>ref|NM_195184.1| Oryza sativa (japonica cultivar-group) putative cytosolic tRNA-Ala
            synthetase (OSJNBb0022I16.6), mRNA
          Length = 2085

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                        
Query: 349  cagcttcattgaagctatctgtgtagcaagctccatggcctccttgacccgagaagcatc 408
            ||||||||||||||||||||| ||||||| |||||| || ||||| |   |||| || ||
Sbjct: 2079 cagcttcattgaagctatctgggtagcaacctccatagcttcctttagttgagaggcctc 2020

                                             
Query: 409  acttccctggccctgggcgaggccattcttgcc 441
            | |||||||||||||||| |  |||||||||||
Sbjct: 2019 agttccctggccctgggcaattccattcttgcc 1987

>dbj|AK066368.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059M16, full
            insert sequence
          Length = 3214

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                        
Query: 349  cagcttcattgaagctatctgtgtagcaagctccatggcctccttgacccgagaagcatc 408
            ||||||||||||||||||||| ||||||| |||||| || ||||| |   |||| || ||
Sbjct: 3002 cagcttcattgaagctatctgggtagcaacctccatagcttcctttagttgagaggcctc 2943

                                             
Query: 409  acttccctggccctgggcgaggccattcttgcc 441
            | |||||||||||||||| |  |||||||||||
Sbjct: 2942 agttccctggccctgggcaattccattcttgcc 2910

>gb|AY104750.1| Zea mays PCO077049 mRNA sequence
          Length = 3244

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 89/105 (84%), Gaps = 2/105 (1%)
 Strand = Plus / Minus

                                                                        
Query: 341  aatcagctcagcttcattgaagctat-ctgtgtagcaagctccatggcctccttgacccg 399
            |||||||  |||||||||||||| || |||| | |||||  |||| || ||||||| | |
Sbjct: 3013 aatcagcagagcttcattgaagcaatgctgt-tcgcaagtgccattgcttccttgagctg 2955

                                                         
Query: 400  agaagcatcacttccctggccctgggcgaggccattcttgccgcc 444
            |||||| ||||| |||||||||||||||| ||| |||||||||||
Sbjct: 2954 agaagcgtcactcccctggccctgggcgacgccgttcttgccgcc 2910

>gb|AC091238.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0022I16, complete sequence
          Length = 127068

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 349   cagcttcattgaagctatctgtgtagcaagctccatggcctcctt 393
             ||||||||||||||||||||| ||||||| |||||| || |||||
Sbjct: 56729 cagcttcattgaagctatctgggtagcaacctccatagcttcctt 56685

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                            
Query: 349     cagcttcattgaagctatctgtgtagcaagctccatggcctcctt 393
               ||||||||||||||||||||| ||||||| |||||| || |||||
Sbjct: 5293531 cagcttcattgaagctatctgggtagcaacctccatagcttcctt 5293487

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                            
Query: 349     cagcttcattgaagctatctgtgtagcaagctccatggcctcctt 393
               ||||||||||||||||||||| ||||||| |||||| || |||||
Sbjct: 5294318 cagcttcattgaagctatctgggtagcaacctccatagcttcctt 5294274

>emb|AL669853.5| Mouse DNA sequence from clone RP23-204F22 on chromosome 11 Contains part
              of the Abca13 gene for ATP-binding cassette sub-family A
              (ABC1) member 13, complete sequence
          Length = 205759

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 17     tctttttattaagatatgaatg 38
              ||||||||||||||||||||||
Sbjct: 102395 tctttttattaagatatgaatg 102416

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 18       ctttttattaagatatgaatgg 39
                ||||||||||||||||||||||
Sbjct: 25175700 ctttttattaagatatgaatgg 25175679



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 19       tttttattaagatatgaatg 38
                ||||||||||||||||||||
Sbjct: 28278365 tttttattaagatatgaatg 28278384

>dbj|AP003220.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0035I14
          Length = 117919

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 18    ctttttattaagatatgaatgg 39
             ||||||||||||||||||||||
Sbjct: 41709 ctttttattaagatatgaatgg 41688

>emb|BX001025.23| Zebrafish DNA sequence from clone CH211-240D20, complete sequence
          Length = 179475

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 2      atccatcataacccatctttttatt 26
              ||||||||||| |||||||||||||
Sbjct: 175593 atccatcataatccatctttttatt 175569

>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 374    gcaagctccatggcctccttg 394
              |||||||||||||||||||||
Sbjct: 442005 gcaagctccatggcctccttg 441985

>emb|AL162633.3|CNS01RHY Human chromosome 14 DNA sequence BAC R-210O8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 164550

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 331   agtctcaacaaatcagctcagcttc 355
             ||||||| |||||||||||||||||
Sbjct: 60085 agtctcatcaaatcagctcagcttc 60061

>emb|AL355073.5|CNS05TC7 Human chromosome 14 DNA sequence BAC R-930O11 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175988

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 331    agtctcaacaaatcagctcagcttc 355
              ||||||| |||||||||||||||||
Sbjct: 154766 agtctcatcaaatcagctcagcttc 154790

>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 374   gcaagctccatggcctccttg 394
             |||||||||||||||||||||
Sbjct: 90648 gcaagctccatggcctccttg 90628

>gb|AC122560.8| Mus musculus chromosome 15, clone RP24-93E14, complete sequence
          Length = 174003

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 333    tctcaacaaatcagctcagc 352
              ||||||||||||||||||||
Sbjct: 108976 tctcaacaaatcagctcagc 108995

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 379     ctccatggcctccttgaccc 398
               ||||||||||||||||||||
Sbjct: 2062888 ctccatggcctccttgaccc 2062907

>emb|AL392045.9| Human DNA sequence from clone RP13-408A12 on chromosome 10, complete
             sequence
          Length = 161933

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    aagcagatacaaaatggcca 60
             ||||||||||||||||||||
Sbjct: 55696 aagcagatacaaaatggcca 55715

>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29
          Length = 283100

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 378    gctccatggcctccttgacc 397
              ||||||||||||||||||||
Sbjct: 236046 gctccatggcctccttgacc 236065

>gb|AC147816.2| Xenopus tropicalis clone CH216-106C24, complete sequence
          Length = 152642

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 300   tctaaaagcacacttatcaagaga 323
             ||||||||||||||||| ||||||
Sbjct: 41122 tctaaaagcacacttattaagaga 41145

>emb|BX649538.4| Zebrafish DNA sequence from clone CH211-239N21 in linkage group 3,
             complete sequence
          Length = 147441

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    tcacttgtataagtgcagca 89
             ||||||||||||||||||||
Sbjct: 38883 tcacttgtataagtgcagca 38864

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 378     gctccatggcctccttgacc 397
               ||||||||||||||||||||
Sbjct: 7595821 gctccatggcctccttgacc 7595802

>gb|U18530.1|SCE9871 Saccharomyces cerevisiae chromosome V cosmids 9871, 8199, 9867, 9495
             and lambda clones 6693 and 5898
          Length = 62643

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 405   catcacttccctggccctgg 424
             ||||||||||||||||||||
Sbjct: 22165 catcacttccctggccctgg 22184

>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0478H03
          Length = 167560

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     tttttattaagatatgaatg 38
              ||||||||||||||||||||
Sbjct: 112872 tttttattaagatatgaatg 112891


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,495,829
Number of Sequences: 3902068
Number of extensions: 3495829
Number of successful extensions: 63357
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63169
Number of HSP's gapped (non-prelim): 187
length of query: 444
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 422
effective length of database: 17,147,199,772
effective search space: 7236118303784
effective search space used: 7236118303784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)