>gb|AC121238.17| Medicago truncatula clone mth2-34p9, complete sequence
          Length = 104878

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    ataagagtatatgaaaaaca 47
             ||||||||||||||||||||
Sbjct: 88002 ataagagtatatgaaaaaca 87983

>gb|AE014223.1| Streptococcus agalactiae 2603V/R section 33 of 100 of the complete
             genome
          Length = 20531

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 12    aaattatttcgcattcataagagtatatgaaa 43
             |||||||||| | |||| ||||||||||||||
Sbjct: 12654 aaattatttcactttcaaaagagtatatgaaa 12685

>emb|AL691468.12| Mouse DNA sequence from clone RP23-20K13 on chromosome 4 Contains the
            3' end of a novel gene (4933412J03Rik), a
            glyceraldehyde-3-phosphate dehydrogenase (Gapd)
            pseudogene, the Tnfsf15 gene for tumor necrosis factor
            (ligand) superfamily member 15 and the 3' end of the
            Tnfsf8 for tumor necrosis factor (ligand) superfamily
            member 8, complete sequence
          Length = 212420

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   caggactcaaaatctgaact 65
            ||||||||||||||||||||
Sbjct: 8236 caggactcaaaatctgaact 8255

>emb|AL766846.1|SAG766846 Streptococcus agalactiae NEM316 complete genome, segment 4
          Length = 224050

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 12     aaattatttcgcattcataagagtatatgaaa 43
              |||||||||| | |||| ||||||||||||||
Sbjct: 134845 aaattatttcactttcaaaagagtatatgaaa 134876

>gb|AC159333.7| Mus musculus 10 BAC RP23-409C14 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 201801

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    taagagtatatgaaaaacag 48
             ||||||||||||||||||||
Sbjct: 61275 taagagtatatgaaaaacag 61256

>emb|AL772261.5| Mouse DNA sequence from clone RP23-276J11 on chromosome 4, complete
             sequence
          Length = 191041

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 35    tatatgaaaaacaggactcaaaat 58
             |||||||||||| |||||||||||
Sbjct: 79442 tatatgaaaaactggactcaaaat 79419

>gb|AC002433.2| Homo sapiens BAC clone CTA-317M2 from 7, complete sequence
          Length = 139919

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 41     aaaaacaggactcaaaatc 59
              |||||||||||||||||||
Sbjct: 119588 aaaaacaggactcaaaatc 119606

>gb|AC146510.3| Pan troglodytes BAC clone RP43-64B24 from 7, complete sequence
          Length = 153089

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    aaaaacaggactcaaaatc 59
             |||||||||||||||||||
Sbjct: 99143 aaaaacaggactcaaaatc 99125

>emb|AL031623.1|CEH21M04 Caenorhabditis elegans Fosmid H21M04, complete sequence
          Length = 1878

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 52   tcaaaatctgaactagcac 70
            |||||||||||||||||||
Sbjct: 1337 tcaaaatctgaactagcac 1355

>gb|AC145920.1| Pan troglodytes BAC clone RP43-10C15 from 7, complete sequence
          Length = 188373

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 41     aaaaacaggactcaaaatc 59
              |||||||||||||||||||
Sbjct: 174646 aaaaacaggactcaaaatc 174664

>emb|AL139087.13| Human DNA sequence from clone RP11-83D23 on chromosome 13q31.3-33.1,
              complete sequence
          Length = 170776

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 38     atgaaaaacaggactcaaa 56
              |||||||||||||||||||
Sbjct: 118055 atgaaaaacaggactcaaa 118037

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 1        aaccatgacgaaaattatt 19
                |||||||||||||||||||
Sbjct: 14456502 aaccatgacgaaaattatt 14456484



 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 1        aaccatgacgaaaattatt 19
                |||||||||||||||||||
Sbjct: 14428634 aaccatgacgaaaattatt 14428616

>emb|BX842566.4| Mouse DNA sequence from clone RP23-174M7 on chromosome X, complete
             sequence
          Length = 180961

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 22    gcattcataagagtatatg 40
             |||||||||||||||||||
Sbjct: 94240 gcattcataagagtatatg 94222

>gb|AC122131.4| Homo sapiens BAC clone RP13-597L20 from 4, complete sequence
          Length = 38020

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 33    agtatatgaaaaacaggactcaa 55
             |||| ||||||||||||||||||
Sbjct: 18578 agtaaatgaaaaacaggactcaa 18556

>gb|AC138391.2| Homo sapiens chromosome 3 clone RP11-167C9, complete sequence
          Length = 184254

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 26    tcataagagtatatgaaaa 44
             |||||||||||||||||||
Sbjct: 76533 tcataagagtatatgaaaa 76551

>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0465E03
          Length = 151206

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      aaccatgacgaaaattatt 19
              |||||||||||||||||||
Sbjct: 148305 aaccatgacgaaaattatt 148287



 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      aaccatgacgaaaattatt 19
              |||||||||||||||||||
Sbjct: 120437 aaccatgacgaaaattatt 120419

>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1585_D02
          Length = 103172

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     aaccatgacgaaaattatt 19
             |||||||||||||||||||
Sbjct: 56067 aaccatgacgaaaattatt 56049



 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     aaccatgacgaaaattatt 19
             |||||||||||||||||||
Sbjct: 28199 aaccatgacgaaaattatt 28181


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 817,967
Number of Sequences: 3902068
Number of extensions: 817967
Number of successful extensions: 46709
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46664
Number of HSP's gapped (non-prelim): 45
length of query: 93
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 72
effective length of database: 17,151,101,840
effective search space: 1234879332480
effective search space used: 1234879332480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)