ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl29d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF306827.1|AF306827 Triticum monococcum subsp. monococcum clo... 52 0.002
2gb|AF306829.1|AF306829 Triticum urartu clone 581 cytosolic acety... 46 0.10
3gb|AF306828.1|AF306828 Triticum turgidum subsp. dicoccoides clon... 46 0.10
4gb|AF306824.1|AF306824 Triticum timopheevii subsp. armeniacum cl... 46 0.10
5gb|DQ400416.1| Triticum aestivum starch synthase IV (SSIV) gene,... 44 0.40
6emb|AL359375.16| Human DNA sequence from clone RP11-93K18 on chr... 42 1.6
7emb|AL031431.8|HS462O23 Human DNA sequence from clone RP3-462O23... 42 1.6
8gb|AC158581.2| Mus musculus chromosome 3, clone RP24-264G1, comp... 42 1.6
9gb|AC079269.8| Homo sapiens chromosome 10 clone RP11-379L21, com... 42 1.6
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
11gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
12emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.6
13gb|AC102278.10| Mus musculus chromosome 3, clone RP24-298A6, com... 42 1.6
14gb|AC116853.12| Mus musculus chromosome 1, clone RP24-400M20, co... 40 6.3
15gb|AC005740.1| Homo sapiens chromosome 5p, BAC clone 50g21 (LBNL... 40 6.3
16gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.3
17gb|AC144948.3| Mus musculus BAC clone RP23-119D7 from chromosome... 40 6.3
18gb|BC092191.1| Rattus norvegicus cDNA clone IMAGE:7111416, **** ... 40 6.3
19gb|AC069113.9| Homo sapiens chromosome 8, clone RP11-597M17, com... 40 6.3
20gb|AF271405.5| Homo sapiens chromosome 8 clone SCb-554J4 map p21... 40 6.3
21gb|AF217759.5| Homo sapiens chromosome 8 clone GS1-45G16 map p21... 40 6.3
22emb|BX323463.24| Zebrafish DNA sequence from clone DKEY-169J7 in... 40 6.3
23gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 40 6.3
24emb|BX927372.14| Zebrafish DNA sequence from clone CH211-241H14 ... 40 6.3
25gb|AC098576.7| Drosophila melanogaster X BAC RP98-3E12 (Roswell ... 40 6.3
26gb|AC122142.1| Caenorhabditis briggsae cosmid CB019M24, complete... 40 6.3
27gb|AC104997.4| Homo sapiens chromosome 8, clone RP11-1149M3, com... 40 6.3
28gb|AC119204.7| Mus musculus chromosome 1, clone RP24-188H2, comp... 40 6.3
29dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
30gb|AC062039.3| Homo sapiens BAC clone RP11-814A15 from 2, comple... 40 6.3
31gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
32gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
33emb|AL954847.17| Zebrafish DNA sequence from clone DKEY-68G8 in ... 40 6.3
34gb|AE003422.2| Drosophila melanogaster chromosome X, section 6 o... 40 6.3
35gb|AC147839.2| Xenopus tropicalis clone CH216-9N23, complete seq... 40 6.3
36gb|BC087131.1| Rattus norvegicus glutamate-ammonia ligase (gluta... 40 6.3
37ref|NM_017073.2| Rattus norvegicus glutamate-ammonia ligase (glu... 40 6.3
38emb|X92074.1|RNGLUSYNI R.norvegicus glutamine synthetase intron 1 40 6.3
39emb|AL021107.1|DMC30B7 Drosophila melanogaster cosmid clone 30B7 40 6.3
40emb|AL805907.5| Mouse DNA sequence from clone RP23-262M20 on chr... 40 6.3 
>gb|AF306827.1|AF306827 Triticum monococcum subsp. monococcum clone 437 cytosolic
           acetyl-CoA carboxylase gene, partial cds
          Length = 1812

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 82  ttgaactgcaaaaacatgttaaatttaggaacagatggtgta 123
           ||||||||||||||| | ||| ||||||||||||| ||||||
Sbjct: 729 ttgaactgcaaaaacgtcttatatttaggaacagagggtgta 770



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 51  attgaactgcaaaaacatcttacatttagg 80
           |||||||||||||||| ||||| |||||||
Sbjct: 728 attgaactgcaaaaacgtcttatatttagg 757



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 52  ttgaactgcaaaaacatcttacatttag 79
           ||||||||||||||| ||||| ||||||
Sbjct: 727 ttgaactgcaaaaacgtcttatatttag 700



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 81  tttgaactgcaaaaacatgttaaatttaggaacaga 116
           |||||||||||||||| | ||| |||||| ||||||
Sbjct: 728 tttgaactgcaaaaacgtcttatatttagaaacaga 693
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>gb|AF306829.1|AF306829 Triticum urartu clone 581 cytosolic acetyl-CoA carboxylase gene,
           partial cds
          Length = 1812

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 81  tttgaactgcaaaaacatgttaaatttaggaacagatggtgta 123
           |||||||| ||||||| | ||| ||||||||||||| ||||||
Sbjct: 728 tttgaactacaaaaacgtcttatatttaggaacagagggtgta 770



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 51  attgaactgcaaaaacatcttacatttag 79
           |||||||||||||||| ||||| ||||||
Sbjct: 728 attgaactgcaaaaacgtcttatatttag 700
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>gb|AF306828.1|AF306828 Triticum turgidum subsp. dicoccoides clone 465 cytosolic acetyl-CoA
           carboxylase gene, partial cds
          Length = 1836

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 81  tttgaactgcaaaaacatgttaaatttaggaacagatggtgta 123
           |||||||| ||||||| | ||| ||||||||||||| ||||||
Sbjct: 728 tttgaactacaaaaacgtcttatatttaggaacagagggtgta 770
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>gb|AF306824.1|AF306824 Triticum timopheevii subsp. armeniacum clone 453 cytosolic
           acetyl-CoA carboxylase gene, partial cds
          Length = 1812

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 81  tttgaactgcaaaaacatgttaaatttaggaacagatggtgta 123
           |||||||| ||||||| | ||| ||||||||||||| ||||||
Sbjct: 728 tttgaactacaaaaacgtcttatatttaggaacagagggtgta 770



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 51  attgaactgcaaaaacatcttacatttag 79
           |||||||||||||||| ||||| ||||||
Sbjct: 728 attgaactgcaaaaacgtcttatatttag 700
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>gb|DQ400416.1| Triticum aestivum starch synthase IV (SSIV) gene, complete cds
          Length = 7137

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 79   ggtttgaactgcaaaaacatgttaaatttaggaacagatggtgtacaaga 128
            ||||| |||||| ||||| | ||| ||||||||||||| |||||| ||||
Sbjct: 2850 ggtttaaactgccaaaacgtcttacatttaggaacagagggtgtagaaga 2801
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>emb|AL359375.16| Human DNA sequence from clone RP11-93K18 on chromosome 10, complete
              sequence
          Length = 126846

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 86     actgcaaaaacatgttaaatt 106
              |||||||||||||||||||||
Sbjct: 113496 actgcaaaaacatgttaaatt 113516
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>emb|AL031431.8|HS462O23 Human DNA sequence from clone RP3-462O23 on chromosome 1p35.1-36.12
             Contains the 3' end of the gene for sister-of-mammalian
             grainyhead (SOM), a novel gene (LOC90529) and a novel gene
             (DJ462O23.2), complete sequence
          Length = 154154

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 148   cttcagtcttttttaacctgc 168
             |||||||||||||||||||||
Sbjct: 30026 cttcagtcttttttaacctgc 30006
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>gb|AC158581.2| Mus musculus chromosome 3, clone RP24-264G1, complete sequence
          Length = 166808

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 360    tgctgagacatccatcatcca 380
              |||||||||||||||||||||
Sbjct: 107588 tgctgagacatccatcatcca 107608
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>gb|AC079269.8| Homo sapiens chromosome 10 clone RP11-379L21, complete sequence
          Length = 196004

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 86    actgcaaaaacatgttaaatt 106
             |||||||||||||||||||||
Sbjct: 92826 actgcaaaaacatgttaaatt 92846
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 18       aaaattactcctactacttat 38
                |||||||||||||||||||||
Sbjct: 25902012 aaaattactcctactacttat 25902032
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 18       aaaattactcctactacttat 38
                |||||||||||||||||||||
Sbjct: 25830188 aaaattactcctactacttat 25830208
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>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 137492

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 18     aaaattactcctactacttat 38
              |||||||||||||||||||||
Sbjct: 123463 aaaattactcctactacttat 123483
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>gb|AC102278.10| Mus musculus chromosome 3, clone RP24-298A6, complete sequence
          Length = 184908

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 360   tgctgagacatccatcatcca 380
             |||||||||||||||||||||
Sbjct: 11976 tgctgagacatccatcatcca 11956
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>gb|AC116853.12| Mus musculus chromosome 1, clone RP24-400M20, complete sequence
          Length = 188514

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    tatgttcctaaatgcattga 55
             ||||||||||||||||||||
Sbjct: 22642 tatgttcctaaatgcattga 22623
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>gb|AC005740.1| Homo sapiens chromosome 5p, BAC clone 50g21 (LBNL H154), complete
             sequence
          Length = 186780

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    ttaaaaattactcctactac 34
             ||||||||||||||||||||
Sbjct: 93607 ttaaaaattactcctactac 93626
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 17      aaaaattactcctactactt 36
               ||||||||||||||||||||
Sbjct: 6871257 aaaaattactcctactactt 6871276
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>gb|AC144948.3| Mus musculus BAC clone RP23-119D7 from chromosome 6, complete sequence
          Length = 213811

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 84    gaactgcaaaaacatgttaaattt 107
             |||||||||| |||||||||||||
Sbjct: 84569 gaactgcaaagacatgttaaattt 84546
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>gb|BC092191.1| Rattus norvegicus cDNA clone IMAGE:7111416, **** WARNING: chimeric
            clone ****
          Length = 4570

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 184  ttcgttcctcacctccagctccat 207
            |||||||||| |||||||||||||
Sbjct: 3089 ttcgttcctctcctccagctccat 3112
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>gb|AC069113.9| Homo sapiens chromosome 8, clone RP11-597M17, complete sequence
          Length = 197616

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    acatcttacatttaggtttg 84
             ||||||||||||||||||||
Sbjct: 30141 acatcttacatttaggtttg 30160
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>gb|AF271405.5| Homo sapiens chromosome 8 clone SCb-554J4 map p21-p11, complete
             sequence
          Length = 109761

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    acatcttacatttaggtttg 84
             ||||||||||||||||||||
Sbjct: 82406 acatcttacatttaggtttg 82425
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>gb|AF217759.5| Homo sapiens chromosome 8 clone GS1-45G16 map p21-p11, complete
             sequence
          Length = 83359

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    acatcttacatttaggtttg 84
             ||||||||||||||||||||
Sbjct: 56748 acatcttacatttaggtttg 56767
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>emb|BX323463.24| Zebrafish DNA sequence from clone DKEY-169J7 in linkage group 14,
            complete sequence
          Length = 86314

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 42   cctaaatgcattgaactgca 61
            ||||||||||||||||||||
Sbjct: 4319 cctaaatgcattgaactgca 4338
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 372     catcatccatgacacatttt 391
               ||||||||||||||||||||
Sbjct: 1431210 catcatccatgacacatttt 1431229
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>emb|BX927372.14| Zebrafish DNA sequence from clone CH211-241H14 in linkage group 13,
             complete sequence
          Length = 138336

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 289   accaaacacaatgaatcagatcac 312
             ||||||||||||||| ||||||||
Sbjct: 18801 accaaacacaatgaaccagatcac 18778
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>gb|AC098576.7| Drosophila melanogaster X BAC RP98-3E12 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 175262

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 444    tggaaaaggaatgtggccgc 463
              ||||||||||||||||||||
Sbjct: 134373 tggaaaaggaatgtggccgc 134392
to top
>gb|AC122142.1| Caenorhabditis briggsae cosmid CB019M24, complete sequence
          Length = 111147

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 74    atttaggtttgaactgcaaaaaca 97
             |||| |||||||||||||||||||
Sbjct: 99839 attttggtttgaactgcaaaaaca 99816
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>gb|AC104997.4| Homo sapiens chromosome 8, clone RP11-1149M3, complete sequence
          Length = 144859

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    acatcttacatttaggtttg 84
             ||||||||||||||||||||
Sbjct: 35448 acatcttacatttaggtttg 35429
to top
>gb|AC119204.7| Mus musculus chromosome 1, clone RP24-188H2, complete sequence
          Length = 178603

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     tatgttcctaaatgcattga 55
              ||||||||||||||||||||
Sbjct: 168853 tatgttcctaaatgcattga 168834
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 17      aaaaattactcctactactt 36
               ||||||||||||||||||||
Sbjct: 6869152 aaaaattactcctactactt 6869171
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>gb|AC062039.3| Homo sapiens BAC clone RP11-814A15 from 2, complete sequence
          Length = 141040

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 94    aacatgttaaatttaggaacagat 117
             ||||||||||||||||||| ||||
Sbjct: 55230 aacatgttaaatttaggaatagat 55207
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>gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1781E12,
             complete sequence
          Length = 120392

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    aaaaattactcctactactt 36
             ||||||||||||||||||||
Sbjct: 67190 aaaaattactcctactactt 67209
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>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11,
             complete sequence
          Length = 166072

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    aaaaattactcctactactt 36
             ||||||||||||||||||||
Sbjct: 37854 aaaaattactcctactactt 37873
to top
>emb|AL954847.17| Zebrafish DNA sequence from clone DKEY-68G8 in linkage group 13, complete
              sequence
          Length = 278040

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 289    accaaacacaatgaatcagatcac 312
              ||||||||||||||| ||||||||
Sbjct: 242072 accaaacacaatgaaccagatcac 242049
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>gb|AE003422.2| Drosophila melanogaster chromosome X, section 6 of 74 of the complete
             sequence
          Length = 300933

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 444   tggaaaaggaatgtggccgc 463
             ||||||||||||||||||||
Sbjct: 38032 tggaaaaggaatgtggccgc 38051
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>gb|AC147839.2| Xenopus tropicalis clone CH216-9N23, complete sequence
          Length = 184473

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    catggaaccatccaaaccca 284
              ||||||||||||||||||||
Sbjct: 152795 catggaaccatccaaaccca 152814
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>gb|BC087131.1| Rattus norvegicus glutamate-ammonia ligase (glutamine synthase), mRNA
            (cDNA clone MGC:94942 IMAGE:7112880), complete cds
          Length = 4157

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 184  ttcgttcctcacctccagctccat 207
            |||||||||| |||||||||||||
Sbjct: 2805 ttcgttcctctcctccagctccat 2782
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>ref|NM_017073.2| Rattus norvegicus glutamate-ammonia ligase (glutamine synthase)
            (Glul), mRNA
          Length = 4157

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 184  ttcgttcctcacctccagctccat 207
            |||||||||| |||||||||||||
Sbjct: 2805 ttcgttcctctcctccagctccat 2782
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>emb|X92074.1|RNGLUSYNI R.norvegicus glutamine synthetase intron 1
          Length = 1938

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 184  ttcgttcctcacctccagctccat 207
            |||||||||| |||||||||||||
Sbjct: 1013 ttcgttcctctcctccagctccat 990
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>emb|AL021107.1|DMC30B7 Drosophila melanogaster cosmid clone 30B7
          Length = 36000

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 444   tggaaaaggaatgtggccgc 463
             ||||||||||||||||||||
Sbjct: 11809 tggaaaaggaatgtggccgc 11828
to top
>emb|AL805907.5| Mouse DNA sequence from clone RP23-262M20 on chromosome X, complete
              sequence
          Length = 221439

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     atgcattgaactgcaaaaac 66
              ||||||||||||||||||||
Sbjct: 137732 atgcattgaactgcaaaaac 137751


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,628,150
Number of Sequences: 3902068
Number of extensions: 4628150
Number of successful extensions: 110877
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110631
Number of HSP's gapped (non-prelim): 246
length of query: 468
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 446
effective length of database: 17,147,199,772
effective search space: 7647651098312
effective search space used: 7647651098312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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