>PROB_RHOS4 (Q3IXX8) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 370

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +1

Query: 220 RIRHVPPPAAFLRLEQRRAAVDVVQLARL---CLSRHPVVPEEVLQDLLHGRPRRRVL 384
           R+ H+PP    L   Q  AAV  ++LAR     L+ H +   +VL  L     RRR L
Sbjct: 64  RVLHLPPGPLALEQSQAAAAVGQIRLARAYEEVLAPHGITTAQVLVTLEDTEDRRRYL 121

>PROB_AGRT5 (Q8UBS0) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 389

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
 Frame = +1

Query: 241 PAAFLRLEQRRAAVDVVQLARL-----CLSRHPVVPEEVLQDLLHGRPRRRVL 384
           P+  L+LE+ +AA  V Q+A        LSRH +V  ++L  L     RRR L
Sbjct: 70  PSGALKLEESQAAAAVGQIALARAWSESLSRHEIVAGQILLTLSDTEERRRYL 122

>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)|
          Length = 1262

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 379 PSGAADHEGGPAAP-PPVRQDVCSSKGVP 296
           P GAA  +GGP AP PP  Q V   +G P
Sbjct: 837 PPGAAGPQGGPGAPGPPGPQGVKGERGSP 865

>PDC_ASPPA (P51844) Pyruvate decarboxylase (EC 4.1.1.1)|
          Length = 577

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = +1

Query: 289 VQLARLCLSRHPVVPEEV----LQDLLHGRPRRRVLP 387
           V +A++ LS H   P E+    LQ LLH RP R  +P
Sbjct: 133 VTVAQVSLSDHRTAPSEIDRILLQCLLHSRPVRIAIP 169

>HXD4_MOUSE (P10628) Homeobox protein Hox-D4 (Hox-4.2) (Hox-5.1)|
          Length = 250

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -1

Query: 391 HGGEPSGAADHEGGPAAPPP 332
           HG EPSG   H G P  P P
Sbjct: 78  HGQEPSGPGSHYGAPGEPCP 97

>FMNL_HUMAN (O95466) Formin-like 1 protein (Formin-like protein) (Leukocyte|
           formin) (CLL-associated antigen KW-13)
          Length = 1100

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 385 GEPSGAADHEGGPAAPPP 332
           G  +G+A+   GPAAPPP
Sbjct: 2   GNAAGSAEQPAGPAAPPP 19

>JAK1_BRARE (O12990) Tyrosine-protein kinase Jak1 (EC 2.7.10.2) (Janus kinase|
           1) (Jak-1)
          Length = 1153

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 4/28 (14%)
 Frame = -2

Query: 369 RPTMKEVLQH----LLRYDRMSAQAKAC 298
           RPT+KE+L+H    LLR D +  Q + C
Sbjct: 512 RPTLKELLEHLQGQLLRTDNLRFQLRRC 539

>M3K12_HUMAN (Q12852) Mitogen-activated protein kinase kinase kinase 12 (EC|
           2.7.11.25) (Mixed lineage kinase) (Leucine-zipper
           protein kinase) (ZPK) (Dual leucine zipper bearing
           kinase) (DLK) (MAPK-upstream kinase) (MUK)
          Length = 859

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 388 GGEPSGAADHEGGPAAPPPVRQDVCSSKG 302
           G    GA    G P +PPP R D   S+G
Sbjct: 619 GSRGRGATGGAGDPGSPPPARGDTPPSEG 647


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,831,275
Number of Sequences: 219361
Number of extensions: 574637
Number of successful extensions: 2040
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2034
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)