>ref|NM_192023.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2709

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                        
Query: 159  cgctgctgcaagaagaccagcacggccagcaaccccgctccgcacggtatgacaatgtcc 218
            |||||||| ||||||| |||||||||||||  | |||| ||||||||||| || | ||||
Sbjct: 2627 cgctgctgaaagaagagcagcacggccagcgccgccgccccgcacggtatcacgacgtcc 2568

                      
Query: 219  cacgcgacgc 228
            ||||||||||
Sbjct: 2567 cacgcgacgc 2558



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 335  ggtgccccccgcgtagaaccacggcgagat 364
            |||||| ||| |||||||||||||||||||
Sbjct: 2445 ggtgccgcccacgtagaaccacggcgagat 2416



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 404  gatctgagggagcaggaagccgtccagtatcag 436
            |||||| || |||||||| ||||||||||||||
Sbjct: 2379 gatctggggcagcaggaacccgtccagtatcag 2347

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                            
Query: 159      cgctgctgcaagaagaccagcacggccagcaaccccgctccgcacggtatgacaatgtcc 218
                |||||||| ||||||| |||||||||||||  | |||| ||||||||||| || | ||||
Sbjct: 27864694 cgctgctgaaagaagagcagcacggccagcgccgccgccccgcacggtatcacgacgtcc 27864635

                          
Query: 219      cacgcgacgc 228
                ||||||||||
Sbjct: 27864634 cacgcgacgc 27864625



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 339      ccccccgcgtagaaccacggcgagatcgc 367
                ||||| |||||||||||||||||||||||
Sbjct: 27892200 cccccggcgtagaaccacggcgagatcgc 27892172



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                            
Query: 159      cgctgctgcaagaagaccagcacggccagcaaccccgctccgcacggtatgacaatgtcc 218
                |||||||||||||| | ||  | |||||||||| |||||||  |||| |  || ||||||
Sbjct: 27892368 cgctgctgcaagaacagcacgaaggccagcaacgccgctcccaacggcacaacgatgtcc 27892309

                                
Query: 219      cacgcgacgccaaaga 234
                ||||||||||| ||||
Sbjct: 27892308 cacgcgacgccgaaga 27892293



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 81/100 (81%)
 Strand = Plus / Minus

                                                                            
Query: 159      cgctgctgcaagaagaccagcacggccagcaaccccgctccgcacggtatgacaatgtcc 218
                |||||||||||||| | |||||  |||||| || |||| ||  |||| | | | | ||||
Sbjct: 27879131 cgctgctgcaagaacagcagcagcgccagcgacgccgcccccaacggcacggcgacgtcc 27879072

                                                        
Query: 219      cacgcgacgccaaagaggtcgccccgtgggctggcgtaca 258
                ||||||||||| ||||| ||| | |||||||| |||||||
Sbjct: 27879071 cacgcgacgccgaagagatcgtcgcgtgggctcgcgtaca 27879032



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 335      ggtgccccccgcgtagaaccacggcgagat 364
                |||||| ||| |||||||||||||||||||
Sbjct: 27864512 ggtgccgcccacgtagaaccacggcgagat 27864483



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 404      gatctgagggagcaggaagccgtccagtatcag 436
                |||||| || |||||||| ||||||||||||||
Sbjct: 27864446 gatctggggcagcaggaacccgtccagtatcag 27864414

>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1144G04
          Length = 194459

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                         
Query: 159   cgctgctgcaagaagaccagcacggccagcaaccccgctccgcacggtatgacaatgtcc 218
             |||||||| ||||||| |||||||||||||  | |||| ||||||||||| || | ||||
Sbjct: 51375 cgctgctgaaagaagagcagcacggccagcgccgccgccccgcacggtatcacgacgtcc 51316

                       
Query: 219   cacgcgacgc 228
             ||||||||||
Sbjct: 51315 cacgcgacgc 51306



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 339   ccccccgcgtagaaccacggcgagatcgc 367
             ||||| |||||||||||||||||||||||
Sbjct: 78881 cccccggcgtagaaccacggcgagatcgc 78853



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                         
Query: 159   cgctgctgcaagaagaccagcacggccagcaaccccgctccgcacggtatgacaatgtcc 218
             |||||||||||||| | ||  | |||||||||| |||||||  |||| |  || ||||||
Sbjct: 79049 cgctgctgcaagaacagcacgaaggccagcaacgccgctcccaacggcacaacgatgtcc 78990

                             
Query: 219   cacgcgacgccaaaga 234
             ||||||||||| ||||
Sbjct: 78989 cacgcgacgccgaaga 78974



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 81/100 (81%)
 Strand = Plus / Minus

                                                                         
Query: 159   cgctgctgcaagaagaccagcacggccagcaaccccgctccgcacggtatgacaatgtcc 218
             |||||||||||||| | |||||  |||||| || |||| ||  |||| | | | | ||||
Sbjct: 65812 cgctgctgcaagaacagcagcagcgccagcgacgccgcccccaacggcacggcgacgtcc 65753

                                                     
Query: 219   cacgcgacgccaaagaggtcgccccgtgggctggcgtaca 258
             ||||||||||| ||||| ||| | |||||||| |||||||
Sbjct: 65752 cacgcgacgccgaagagatcgtcgcgtgggctcgcgtaca 65713



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 335   ggtgccccccgcgtagaaccacggcgagat 364
             |||||| ||| |||||||||||||||||||
Sbjct: 51193 ggtgccgcccacgtagaaccacggcgagat 51164



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 404   gatctgagggagcaggaagccgtccagtatcag 436
             |||||| || |||||||| ||||||||||||||
Sbjct: 51127 gatctggggcagcaggaacccgtccagtatcag 51095

>dbj|AK068284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146I22, full
            insert sequence
          Length = 3081

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                        
Query: 159  cgctgctgcaagaagaccagcacggccagcaaccccgctccgcacggtatgacaatgtcc 218
            |||||||| ||||||| |||||||||||||  | |||| ||||||||||| || | ||||
Sbjct: 2670 cgctgctgaaagaagagcagcacggccagcgccgccgccccgcacggtatcacgacgtcc 2611

                      
Query: 219  cacgcgacgc 228
            ||||||||||
Sbjct: 2610 cacgcgacgc 2601



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 335  ggtgccccccgcgtagaaccacggcgagat 364
            |||||| ||| |||||||||||||||||||
Sbjct: 2488 ggtgccgcccacgtagaaccacggcgagat 2459



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 404  gatctgagggagcaggaagccgtccagtatcag 436
            |||||| || |||||||| ||||||||||||||
Sbjct: 2422 gatctggggcagcaggaacccgtccagtatcag 2390

>ref|NM_192028.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2925

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 339  ccccccgcgtagaaccacggcgagatcgc 367
            ||||| |||||||||||||||||||||||
Sbjct: 2675 cccccggcgtagaaccacggcgagatcgc 2647



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                        
Query: 159  cgctgctgcaagaagaccagcacggccagcaaccccgctccgcacggtatgacaatgtcc 218
            |||||||||||||| | ||  | |||||||||| |||||||  |||| |  || ||||||
Sbjct: 2843 cgctgctgcaagaacagcacgaaggccagcaacgccgctcccaacggcacaacgatgtcc 2784

                            
Query: 219  cacgcgacgccaaaga 234
            ||||||||||| ||||
Sbjct: 2783 cacgcgacgccgaaga 2768

>ref|NM_192026.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2904

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 81/100 (81%)
 Strand = Plus / Minus

                                                                        
Query: 159  cgctgctgcaagaagaccagcacggccagcaaccccgctccgcacggtatgacaatgtcc 218
            |||||||||||||| | |||||  |||||| || |||| ||  |||| | | | | ||||
Sbjct: 2774 cgctgctgcaagaacagcagcagcgccagcgacgccgcccccaacggcacggcgacgtcc 2715

                                                    
Query: 219  cacgcgacgccaaagaggtcgccccgtgggctggcgtaca 258
            ||||||||||| ||||| ||| | |||||||| |||||||
Sbjct: 2714 cacgcgacgccgaagagatcgtcgcgtgggctcgcgtaca 2675

>dbj|AK099717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013086I08, full
            insert sequence
          Length = 3050

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 81/100 (81%)
 Strand = Plus / Minus

                                                                        
Query: 159  cgctgctgcaagaagaccagcacggccagcaaccccgctccgcacggtatgacaatgtcc 218
            |||||||||||||| | |||||  |||||| || |||| ||  |||| | | | | ||||
Sbjct: 2855 cgctgctgcaagaacagcagcagcgccagcgacgccgcccccaacggcacggcgacgtcc 2796

                                                    
Query: 219  cacgcgacgccaaagaggtcgccccgtgggctggcgtaca 258
            ||||||||||| ||||| ||| | |||||||| |||||||
Sbjct: 2795 cacgcgacgccgaagagatcgtcgcgtgggctcgcgtaca 2756

>gb|AY146173.1| HIV-1 isolate 134eMa88 from Malawi envelope glycoprotein (env)
           gene, partial cds
          Length = 417

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 85  tatctcgttttctgctagacta 106
           ||||||||||||||||||||||
Sbjct: 165 tatctcgttttctgctagacta 144

>gb|AY596295.1| Haloarcula marismortui ATCC 43049 plasmid pNG600, complete sequence
          Length = 155300

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 411   gggagcaggaagccgtccagt 431
             |||||||||||||||||||||
Sbjct: 83632 gggagcaggaagccgtccagt 83652

>emb|AJ429852.1|HIM429852 Human immunodeficiency virus type 1 proviral partial env gene for
           gp120, strain 97NE82
          Length = 1071

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 85  tatctcgttttctgctagact 105
           |||||||||||||||||||||
Sbjct: 458 tatctcgttttctgctagact 438

>dbj|AB003011.1| Human immunodeficiency virus type 1 env gene for envelope
           glycoprotein, partial cds, clone 63PE341t
          Length = 720

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 85  tatctcgttttctgctagact 105
           |||||||||||||||||||||
Sbjct: 447 tatctcgttttctgctagact 427

>dbj|AB003010.1| Human immunodeficiency virus type 1 env gene for envelope
           glycoprotein, partial cds, clone 63PE331t
          Length = 720

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 85  tatctcgttttctgctagact 105
           |||||||||||||||||||||
Sbjct: 447 tatctcgttttctgctagact 427

>dbj|AB003009.1| Human immunodeficiency virus type 1 env gene for envelope
           glycoprotein, partial cds, clone 63PE321t
          Length = 720

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 85  tatctcgttttctgctagact 105
           |||||||||||||||||||||
Sbjct: 447 tatctcgttttctgctagact 427

>ref|XM_581281.2| PREDICTED: Bos taurus similar to Probable G-protein coupled
           receptor 35 (LOC505056), mRNA
          Length = 1389

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 agaagaccagcacggccagc 188
           ||||||||||||||||||||
Sbjct: 673 agaagaccagcacggccagc 654

>emb|AL158064.16| Human DNA sequence from clone RP11-470M1 on chromosome 13, complete
              sequence
          Length = 160587

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 386    cagggacacgttcagaatga 405
              ||||||||||||||||||||
Sbjct: 102882 cagggacacgttcagaatga 102901

>emb|AL031746.9|PFMAL1P3 Plasmodium falciparum DNA from MAL1P3
          Length = 67970

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 84    gtatctcgttttctgctagactag 107
             |||| |||||||||||||||||||
Sbjct: 19211 gtatatcgttttctgctagactag 19234

>gb|DQ061633.1| HIV-1 isolate K69_04_279 from Belgium envelope glycoprotein (env)
           gene, partial cds
          Length = 444

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 87  tctcgttttctgctagacta 106
           ||||||||||||||||||||
Sbjct: 130 tctcgttttctgctagacta 111

>gb|AC099336.2| Homo sapiens chromosome 1 clone RP11-175B9, complete sequence
          Length = 159838

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    ctgctgcaagaagaccagca 180
              ||||||||||||||||||||
Sbjct: 136411 ctgctgcaagaagaccagca 136430

>gb|AF324892.1|AF324889S4 Homo sapiens myosin phosphatase target subunit 2 (MYPT2) gene, exons 11
              through 24, and complete cds
          Length = 150000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    ctgctgcaagaagaccagca 180
              ||||||||||||||||||||
Sbjct: 126944 ctgctgcaagaagaccagca 126963

>gb|AC020622.3|F22M8 Sequence of BAC F22M8 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 47295

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   ctcctcctctgcgatccaat 157
             ||||||||||||||||||||
Sbjct: 32896 ctcctcctctgcgatccaat 32915

>gb|AC015973.2|AC015973 Homo sapiens BAC clone RP11-366C6 from Y, complete sequence
          Length = 171834

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    ctgctgcaagaagaccagca 180
              ||||||||||||||||||||
Sbjct: 109931 ctgctgcaagaagaccagca 109950

>dbj|AB016878.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MQP15
          Length = 85567

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 196   ctccgcacggtatgacaatg 215
             ||||||||||||||||||||
Sbjct: 14791 ctccgcacggtatgacaatg 14810


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,467,563
Number of Sequences: 3902068
Number of extensions: 2467563
Number of successful extensions: 42710
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42641
Number of HSP's gapped (non-prelim): 69
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)