Clone Name | rbastl29e06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | DBP4_YARLI (Q6CGD1) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-) | 28 | 6.0 |
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>DBP4_YARLI (Q6CGD1) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 740 Score = 28.1 bits (61), Expect = 6.0 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +3 Query: 150 LQVTTTEEPARIKSFTAIHVDMACQVNLPNNQLDVSPRKKNA 275 L +T TEEPA I+ A H+ P N+L + P KK + Sbjct: 387 LFLTPTEEPAMIQRLEAKHI--------PINKLTIRPNKKKS 420 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,547,548 Number of Sequences: 219361 Number of extensions: 640706 Number of successful extensions: 1880 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1857 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1880 length of database: 80,573,946 effective HSP length: 69 effective length of database: 65,438,037 effective search space used: 1570512888 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)