 283  tcgaagcagcggttgccgctgttg 306
            ||||| ||||||||||||||||||
Sbjct: 8005 tcgaaccagcggttgccgctgttg 8028

>emb|CR596033.1| full-length cDNA clone CS0DM007YH06 of Fetal liver of Homo sapiens
            (human)
          Length = 2687

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 283  tcgaagcagcggttgccgctgttg 306
            ||||| ||||||||||||||||||
Sbjct: 1215 tcgaaccagcggttgccgctgttg 1192

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 348      cggggtgacggagacgcgga 367
                ||||||||||||||||||||
Sbjct: 13603015 cggggtgacggagacgcgga 13603034

>ref|XM_396142.2| PREDICTED: Apis mellifera similar to CG11877-PA (LOC412687), partial
            mRNA
          Length = 1378

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  gtgcagcagctagtatagct 192
            ||||||||||||||||||||
Sbjct: 1346 gtgcagcagctagtatagct 1365

>gb|AC161476.3| Pan troglodytes BAC clone CH251-284F7 from chromosome unknown, complete
             sequence
          Length = 153003

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 283   tcgaagcagcggttgccgctgttg 306
             ||||| ||||||||||||||||||
Sbjct: 18524 tcgaaccagcggttgccgctgttg 18501

>gb|AC098872.5| Homo sapiens BAC clone RP11-773P9 from 2, complete sequence
          Length = 178804

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    gttgcaagactgatgacgat 135
              ||||||||||||||||||||
Sbjct: 111789 gttgcaagactgatgacgat 111808

>dbj|AK064795.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C19, full
           insert sequence
          Length = 3008

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 348 cggggtgacggagacgcgga 367
           ||||||||||||||||||||
Sbjct: 948 cggggtgacggagacgcgga 967

>dbj|AK060791.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E01, full
           insert sequence
          Length = 2282

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 348 cggggtgacggagacgcgga 367
           ||||||||||||||||||||
Sbjct: 249 cggggtgacggagacgcgga 268


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,559,823
Number of Sequences: 3902068
Number of extensions: 2559823
Number of successful extensions: 48236
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48101
Number of HSP's gapped (non-prelim): 135
length of query: 393
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 371
effective length of database: 17,147,199,772
effective search space: 6361611115412
effective search space used: 6361611115412
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)