>UTX_MOUSE (O70546) Ubiquitously transcribed X chromosome tetratricopeptide|
            repeat protein (Ubiquitously transcribed TPR protein on
            the X chromosome) (Fragment)
          Length = 1333

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 29/98 (29%), Positives = 38/98 (38%), Gaps = 6/98 (6%)
 Frame = +3

Query: 21   SLN*KHSSQISIQHPSNSTVQLPIP---LLDTHTHKTHIT---SCAFRPPCNRPNSRVRR 182
            SLN  HS   +I        Q PI    LL +H     I    S +  P         R 
Sbjct: 775  SLNSPHSGLHTINGEGMEESQSPIKTDLLLVSHRPSPQIIPSMSVSIYPSSAEVLKACRN 834

Query: 183  RGKNEGALAQLTHGESPADRPNSLHAPALPERKINSKT 296
             GKN  + + +   + P  RP S   P LP+ K+N  T
Sbjct: 835  LGKNGLSNSSILLDKCPPPRPPSSPYPPLPKDKLNPPT 872

>YMV6_YEAST (Q04748) Hypothetical 104.7 kDa protein in NCA1-HMS1 intergenic|
           region
          Length = 898

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 140 ISPTLQPSEL*SSSAGQKRGRPCATYSRRIASRP 241
           I+P L+  +  SS +      PC  Y+RRI ++P
Sbjct: 658 INPLLESKQQVSSESSLSTSNPCRFYNRRIITKP 691


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,242,571
Number of Sequences: 219361
Number of extensions: 1323072
Number of successful extensions: 3832
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3832
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)