ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl29d01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
2dbj|AK120538.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 3e-17
3dbj|AK103854.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 3e-17
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 98 3e-17
5emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa... 98 3e-17
6dbj|AB011271.1| Oryza sativa (japonica cultivar-group) mRNA for ... 98 3e-17
7gb|BT018483.1| Zea mays clone EL01N0424D02.d mRNA sequence 96 1e-16
8gb|AY106264.1| Zea mays PCO124599 mRNA sequence 92 2e-15
9ref|NM_194535.1| Oryza sativa (japonica cultivar-group) putative... 42 1.7
10ref|NM_183723.1| Oryza sativa (japonica cultivar-group), predic... 42 1.7
11ref|XM_469298.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.7
12ref|XM_471521.1| Oryza sativa (japonica cultivar-group), predic... 42 1.7
13gb|AC148393.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
14gb|AC146938.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
15gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genom... 42 1.7
16gb|AC037197.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
17gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
18gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
19gb|AC133335.4| Oryza sativa chromosome 3 BAC OSJNBa0005H05 genom... 42 1.7
20gb|AC114896.5| Oryza sativa chromosome 3 BAC OSJNBa0091B22 genom... 42 1.7
21gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
22gb|AC136225.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
23gb|AC144736.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
24gb|AC144452.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
25gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 1... 42 1.7
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.7
27gb|AC133337.5| Oryza sativa chromosome 3 BAC OSJNBa0023A13 genom... 42 1.7
28gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
29emb|AL731604.3|OSJN00247 Oryza sativa genomic DNA, chromosome 4,... 42 1.7
30gb|AC119149.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
31gb|AC068654.2| Genomic Sequence For Oryza sativa (japonica culti... 42 1.7
32dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
33dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
34dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
35dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
36dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
37dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
38dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
39dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
40dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
41dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
42emb|AL731583.2|OSJN00231 Oryza sativa genomic DNA, chromosome 4,... 42 1.7
43gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 geno... 42 1.7
44gb|AC090714.9| Oryza sativa chromosome 3 BAC OSJNBb0031G04 genom... 42 1.7
45dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
46dbj|AP004767.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
47dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
48dbj|AP004180.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
49dbj|AP005745.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
50dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
51dbj|AP004123.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
52gb|AY828170.1| Oryza sativa (japonica cultivar-group) clone noaC... 42 1.7
53gb|AY828167.1| Oryza sativa (japonica cultivar-group) clone noaC... 42 1.7
54gb|AY828160.1| Oryza sativa (japonica cultivar-group) clone noaC... 42 1.7
55gb|AY828121.1| Oryza sativa (japonica cultivar-group) clone noaC... 42 1.7
56gb|AY828060.1| Oryza sativa (japonica cultivar-group) clone noaC... 42 1.7
57gb|AY827971.1| Oryza sativa (japonica cultivar-group) clone noaC... 42 1.7
58gb|AY827965.1| Oryza sativa (japonica cultivar-group) clone noaC... 42 1.7
59dbj|AP005096.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
60gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
61gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
62emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4,... 42 1.7
63gb|AC110904.8| Mus musculus chromosome 7, clone RP24-174I24, com... 40 6.7
64ref|XM_450376.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.7
65gb|AC145810.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.7
66gb|AC125457.3| Mus musculus BAC clone RP24-195A4 from chromosome... 40 6.7
67emb|AL390204.11| Human DNA sequence from clone RP11-196D4 on chr... 40 6.7
68emb|AL138814.13| Human DNA sequence from clone RP11-10M21 on chr... 40 6.7
69emb|AL049570.11|HSJ437I16 Human DNA sequence from clone RP3-437I... 40 6.7
70gb|AC069063.22| Homo sapiens 3 BAC RP11-58D2 (Roswell Park Cance... 40 6.7
71emb|CR378680.1| Photobacterium profundum SS9 chromosome 2; segme... 40 6.7
72emb|BX883047.1| Rattus norvegicus chromosome 20, major histocomp... 40 6.7
73emb|BX883046.1| Rattus norvegicus chromosome 20, major histocomp... 40 6.7
74gb|AY884588.1| Neogobius cephalarges haplotype A cytochrome b ge... 40 6.7
75emb|AJ605534.1| Pseudomonas sp. CFBP 11402 hrcR gene (partial), ... 40 6.7
76emb|BX571850.7| Zebrafish DNA sequence from clone DKEY-259L18 in... 40 6.7
77gb|AC006065.3| Homo sapiens 12q24.2 BAC RPCI11-407A16 (Roswell P... 40 6.7
78gb|AF336797.2|AF336797 Homo sapiens small-conductance calcium-ac... 40 6.7
79dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
80emb|BX546498.7| Mouse DNA sequence from clone RP23-217I22 on chr... 40 6.7
81dbj|AP005608.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
82dbj|AK070630.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
83gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 40 6.7 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 99/113 (87%), Gaps = 2/113 (1%)
 Strand = Plus / Minus

                                                                            
Query: 375      aagttagcaggtggccaacttaaccctcttttccgcagaagtgaaaaaggctgggttgac 434
                |||||||||||  |||||||||||||||| ||| |||||||||| || | | || | |||
Sbjct: 23440743 aagttagcaggcagccaacttaaccctctcttctgcagaagtgataaggacaggct-gac 23440685

                                                                     
Query: 435      acatgtactgatgcatgagttagtgaggaccctccgactctgctttgaggatg 487
                ||||||| ||||||||||||||||||||| |||||||||||||| | ||||||
Sbjct: 23440684 acatgtattgatgcatgagttagtgagga-cctccgactctgctgtaaggatg 23440633



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                            
Query: 245      gaccaaagttcgatgcatgcaatggatgcaaggtaaagcgagagcacccggaccataagc 304
                |||||||||||||||||||||||| |||||| | ||| ||| ||||||| |||| || ||
Sbjct: 23440899 gaccaaagttcgatgcatgcaatgaatgcaatggaaaacgatagcacccagaccctacgc 23440840

                   
Query: 305      atg 307
                |||
Sbjct: 23440839 atg 23440837



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 162      aaaataatcctgtgacaatgc 182
                |||||||||||||||||||||
Sbjct: 23440984 aaaataatcctgtgacaatgc 23440964
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>dbj|AK120538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129D16, full
            insert sequence
          Length = 3056

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 99/113 (87%), Gaps = 2/113 (1%)
 Strand = Plus / Minus

                                                                        
Query: 375  aagttagcaggtggccaacttaaccctcttttccgcagaagtgaaaaaggctgggttgac 434
            |||||||||||  |||||||||||||||| ||| |||||||||| || | | || | |||
Sbjct: 2321 aagttagcaggcagccaacttaaccctctcttctgcagaagtgataaggacaggct-gac 2263

                                                                 
Query: 435  acatgtactgatgcatgagttagtgaggaccctccgactctgctttgaggatg 487
            ||||||| ||||||||||||||||||||| |||||||||||||| | ||||||
Sbjct: 2262 acatgtattgatgcatgagttagtgagga-cctccgactctgctgtaaggatg 2211



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                        
Query: 245  gaccaaagttcgatgcatgcaatggatgcaaggtaaagcgagagcacccggaccataagc 304
            |||||||||||||||||||||||| |||||| | ||| ||| ||||||| |||| || ||
Sbjct: 2477 gaccaaagttcgatgcatgcaatgaatgcaatggaaaacgatagcacccagaccctacgc 2418

               
Query: 305  atg 307
            |||
Sbjct: 2417 atg 2415



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 162  aaaataatcctgtgacaatgc 182
            |||||||||||||||||||||
Sbjct: 2562 aaaataatcctgtgacaatgc 2542
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>dbj|AK103854.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148M08, full
            insert sequence
          Length = 2341

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 99/113 (87%), Gaps = 2/113 (1%)
 Strand = Plus / Minus

                                                                        
Query: 375  aagttagcaggtggccaacttaaccctcttttccgcagaagtgaaaaaggctgggttgac 434
            |||||||||||  |||||||||||||||| ||| |||||||||| || | | || | |||
Sbjct: 1589 aagttagcaggcagccaacttaaccctctcttctgcagaagtgataaggacaggct-gac 1531

                                                                 
Query: 435  acatgtactgatgcatgagttagtgaggaccctccgactctgctttgaggatg 487
            ||||||| ||||||||||||||||||||| |||||||||||||| | ||||||
Sbjct: 1530 acatgtattgatgcatgagttagtgagga-cctccgactctgctgtaaggatg 1479



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                        
Query: 245  gaccaaagttcgatgcatgcaatggatgcaaggtaaagcgagagcacccggaccataagc 304
            |||||||||||||||||||||||| |||||| | ||| ||| ||||||| |||| || ||
Sbjct: 1745 gaccaaagttcgatgcatgcaatgaatgcaatggaaaacgatagcacccagaccctacgc 1686

               
Query: 305  atg 307
            |||
Sbjct: 1685 atg 1683



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 162  aaaataatcctgtgacaatgc 182
            |||||||||||||||||||||
Sbjct: 1830 aaaataatcctgtgacaatgc 1810
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 99/113 (87%), Gaps = 2/113 (1%)
 Strand = Plus / Minus

                                                                            
Query: 375      aagttagcaggtggccaacttaaccctcttttccgcagaagtgaaaaaggctgggttgac 434
                |||||||||||  |||||||||||||||| ||| |||||||||| || | | || | |||
Sbjct: 23368934 aagttagcaggcagccaacttaaccctctcttctgcagaagtgataaggacaggct-gac 23368876

                                                                     
Query: 435      acatgtactgatgcatgagttagtgaggaccctccgactctgctttgaggatg 487
                ||||||| ||||||||||||||||||||| |||||||||||||| | ||||||
Sbjct: 23368875 acatgtattgatgcatgagttagtgagga-cctccgactctgctgtaaggatg 23368824



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                            
Query: 245      gaccaaagttcgatgcatgcaatggatgcaaggtaaagcgagagcacccggaccataagc 304
                |||||||||||||||||||||||| |||||| | ||| ||| ||||||| |||| || ||
Sbjct: 23369090 gaccaaagttcgatgcatgcaatgaatgcaatggaaaacgatagcacccagaccctacgc 23369031

                   
Query: 305      atg 307
                |||
Sbjct: 23369030 atg 23369028



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 162      aaaataatcctgtgacaatgc 182
                |||||||||||||||||||||
Sbjct: 23369175 aaaataatcctgtgacaatgc 23369155
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>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 162261

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 99/113 (87%), Gaps = 2/113 (1%)
 Strand = Plus / Plus

                                                                         
Query: 375   aagttagcaggtggccaacttaaccctcttttccgcagaagtgaaaaaggctgggttgac 434
             |||||||||||  |||||||||||||||| ||| |||||||||| || | | || | |||
Sbjct: 61416 aagttagcaggcagccaacttaaccctctcttctgcagaagtgataaggacaggct-gac 61474

                                                                  
Query: 435   acatgtactgatgcatgagttagtgaggaccctccgactctgctttgaggatg 487
             ||||||| ||||||||||||||||||||| |||||||||||||| | ||||||
Sbjct: 61475 acatgtattgatgcatgagttagtgagga-cctccgactctgctgtaaggatg 61526



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                         
Query: 245   gaccaaagttcgatgcatgcaatggatgcaaggtaaagcgagagcacccggaccataagc 304
             |||||||||||||||||||||||| |||||| | ||| ||| ||||||| |||| || ||
Sbjct: 61260 gaccaaagttcgatgcatgcaatgaatgcaatggaaaacgatagcacccagaccctacgc 61319

                
Query: 305   atg 307
             |||
Sbjct: 61320 atg 61322



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 162   aaaataatcctgtgacaatgc 182
             |||||||||||||||||||||
Sbjct: 61175 aaaataatcctgtgacaatgc 61195
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>dbj|AB011271.1| Oryza sativa (japonica cultivar-group) mRNA for importin-beta2,
            partial cds
          Length = 3676

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 99/113 (87%), Gaps = 2/113 (1%)
 Strand = Plus / Minus

                                                                        
Query: 375  aagttagcaggtggccaacttaaccctcttttccgcagaagtgaaaaaggctgggttgac 434
            |||||||||||  |||||||||||||||| ||| |||||||||| || | | || | |||
Sbjct: 2923 aagttagcaggcagccaacttaaccctctcttctgcagaagtgataaggacaggct-gac 2865

                                                                 
Query: 435  acatgtactgatgcatgagttagtgaggaccctccgactctgctttgaggatg 487
            ||||||| ||||||||||||||||||||| |||||||||||||| | ||||||
Sbjct: 2864 acatgtattgatgcatgagttagtgagga-cctccgactctgctgtaaggatg 2813



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                        
Query: 245  gaccaaagttcgatgcatgcaatggatgcaaggtaaagcgagagcacccggaccataagc 304
            |||||||||||||||||||||||| |||||| | ||| ||| ||||||| |||| || ||
Sbjct: 3079 gaccaaagttcgatgcatgcaatgaatgcaatggaaaacgatagcacccagaccctacgc 3020

               
Query: 305  atg 307
            |||
Sbjct: 3019 atg 3017



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 162  aaaataatcctgtgacaatgc 182
            |||||||||||||||||||||
Sbjct: 3164 aaaataatcctgtgacaatgc 3144
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>gb|BT018483.1| Zea mays clone EL01N0424D02.d mRNA sequence
          Length = 1744

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 51/52 (98%)
 Strand = Plus / Minus

                                                               
Query: 427 gggttgacacatgtactgatgcatgagttagtgaggaccctccgactctgct 478
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 875 gggttgacacatgtactgatgcatgagttagtggggaccctccgactctgct 824



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 158  tacaaaaataatcctgtgacaa 179
            ||||||||||||||||||||||
Sbjct: 1176 tacaaaaataatcctgtgacaa 1155
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>gb|AY106264.1| Zea mays PCO124599 mRNA sequence
          Length = 1372

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 94/106 (88%), Gaps = 3/106 (2%)
 Strand = Plus / Minus

                                                                       
Query: 375 aagttagcaggtggccaactt-aaccctcttttc-cgcagaagtgaaaaaggctgggttg 432
           ||||||||||  ||||| ||| |||||||||||| ||||||||  | || ||| ||||||
Sbjct: 690 aagttagcagacggccagcttgaaccctcttttctcgcagaagcaagaagggc-gggttg 632

                                                         
Query: 433 acacatgtactgatgcatgagttagtgaggaccctccgactctgct 478
           ||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 631 acacatgtagtgatgcatgagttagtgaggaccctcagactctgct 586



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 158 tacaaaaataatcctgtgacaatgc 182
           |||||||||||||||||||||||||
Sbjct: 939 tacaaaaataatcctgtgacaatgc 915
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>ref|NM_194535.1| Oryza sativa (japonica cultivar-group) putative retroelement
           (OSJNBa0015O22.1), mRNA
          Length = 2967

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 61  tgggatgaatgcaaaacaatg 81
           |||||||||||||||||||||
Sbjct: 313 tgggatgaatgcaaaacaatg 333
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>ref|NM_183723.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1413

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 61  tgggatgaatgcaaaacaatg 81
           |||||||||||||||||||||
Sbjct: 313 tgggatgaatgcaaaacaatg 333
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>ref|XM_469298.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1128

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 61  tgggatgaatgcaaaacaatg 81
           |||||||||||||||||||||
Sbjct: 772 tgggatgaatgcaaaacaatg 792
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>ref|XM_471521.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1872

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 61  tgggatgaatgcaaaacaatg 81
           |||||||||||||||||||||
Sbjct: 127 tgggatgaatgcaaaacaatg 147
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>gb|AC148393.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0044A08 map near S6115, complete sequence
          Length = 158583

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 61    tgggatgaatgcaaaacaatg 81
             |||||||||||||||||||||
Sbjct: 26703 tgggatgaatgcaaaacaatg 26683
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>gb|AC146938.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062O09
              map near S6115, complete sequence
          Length = 148654

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     tgggatgaatgcaaaacaatg 81
              |||||||||||||||||||||
Sbjct: 120406 tgggatgaatgcaaaacaatg 120386
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>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete
             sequence
          Length = 132981

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    tgggatgaatgcaaaacaatg 81
             |||||||||||||||||||||
Sbjct: 58268 tgggatgaatgcaaaacaatg 58288
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>gb|AC037197.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0065H03,
              complete sequence
          Length = 141017

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     tgggatgaatgcaaaacaatg 81
              |||||||||||||||||||||
Sbjct: 141005 tgggatgaatgcaaaacaatg 140985
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>gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0094J09,
              complete sequence
          Length = 168192

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     tgggatgaatgcaaaacaatg 81
              |||||||||||||||||||||
Sbjct: 112411 tgggatgaatgcaaaacaatg 112391
to top
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNAa0068G15, complete sequence
          Length = 130161

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    tgggatgaatgcaaaacaatg 81
             |||||||||||||||||||||
Sbjct: 87951 tgggatgaatgcaaaacaatg 87971
to top
>gb|AC133335.4| Oryza sativa chromosome 3 BAC OSJNBa0005H05 genomic sequence, complete
             sequence
          Length = 55268

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 61    tgggatgaatgcaaaacaatg 81
             |||||||||||||||||||||
Sbjct: 28862 tgggatgaatgcaaaacaatg 28842
to top
>gb|AC114896.5| Oryza sativa chromosome 3 BAC OSJNBa0091B22 genomic sequence, complete
              sequence
          Length = 115815

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     tgggatgaatgcaaaacaatg 81
              |||||||||||||||||||||
Sbjct: 107708 tgggatgaatgcaaaacaatg 107688
to top
>gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0088F07, complete sequence
          Length = 139180

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    tgggatgaatgcaaaacaatg 81
             |||||||||||||||||||||
Sbjct: 73885 tgggatgaatgcaaaacaatg 73905
to top
>gb|AC136225.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0022L07, complete sequence
          Length = 142134

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 61    tgggatgaatgcaaaacaatg 81
             |||||||||||||||||||||
Sbjct: 98623 tgggatgaatgcaaaacaatg 98603
to top
>gb|AC144736.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
            OSJNBa0008E07, complete sequence
          Length = 146679

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 61   tgggatgaatgcaaaacaatg 81
            |||||||||||||||||||||
Sbjct: 2628 tgggatgaatgcaaaacaatg 2608
to top
>gb|AC144452.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
              OSJNBa0025G07, complete sequence
          Length = 167136

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     tgggatgaatgcaaaacaatg 81
              |||||||||||||||||||||
Sbjct: 112262 tgggatgaatgcaaaacaatg 112242
to top
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06,
             complete sequence
          Length = 185449

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    tgggatgaatgcaaaacaatg 81
             |||||||||||||||||||||
Sbjct: 17790 tgggatgaatgcaaaacaatg 17810
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 26609144 tgggatgaatgcaaaacaatg 26609124



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 19851872 tgggatgaatgcaaaacaatg 19851852



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 18153663 tgggatgaatgcaaaacaatg 18153683



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 17784407 tgggatgaatgcaaaacaatg 17784427
to top
>gb|AC133337.5| Oryza sativa chromosome 3 BAC OSJNBa0023A13 genomic sequence, complete
             sequence
          Length = 72745

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 61    tgggatgaatgcaaaacaatg 81
             |||||||||||||||||||||
Sbjct: 44871 tgggatgaatgcaaaacaatg 44851
to top
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
              Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     tgggatgaatgcaaaacaatg 81
              |||||||||||||||||||||
Sbjct: 536831 tgggatgaatgcaaaacaatg 536811
to top
>emb|AL731604.3|OSJN00247 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042D13,
              complete sequence
          Length = 163429

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 61     tgggatgaatgcaaaacaatg 81
              |||||||||||||||||||||
Sbjct: 138758 tgggatgaatgcaaaacaatg 138778
to top
>gb|AC119149.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0079E01, complete sequence
          Length = 132870

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 61    tgggatgaatgcaaaacaatg 81
             |||||||||||||||||||||
Sbjct: 93160 tgggatgaatgcaaaacaatg 93140
to top
>gb|AC068654.2| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar
            Nipponbare Clone OSJNBa0015O22 From Chromosome 10,
            complete sequence
          Length = 189349

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 61   tgggatgaatgcaaaacaatg 81
            |||||||||||||||||||||
Sbjct: 4439 tgggatgaatgcaaaacaatg 4419
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 11610207 tgggatgaatgcaaaacaatg 11610187



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 10639421 tgggatgaatgcaaaacaatg 10639441
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 12519429 tgggatgaatgcaaaacaatg 12519449



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 61      tgggatgaatgcaaaacaatg 81
               |||||||||||||||||||||
Sbjct: 1946235 tgggatgaatgcaaaacaatg 1946255



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 248     caaagttcgatgcatgcaat 267
               ||||||||||||||||||||
Sbjct: 8767649 caaagttcgatgcatgcaat 8767668
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 12313255 tgggatgaatgcaaaacaatg 12313235



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 61      tgggatgaatgcaaaacaatg 81
               |||||||||||||||||||||
Sbjct: 7999543 tgggatgaatgcaaaacaatg 7999563



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     tgggatgaatgcaaaacaatg 81
              |||||||||||||||||||||
Sbjct: 536831 tgggatgaatgcaaaacaatg 536811
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 61      tgggatgaatgcaaaacaatg 81
               |||||||||||||||||||||
Sbjct: 2934130 tgggatgaatgcaaaacaatg 2934110



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 252     gttcgatgcatgcaatggat 271
               ||||||||||||||||||||
Sbjct: 5036389 gttcgatgcatgcaatggat 5036408
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 16253714 tgggatgaatgcaaaacaatg 16253694
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 13522375 tgggatgaatgcaaaacaatg 13522395
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 21193102 tgggatgaatgcaaaacaatg 21193122



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 14239290 tgggatgaatgcaaaacaatg 14239270



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 12235150 tgggatgaatgcaaaacaatg 12235130
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 26700467 tgggatgaatgcaaaacaatg 26700447



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 19844899 tgggatgaatgcaaaacaatg 19844879



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 18147204 tgggatgaatgcaaaacaatg 18147224



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 17777948 tgggatgaatgcaaaacaatg 17777968
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 14011443 tgggatgaatgcaaaacaatg 14011423



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 11450183 tgggatgaatgcaaaacaatg 11450203



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 62       gggatgaatgcaaaacaatg 81
                ||||||||||||||||||||
Sbjct: 15188870 gggatgaatgcaaaacaatg 15188851
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 16510309 tgggatgaatgcaaaacaatg 16510329



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 11825801 tgggatgaatgcaaaacaatg 11825781
to top
>emb|AL731583.2|OSJN00231 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013A04,
             complete sequence
          Length = 188209

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    tgggatgaatgcaaaacaatg 81
             |||||||||||||||||||||
Sbjct: 38648 tgggatgaatgcaaaacaatg 38668
to top
>gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 genomic sequence, complete
              sequence
          Length = 136712

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     tgggatgaatgcaaaacaatg 81
              |||||||||||||||||||||
Sbjct: 131958 tgggatgaatgcaaaacaatg 131938
to top
>gb|AC090714.9| Oryza sativa chromosome 3 BAC OSJNBb0031G04 genomic sequence,
            complete sequence
          Length = 137297

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 61   tgggatgaatgcaaaacaatg 81
            |||||||||||||||||||||
Sbjct: 4161 tgggatgaatgcaaaacaatg 4141
to top
>dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0030M21
          Length = 155970

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    tgggatgaatgcaaaacaatg 81
             |||||||||||||||||||||
Sbjct: 32675 tgggatgaatgcaaaacaatg 32695
to top
>dbj|AP004767.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1460_H08
          Length = 113514

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    tgggatgaatgcaaaacaatg 81
             |||||||||||||||||||||
Sbjct: 30979 tgggatgaatgcaaaacaatg 30999
to top
>dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1012D10
          Length = 168267

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 61    tgggatgaatgcaaaacaatg 81
             |||||||||||||||||||||
Sbjct: 38086 tgggatgaatgcaaaacaatg 38066
to top
>dbj|AP004180.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1126_B05
          Length = 117057

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 61    tgggatgaatgcaaaacaatg 81
             |||||||||||||||||||||
Sbjct: 81081 tgggatgaatgcaaaacaatg 81061
to top
>dbj|AP005745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0017O03
          Length = 180651

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     tgggatgaatgcaaaacaatg 81
              |||||||||||||||||||||
Sbjct: 125122 tgggatgaatgcaaaacaatg 125102
to top
>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1123E10
          Length = 134641

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 61     tgggatgaatgcaaaacaatg 81
              |||||||||||||||||||||
Sbjct: 102058 tgggatgaatgcaaaacaatg 102078
to top
>dbj|AP004123.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1654_A02
          Length = 128520

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 61     tgggatgaatgcaaaacaatg 81
              |||||||||||||||||||||
Sbjct: 119655 tgggatgaatgcaaaacaatg 119675
to top
>gb|AY828170.1| Oryza sativa (japonica cultivar-group) clone noaCRR1_CH10-12 noaCRR1
            retrotransposon, partial sequence
          Length = 4424

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 61   tgggatgaatgcaaaacaatg 81
            |||||||||||||||||||||
Sbjct: 2518 tgggatgaatgcaaaacaatg 2538
to top
>gb|AY828167.1| Oryza sativa (japonica cultivar-group) clone noaCRR1_CH10-9 noaCRR1
            retrotransposon, partial sequence
          Length = 5134

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 61   tgggatgaatgcaaaacaatg 81
            |||||||||||||||||||||
Sbjct: 3192 tgggatgaatgcaaaacaatg 3212
to top
>gb|AY828160.1| Oryza sativa (japonica cultivar-group) clone noaCRR1_CH10-2 noaCRR1
            retrotransposon, partial sequence
          Length = 4436

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 61   tgggatgaatgcaaaacaatg 81
            |||||||||||||||||||||
Sbjct: 2531 tgggatgaatgcaaaacaatg 2551
to top
>gb|AY828121.1| Oryza sativa (japonica cultivar-group) clone noaCRR1_CH8-13 noaCRR1
            retrotransposon, partial sequence
          Length = 4834

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 61   tgggatgaatgcaaaacaatg 81
            |||||||||||||||||||||
Sbjct: 2681 tgggatgaatgcaaaacaatg 2701
to top
>gb|AY828060.1| Oryza sativa (japonica cultivar-group) clone noaCRR1_CH4-26 noaCRR1
            retrotransposon, partial sequence
          Length = 3827

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 61   tgggatgaatgcaaaacaatg 81
            |||||||||||||||||||||
Sbjct: 1953 tgggatgaatgcaaaacaatg 1973
to top
>gb|AY827971.1| Oryza sativa (japonica cultivar-group) clone noaCRR1_CH1-10 noaCRR1
            retrotransposon, partial sequence
          Length = 4140

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 61   tgggatgaatgcaaaacaatg 81
            |||||||||||||||||||||
Sbjct: 2499 tgggatgaatgcaaaacaatg 2519
to top
>gb|AY827965.1| Oryza sativa (japonica cultivar-group) clone noaCRR1_CH1-4 noaCRR1
            retrotransposon, partial sequence
          Length = 4258

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 61   tgggatgaatgcaaaacaatg 81
            |||||||||||||||||||||
Sbjct: 2351 tgggatgaatgcaaaacaatg 2371
to top
>dbj|AP005096.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1104G07
          Length = 119643

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 61    tgggatgaatgcaaaacaatg 81
             |||||||||||||||||||||
Sbjct: 43892 tgggatgaatgcaaaacaatg 43872
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 12320595 tgggatgaatgcaaaacaatg 12320575



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 61      tgggatgaatgcaaaacaatg 81
               |||||||||||||||||||||
Sbjct: 8004642 tgggatgaatgcaaaacaatg 8004662



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     tgggatgaatgcaaaacaatg 81
              |||||||||||||||||||||
Sbjct: 536828 tgggatgaatgcaaaacaatg 536808
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 61       tgggatgaatgcaaaacaatg 81
                |||||||||||||||||||||
Sbjct: 12598736 tgggatgaatgcaaaacaatg 12598756



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 61      tgggatgaatgcaaaacaatg 81
               |||||||||||||||||||||
Sbjct: 1954016 tgggatgaatgcaaaacaatg 1954036



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 248     caaagttcgatgcatgcaat 267
               ||||||||||||||||||||
Sbjct: 8838412 caaagttcgatgcatgcaat 8838431
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>emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0058J09,
             complete sequence
          Length = 164911

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 61    tgggatgaatgcaaaacaatg 81
             |||||||||||||||||||||
Sbjct: 93217 tgggatgaatgcaaaacaatg 93197
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>gb|AC110904.8| Mus musculus chromosome 7, clone RP24-174I24, complete sequence
          Length = 150036

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 412   gaagtgaaaaaggctgggtt 431
             ||||||||||||||||||||
Sbjct: 66763 gaagtgaaaaaggctgggtt 66782
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>ref|XM_450376.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1022

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 252 gttcgatgcatgcaatggat 271
           ||||||||||||||||||||
Sbjct: 846 gttcgatgcatgcaatggat 827
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>gb|AC145810.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0059C14, complete sequence
          Length = 142138

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   caaagttcgatgcatgcaat 267
             ||||||||||||||||||||
Sbjct: 66420 caaagttcgatgcatgcaat 66439
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>gb|AC125457.3| Mus musculus BAC clone RP24-195A4 from chromosome X, complete sequence
          Length = 127812

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 387   ggccaacttaaccctctttt 406
             ||||||||||||||||||||
Sbjct: 78565 ggccaacttaaccctctttt 78584
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>emb|AL390204.11| Human DNA sequence from clone RP11-196D4 on chromosome 1 Contains the
             5' end of the KCNN3 gene for potassium intermediate/small
             conductance calcium-activated channel, subfamily N, member
             3, complete sequence
          Length = 89566

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    gtctcagtttttaaccaaaa 41
             ||||||||||||||||||||
Sbjct: 70763 gtctcagtttttaaccaaaa 70782
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>emb|AL138814.13| Human DNA sequence from clone RP11-10M21 on chromosome 13 Contains the
             5' end of a novel gene, complete sequence
          Length = 114290

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    aaaagaacccttacaaaaca 57
             ||||||||||||||||||||
Sbjct: 86796 aaaagaacccttacaaaaca 86777
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>emb|AL049570.11|HSJ437I16 Human DNA sequence from clone RP3-437I16 on chromosome 1p35.1-35.3
             Contains the 3' end of the gene PTPRU for protein tyrosine
             phosphatase receptor type U and a novel gene, complete
             sequence
          Length = 120385

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 409   gcagaagtgaaaaaggctgg 428
             ||||||||||||||||||||
Sbjct: 12237 gcagaagtgaaaaaggctgg 12218
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>gb|AC069063.22| Homo sapiens 3 BAC RP11-58D2 (Roswell Park Cancer Institute Human BAC
            Library) complete sequence
          Length = 112126

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  actgatgcatgagttagtga 460
            ||||||||||||||||||||
Sbjct: 5068 actgatgcatgagttagtga 5049
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>emb|CR378680.1| Photobacterium profundum SS9 chromosome 2; segment 6/7
          Length = 349751

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    tgcataatggatgaataagc 216
              ||||||||||||||||||||
Sbjct: 193722 tgcataatggatgaataagc 193741
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>emb|BX883047.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
             assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
             RT1n haplotype; segment 6/11
          Length = 349571

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 349   gaagctcctggattcccttt 368
             ||||||||||||||||||||
Sbjct: 30235 gaagctcctggattcccttt 30216
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>emb|BX883046.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
              assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
              RT1n haplotype; segment 5/11
          Length = 349047

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 349    gaagctcctggattcccttt 368
              ||||||||||||||||||||
Sbjct: 299866 gaagctcctggattcccttt 299847
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>gb|AY884588.1| Neogobius cephalarges haplotype A cytochrome b gene, partial cds;
           mitochondrial
          Length = 451

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 161 aaaaataatcctgtgacaat 180
           ||||||||||||||||||||
Sbjct: 143 aaaaataatcctgtgacaat 124
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>emb|AJ605534.1| Pseudomonas sp. CFBP 11402 hrcR gene (partial), hrcS gene and hrcT
           gene (partial), strain CFBP 11402
          Length = 892

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 381 gcaggtggccaacttaaccc 400
           ||||||||||||||||||||
Sbjct: 762 gcaggtggccaacttaaccc 781
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>emb|BX571850.7| Zebrafish DNA sequence from clone DKEY-259L18 in linkage group 23,
              complete sequence
          Length = 236136

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     aatgcaaaacaatgcaaatg 87
              ||||||||||||||||||||
Sbjct: 109779 aatgcaaaacaatgcaaatg 109798
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>gb|AC006065.3| Homo sapiens 12q24.2 BAC RPCI11-407A16 (Roswell Park Cancer Institute
              Human BAC Library) complete sequence
          Length = 191134

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    atgtcccacatggtgaagtt 142
              ||||||||||||||||||||
Sbjct: 99991  atgtcccacatggtgaagtt 100010
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>gb|AF336797.2|AF336797 Homo sapiens small-conductance calcium-activated potassium channel
             (KCNN3) gene, complete cds
          Length = 163217

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    gtctcagtttttaaccaaaa 41
             ||||||||||||||||||||
Sbjct: 15985 gtctcagtttttaaccaaaa 15966
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>dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1008E06
          Length = 170228

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   gttcgatgcatgcaatggat 271
             ||||||||||||||||||||
Sbjct: 38506 gttcgatgcatgcaatggat 38525
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>emb|BX546498.7| Mouse DNA sequence from clone RP23-217I22 on chromosome X, complete
              sequence
          Length = 142658

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 387    ggccaacttaaccctctttt 406
              ||||||||||||||||||||
Sbjct: 133376 ggccaacttaaccctctttt 133395
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>dbj|AP005608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0008C07
          Length = 146008

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    gggatgaatgcaaaacaatg 81
             ||||||||||||||||||||
Sbjct: 72645 gggatgaatgcaaaacaatg 72626
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>dbj|AK070630.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058P10, full
           insert sequence
          Length = 1022

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 252 gttcgatgcatgcaatggat 271
           ||||||||||||||||||||
Sbjct: 846 gttcgatgcatgcaatggat 827
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>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 260    catgcaatggatgcaaggta 279
              ||||||||||||||||||||
Sbjct: 911769 catgcaatggatgcaaggta 911788


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,024,732
Number of Sequences: 3902068
Number of extensions: 4024732
Number of successful extensions: 73285
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72513
Number of HSP's gapped (non-prelim): 760
length of query: 493
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 471
effective length of database: 17,147,199,772
effective search space: 8076331092612
effective search space used: 8076331092612
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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