Clone Name | rbastl29c09 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_470948.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1932 Score = 157 bits (79), Expect = 3e-35 Identities = 100/107 (93%) Strand = Plus / Minus Query: 293 gcgttctcgaagccgtgcaggtcgctgacccggttcatggacttgcgcatgatggtcacc 352 ||||||||||| ||||| || |||||||| ||||||||||||||||||||||||| |||| Sbjct: 1922 gcgttctcgaaaccgtggagatcgctgacacggttcatggacttgcgcatgatggccacc 1863 Query: 353 ttggccagctgctccgccgcgcgccacgccgacgttggggtcagcgg 399 ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1862 ttggccagctgctccgccgcgcgccacgccgacgtcggcgtcagcgg 1816
>emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1160F02, complete sequence Length = 139971 Score = 157 bits (79), Expect = 3e-35 Identities = 100/107 (93%) Strand = Plus / Plus Query: 293 gcgttctcgaagccgtgcaggtcgctgacccggttcatggacttgcgcatgatggtcacc 352 ||||||||||| ||||| || |||||||| ||||||||||||||||||||||||| |||| Sbjct: 112486 gcgttctcgaaaccgtggagatcgctgacacggttcatggacttgcgcatgatggccacc 112545 Query: 353 ttggccagctgctccgccgcgcgccacgccgacgttggggtcagcgg 399 ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 112546 ttggccagctgctccgccgcgcgccacgccgacgtcggcgtcagcgg 112592
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 157 bits (79), Expect = 3e-35 Identities = 100/107 (93%) Strand = Plus / Plus Query: 293 gcgttctcgaagccgtgcaggtcgctgacccggttcatggacttgcgcatgatggtcacc 352 ||||||||||| ||||| || |||||||| ||||||||||||||||||||||||| |||| Sbjct: 112486 gcgttctcgaaaccgtggagatcgctgacacggttcatggacttgcgcatgatggccacc 112545 Query: 353 ttggccagctgctccgccgcgcgccacgccgacgttggggtcagcgg 399 ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 112546 ttggccagctgctccgccgcgcgccacgccgacgtcggcgtcagcgg 112592
>emb|AL442103.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0102C09, complete sequence Length = 72636 Score = 157 bits (79), Expect = 3e-35 Identities = 100/107 (93%) Strand = Plus / Plus Query: 293 gcgttctcgaagccgtgcaggtcgctgacccggttcatggacttgcgcatgatggtcacc 352 ||||||||||| ||||| || |||||||| ||||||||||||||||||||||||| |||| Sbjct: 59372 gcgttctcgaaaccgtggagatcgctgacacggttcatggacttgcgcatgatggccacc 59431 Query: 353 ttggccagctgctccgccgcgcgccacgccgacgttggggtcagcgg 399 ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 59432 ttggccagctgctccgccgcgcgccacgccgacgtcggcgtcagcgg 59478
>emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0068L06, complete sequence Length = 145517 Score = 157 bits (79), Expect = 3e-35 Identities = 100/107 (93%) Strand = Plus / Plus Query: 293 gcgttctcgaagccgtgcaggtcgctgacccggttcatggacttgcgcatgatggtcacc 352 ||||||||||| ||||| || |||||||| ||||||||||||||||||||||||| |||| Sbjct: 43735 gcgttctcgaaaccgtggagatcgctgacacggttcatggacttgcgcatgatggccacc 43794 Query: 353 ttggccagctgctccgccgcgcgccacgccgacgttggggtcagcgg 399 ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 43795 ttggccagctgctccgccgcgcgccacgccgacgtcggcgtcagcgg 43841
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 366 ccgccgcgcgccacgccgacgttg 389 |||||||||||||||||||||||| Sbjct: 463420 ccgccgcgcgccacgccgacgttg 463397
>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13 map near C50029S, complete sequence Length = 129900 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 362 tgctccgccgcgcgccacgccg 383 |||||||||||||||||||||| Sbjct: 88635 tgctccgccgcgcgccacgccg 88614
>gb|BC080011.1| Xenopus laevis MGC81884 protein, mRNA (cDNA clone MGC:81884 IMAGE:7008796), complete cds Length = 2759 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 120 aacaacaacaatggcagcagca 141 |||||||||||||||||||||| Sbjct: 376 aacaacaacaatggcagcagca 397
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 362 tgctccgccgcgcgccacgccg 383 |||||||||||||||||||||| Sbjct: 24853400 tgctccgccgcgcgccacgccg 24853379 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 30869668 tcctcgccgtcgccgtcgtc 30869687 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 21932088 tcctcgccgtcgccgtcgtc 21932069
>gb|AC113596.8| Mus musculus chromosome 5, clone RP23-374B20, complete sequence Length = 203500 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 cttataattaattaattaacaa 40 |||||||||||||||||||||| Sbjct: 123027 cttataattaattaattaacaa 123006
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 308 tgcaggtcgctgacccggttca 329 |||||||||||||||||||||| Sbjct: 3040949 tgcaggtcgctgacccggttca 3040970
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 362 tgctccgccgcgcgccacgccg 383 |||||||||||||||||||||| Sbjct: 24944723 tgctccgccgcgcgccacgccg 24944702 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 30960191 tcctcgccgtcgccgtcgtc 30960210 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 21925117 tcctcgccgtcgccgtcgtc 21925098
>gb|AC007770.5|AC007770 Drosophila melanogaster, chromosome 3R, region 86C-86C, BAC clone BACR03J13, complete sequence Length = 179260 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 120 aacaacaacaatggcagcagca 141 |||||||||||||||||||||| Sbjct: 54499 aacaacaacaatggcagcagca 54520
>gb|AC007685.2|AC007685 Homo sapiens BAC clone RP11-558O12 from Y, complete sequence Length = 178377 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 39 aagaaggaaaggaaatgaaagg 60 |||||||||||||||||||||| Sbjct: 83519 aagaaggaaaggaaatgaaagg 83498
>gb|AE003687.3| Drosophila melanogaster chromosome 3R, section 25 of 118 of the complete sequence Length = 260168 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 120 aacaacaacaatggcagcagca 141 |||||||||||||||||||||| Sbjct: 107675 aacaacaacaatggcagcagca 107696
>gb|AC101978.6| Mus musculus chromosome 3, clone RP24-335I21, complete sequence Length = 185025 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 agaaggaaaggaaatgaaagg 60 ||||||||||||||||||||| Sbjct: 169287 agaaggaaaggaaatgaaagg 169307
>gb|AY622965.1| Homo sapiens dermokine-beta mRNA, complete cds Length = 1431 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 acaacaacaatggcagcagca 141 ||||||||||||||||||||| Sbjct: 785 acaacaacaatggcagcagca 805
>emb|CR388050.16| Zebrafish DNA sequence from clone CH211-287N14 in linkage group 24, complete sequence Length = 176933 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 taattaattaattaacaagaa 43 ||||||||||||||||||||| Sbjct: 157014 taattaattaattaacaagaa 157034
>gb|AC110563.4| Mus musculus chromosome 3, clone RP23-287O4, complete sequence Length = 237878 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 agaaggaaaggaaatgaaagg 60 ||||||||||||||||||||| Sbjct: 122623 agaaggaaaggaaatgaaagg 122643
>gb|AC112494.2| Homo sapiens X BAC RP11-1L9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155681 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 aattaattaattaacaagaag 44 ||||||||||||||||||||| Sbjct: 147097 aattaattaattaacaagaag 147077
>gb|AY358412.1| Homo sapiens clone DNA59212 KFQG729 (UNQ729) mRNA, complete cds Length = 1734 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 acaacaacaatggcagcagca 141 ||||||||||||||||||||| Sbjct: 968 acaacaacaatggcagcagca 988
>emb|AL591423.6| Human DNA sequence from clone RP11-134P18 on chromosome 9 Contains a novel gene, the 5' end of a novel gene and a CpG island, complete sequence Length = 54193 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 agaaggaaaggaaatgaaagg 60 ||||||||||||||||||||| Sbjct: 21619 agaaggaaaggaaatgaaagg 21639
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 20 ttataattaattaattaacaagaaggaaa 48 |||| ||| |||||||||||||||||||| Sbjct: 1575429 ttattattgattaattaacaagaaggaaa 1575457
>gb|BC035311.1| Homo sapiens dermokine, mRNA (cDNA clone MGC:21664 IMAGE:4752921), complete cds Length = 1982 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 acaacaacaatggcagcagca 141 ||||||||||||||||||||| Sbjct: 962 acaacaacaatggcagcagca 982
>emb|BX511086.5| Zebrafish DNA sequence from clone DKEY-38P8 in linkage group 7, complete sequence Length = 228170 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 ttataattaattaattaacaa 40 ||||||||||||||||||||| Sbjct: 168118 ttataattaattaattaacaa 168098
>gb|AC159546.4| Mus musculus 6 BAC RP23-450B23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192227 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 taacaagaaggaaaggaaatg 55 ||||||||||||||||||||| Sbjct: 126664 taacaagaaggaaaggaaatg 126684
>gb|AC108360.3| Homo sapiens 12q BAC RP11-29C9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157546 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 attaattaacaagaaggaaag 49 ||||||||||||||||||||| Sbjct: 74953 attaattaacaagaaggaaag 74933
>ref|NM_033317.2| Homo sapiens dermokine (ZD52F10), transcript variant 2, mRNA Length = 1982 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 acaacaacaatggcagcagca 141 ||||||||||||||||||||| Sbjct: 962 acaacaacaatggcagcagca 982
>gb|AC105204.5| Homo sapiens chromosome 15, clone RP11-1087J2, complete sequence Length = 210658 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 agaaggaaaggaaatgaaagg 60 ||||||||||||||||||||| Sbjct: 137762 agaaggaaaggaaatgaaagg 137782
>gb|AC090431.9| Mus Musculus Strain C57BL6/J chromosome 14 RP23-324C9, complete sequence Length = 227949 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 attaattaattaacaagaagg 45 ||||||||||||||||||||| Sbjct: 121338 attaattaattaacaagaagg 121358
>gb|AC110781.3| Homo sapiens BAC clone RP11-383A19 from 7, complete sequence Length = 44985 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 agcagcacctctagccgtccg 155 ||||||||||||||||||||| Sbjct: 9814 agcagcacctctagccgtccg 9834
>gb|AC013551.10| Homo sapiens chromosome 15, clone RP11-133P13, complete sequence Length = 153823 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 agaaggaaaggaaatgaaagg 60 ||||||||||||||||||||| Sbjct: 102025 agaaggaaaggaaatgaaagg 102045
>gb|AY789697.1| Homo sapiens dermokine-gamma 2 mRNA, complete cds, alternatively spliced Length = 1293 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 acaacaacaatggcagcagca 141 ||||||||||||||||||||| Sbjct: 791 acaacaacaatggcagcagca 811
>gb|AY789696.1| Homo sapiens dermokine-gamma 1 mRNA, complete cds, alternatively spliced Length = 1257 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 acaacaacaatggcagcagca 141 ||||||||||||||||||||| Sbjct: 791 acaacaacaatggcagcagca 811
>gb|AY789695.1| Homo sapiens dermokine-beta mRNA, complete cds Length = 1437 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 acaacaacaatggcagcagca 141 ||||||||||||||||||||| Sbjct: 791 acaacaacaatggcagcagca 811
>gb|AC006285.13| Homo sapiens chromosome 22 clone p1087l10 map 22q11, complete sequence Length = 150172 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 aaaacaaagatcatggagctc 251 ||||||||||||||||||||| Sbjct: 60103 aaaacaaagatcatggagctc 60123
>gb|AC016025.14| Homo sapiens chromosome 22 clone b342k14 map 22q11, complete sequence Length = 180269 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 aaaacaaagatcatggagctc 251 ||||||||||||||||||||| Sbjct: 15916 aaaacaaagatcatggagctc 15936
>gb|AY823228.1| Candida tropicalis NADPH-cytochrome P450 oxidoreductase (CPR-b) gene, complete cds Length = 3245 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 agaaggaaaggaaatgaaagg 60 ||||||||||||||||||||| Sbjct: 703 agaaggaaaggaaatgaaagg 683
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ttcctcgccgtcgccgtcgtc 284 ||||||||||||||||||||| Sbjct: 6068193 ttcctcgccgtcgccgtcgtc 6068173
>gb|AC011701.22|AC011701 Homo sapiens 12 BAC RP11-937I21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 205510 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 agaaggaaaggaaatgaaagg 60 ||||||||||||||||||||| Sbjct: 124197 agaaggaaaggaaatgaaagg 124177
>gb|AC108721.5| Homo sapiens 12 BAC RP11-272B17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 217422 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 attaattaacaagaaggaaag 49 ||||||||||||||||||||| Sbjct: 91836 attaattaacaagaaggaaag 91816
>gb|AC138125.1| Homo sapiens chromosome 19 clone LLNLR-228H6, complete sequence Length = 11311 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 acaacaacaatggcagcagca 141 ||||||||||||||||||||| Sbjct: 3914 acaacaacaatggcagcagca 3894
>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008C11 Length = 157205 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ttcctcgccgtcgccgtcgtc 284 ||||||||||||||||||||| Sbjct: 123363 ttcctcgccgtcgccgtcgtc 123343
>gb|AC002389.1|AC002389 Human DNA from chromosome 19 specific cosmid R28461, genomic sequence, complete sequence Length = 46275 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 acaacaacaatggcagcagca 141 ||||||||||||||||||||| Sbjct: 1069 acaacaacaatggcagcagca 1049
>emb|AL714027.8| Mouse DNA sequence from clone RP23-96E23 on chromosome X, complete sequence Length = 175809 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 gcagatcctagtatttcactt 103 ||||||||||||||||||||| Sbjct: 74609 gcagatcctagtatttcactt 74589
>gb|AC164310.2| Mus musculus BAC clone RP23-139E15 from chromosome 8, complete sequence Length = 204269 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ttataattaattaattaaca 39 |||||||||||||||||||| Sbjct: 30306 ttataattaattaattaaca 30287
>ref|XM_510601.1| PREDICTED: Pan troglodytes similar to vacuolar protein sorting 33B (yeast homolog)); vacuolar protein sorting 33B (yeast homolog) (LOC453657), mRNA Length = 3615 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 tcaccttggccagctgctcc 367 |||||||||||||||||||| Sbjct: 718 tcaccttggccagctgctcc 699
>ref|XM_469809.1| Oryza sativa (japonica cultivar-group), mRNA Length = 474 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 205 tcctcgccgtcgccgtcgtc 224
>ref|NM_184957.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1659 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 839 tcctcgccgtcgccgtcgtc 820
>ref|NM_197310.1| Oryza sativa (japonica cultivar-group) putative serine peptidase (OSJNBa0055O03.8), mRNA Length = 1509 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 59 tcctcgccgtcgccgtcgtc 78
>ref|NM_190000.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1035 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 938 tcctcgccgtcgccgtcgtc 919
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 100859 tcctcgccgtcgccgtcgtc 100878
>gb|AC168277.2| Mus musculus BAC RP24-186L17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 155635 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 agcaagaatgaatcaagtct 20 |||||||||||||||||||| Sbjct: 119445 agcaagaatgaatcaagtct 119464
>gb|AY023309.1| Oryza sativa microsatellite MRG5634 containing (GGT)X9, closest to marker S10602, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 100 tcctcgccgtcgccgtcgtc 81
>gb|AC133931.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013M05 map C3, complete sequence Length = 131117 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttataattaattaattaa 37 |||||||||||||||||||| Sbjct: 49153 tcttataattaattaattaa 49172
>gb|AC154791.3| Mus musculus BAC clone RP24-482P18 from chromosome 16, complete sequence Length = 188918 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttataattaattaattaa 37 |||||||||||||||||||| Sbjct: 123435 tcttataattaattaattaa 123416
>gb|U23450.1| Caenorhabditis elegans cosmid C30B5, complete sequence Length = 41334 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aattaattaattaacaagaa 43 |||||||||||||||||||| Sbjct: 28362 aattaattaattaacaagaa 28381
>gb|AC147079.4| Pan troglodytes BAC clone RP43-184E24 from 7, complete sequence Length = 218644 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gaaggaaaggaaatgaaagg 60 |||||||||||||||||||| Sbjct: 189365 gaaggaaaggaaatgaaagg 189384
>gb|AY439135.1| Cyprinid microsatellite library MRB-2003 microsatellite Cyp-G17 sequence Length = 587 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 acaagaaggaaaggaaatgaaagg 60 ||||||||||||||||| |||||| Sbjct: 192 acaagaaggaaaggaaaggaaagg 169 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 acaagaaggaaaggaaatgaaagg 60 ||||||||||||||||| |||||| Sbjct: 100 acaagaaggaaaggaaaggaaagg 77
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ccgccgcgcgccacgccgacgttg 389 |||||||||||| ||||||||||| Sbjct: 1702750 ccgccgcgcgcctcgccgacgttg 1702773
>ref|NM_181577.2| Mus musculus coiled-coil domain containing 85A (Ccdc85a), mRNA Length = 2302 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 atggcagcagcacctctagc 149 |||||||||||||||||||| Sbjct: 1366 atggcagcagcacctctagc 1385
>gb|AC159994.7| Mus musculus chromosome 7, clone RP23-368F23, complete sequence Length = 181238 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ttaacaagaaggaaaggaaa 53 |||||||||||||||||||| Sbjct: 171270 ttaacaagaaggaaaggaaa 171251
>gb|AC073867.6| Oryza sativa chromosome 10 BAC OSJNBa0055O03 genomic sequence, complete sequence Length = 82909 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 20566 tcctcgccgtcgccgtcgtc 20585
>gb|BC020949.1| Mus musculus coiled-coil domain containing 85A, mRNA (cDNA clone IMAGE:3489582), partial cds Length = 4440 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 atggcagcagcacctctagc 149 |||||||||||||||||||| Sbjct: 356 atggcagcagcacctctagc 375
>gb|AC129906.2| Homo sapiens chromosome 8, clone CTC-820M8, complete sequence Length = 119122 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gaaggaaaggaaatgaaagg 60 |||||||||||||||||||| Sbjct: 65702 gaaggaaaggaaatgaaagg 65683
>gb|AC105142.4| Homo sapiens chromosome 8, clone CTD-3240I20, complete sequence Length = 112106 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gaaggaaaggaaatgaaagg 60 |||||||||||||||||||| Sbjct: 563 gaaggaaaggaaatgaaagg 582
>emb|AL954134.16| Zebrafish DNA sequence from clone CH211-267E7, complete sequence Length = 160551 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttataattaattaattaa 37 |||||||||||||||||||| Sbjct: 54220 tcttataattaattaattaa 54239
>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete sequence Length = 122496 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 73422 tcctcgccgtcgccgtcgtc 73403
>gb|AC102792.7| Mus musculus chromosome 7, clone RP23-370I17, complete sequence Length = 215999 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taattaattaattaacaaga 42 |||||||||||||||||||| Sbjct: 187502 taattaattaattaacaaga 187521
>gb|AY137503.1|AY137501S3 Pongo pygmaeus insulin precursor (INS) gene, complete cds Length = 4126 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ggtcaccttggccagctgct 365 |||||||||||||||||||| Sbjct: 3855 ggtcaccttggccagctgct 3836
>emb|AL391136.10| Human DNA sequence from clone RP11-304C14 on chromosome 10 Contains part of the TLL2 gene for tolloid-like 2, complete sequence Length = 66188 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aattaattaattaacaagaa 43 |||||||||||||||||||| Sbjct: 1181 aattaattaattaacaagaa 1162
>emb|AL355517.12| Human DNA sequence from clone RP11-254A5 on chromosome 10, complete sequence Length = 171348 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tataattaattaattaacaa 40 |||||||||||||||||||| Sbjct: 65791 tataattaattaattaacaa 65772
>emb|AL136181.13| Human DNA sequence from clone RP11-35J23 on chromosome 10 Contains two novel genes, the DNTT gene for terminal deoxynucleotidyltransferase (TDT), the TMEM10 gene for transmembrane protein 10 (TMP10, HTMP10) and the 3' end of the TLL2 gene for tolloid-like 2, complete sequence Length = 146909 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aattaattaattaacaagaa 43 |||||||||||||||||||| Sbjct: 146090 aattaattaattaacaagaa 146071
>ref|XM_780608.1| PREDICTED: Strongylocentrotus purpuratus similar to Ets translocation variant 1 (ER81 protein) (LOC580556), mRNA Length = 1962 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 caacaacaatggcagcagca 141 |||||||||||||||||||| Sbjct: 828 caacaacaatggcagcagca 847
>emb|BX897674.1| Neurospora crassa DNA linkage group IV BAC clone B2N18 Length = 113778 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gaaggaaaggaaatgaaagg 60 |||||||||||||||||||| Sbjct: 90645 gaaggaaaggaaatgaaagg 90664
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ccgccgcgcgccacgccgacgttg 389 |||||||||||| ||||||||||| Sbjct: 3037652 ccgccgcgcgcctcgccgacgttg 3037675
>emb|AL121800.1|DMBN5I9 Drosophila melanogaster BAC clone BACN5I9 Length = 96433 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 aacaagaaggaaaggaaatgaaag 59 ||||| |||||||||||||||||| Sbjct: 12916 aacaaaaaggaaaggaaatgaaag 12893
>emb|AL929280.6| Mouse DNA sequence from clone RP23-67M20 on chromosome 11 Contains a novel gene (2810471M01Rik), the 5' end of the gene for a novel protein (E030025D05Rik) and a CpG island, complete sequence Length = 216627 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 atggcagcagcacctctagc 149 |||||||||||||||||||| Sbjct: 138480 atggcagcagcacctctagc 138499
>emb|BX571738.12| Zebrafish DNA sequence from clone CH211-64K10 in linkage group 16, complete sequence Length = 141217 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gaaggaaaggaaatgaaagg 60 |||||||||||||||||||| Sbjct: 71180 gaaggaaaggaaatgaaagg 71199
>gb|AC010331.8| Homo sapiens chromosome 19 clone CTD-3001H11, complete sequence Length = 114491 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 aagaaggaaaggaaatgaaa 58 |||||||||||||||||||| Sbjct: 58268 aagaaggaaaggaaatgaaa 58287
>gb|AC087378.6| Homo sapiens chromosome 11, clone RP11-375L11, complete sequence Length = 166379 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 aacaagaaggaaaggaaatgaaag 59 |||||||||||||||||| ||||| Sbjct: 142626 aacaagaaggaaaggaaaggaaag 142603
>gb|AC108480.3| Drosophila melanogaster X BAC RP98-2A13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175996 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 aacaagaaggaaaggaaatgaaag 59 ||||| |||||||||||||||||| Sbjct: 160120 aacaaaaaggaaaggaaatgaaag 160097
>gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome 3 BAC 36I5, partial sequence Length = 65547 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 47657 tcctcgccgtcgccgtcgtc 47676
>gb|AC103870.3| Homo sapiens chromosome 11, clone RP11-702L21, complete sequence Length = 182598 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 aacaagaaggaaaggaaatgaaag 59 |||||||||||||||||| ||||| Sbjct: 131815 aacaagaaggaaaggaaaggaaag 131838
>gb|AF325177.1| Mus musculus BAC470L12 sequence Length = 205602 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 aagtcttataattaattaattaac 38 ||||||| |||||||||||||||| Sbjct: 41780 aagtcttttaattaattaattaac 41757
>dbj|AK045568.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230211E15 product:hypothetical Histidine-rich region containing protein, full insert sequence Length = 2302 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 atggcagcagcacctctagc 149 |||||||||||||||||||| Sbjct: 1366 atggcagcagcacctctagc 1385
>dbj|AK087070.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030025D05 product:weakly similar to DELTA-INTERACTING PROTEIN A (HEPATITIS DELTA ANTIGEN INTERACTING PROTEIN A) [Homo sapiens], full insert sequence Length = 3135 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 atggcagcagcacctctagc 149 |||||||||||||||||||| Sbjct: 1336 atggcagcagcacctctagc 1355
>dbj|AK087049.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030022J11 product:weakly similar to HEPATITIS DELTA ANTIGEN INTERACTING PROTEIN A [Homo sapiens], full insert sequence Length = 3135 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 atggcagcagcacctctagc 149 |||||||||||||||||||| Sbjct: 1336 atggcagcagcacctctagc 1355
>ref|NM_062841.5| Caenorhabditis elegans C30B5.6 (C30B5.6) mRNA, complete cds Length = 1751 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aattaattaattaacaagaa 43 |||||||||||||||||||| Sbjct: 1647 aattaattaattaacaagaa 1628
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ccgccgcgcgccacgccgacgttg 389 |||||||||||| ||||||||||| Sbjct: 2186462 ccgccgcgcgcctcgccgacgttg 2186485
>dbj|AK085366.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630016K01 product:similar to WUGSC:H_NH0481J13.1 PROTEIN [Homo sapiens], full insert sequence Length = 4049 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 atggcagcagcacctctagc 149 |||||||||||||||||||| Sbjct: 167 atggcagcagcacctctagc 186
>emb|AL954715.13| Zebrafish DNA sequence from clone DKEY-23I12, complete sequence Length = 195884 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ttataattaattaattaaca 39 |||||||||||||||||||| Sbjct: 153631 ttataattaattaattaaca 153650
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 27367067 tcctcgccgtcgccgtcgtc 27367086 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taattaattaattaacaaga 42 |||||||||||||||||||| Sbjct: 19522024 taattaattaattaacaaga 19522043
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttataattaattaattaa 37 |||||||||||||||||||| Sbjct: 13464594 tcttataattaattaattaa 13464613
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 19168222 tcctcgccgtcgccgtcgtc 19168241
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 tcgccgtcgccgtcgtcaga 287 |||||||||||||||||||| Sbjct: 27052172 tcgccgtcgccgtcgtcaga 27052191
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 40736659 tcctcgccgtcgccgtcgtc 40736678
>gb|AF259900.1|AF259900 Mycobacterium intracellulare DnaB gene, complete cds Length = 1380 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 cgccgcgcgccacgccgacgttgg 390 ||||||||||||||||| |||||| Sbjct: 607 cgccgcgcgccacgccgccgttgg 584
>gb|AC146149.2| Pan troglodytes BAC clone RP43-37G13 from chromosome 7, complete sequence Length = 197136 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gaaggaaaggaaatgaaagg 60 |||||||||||||||||||| Sbjct: 149863 gaaggaaaggaaatgaaagg 149882
>gb|AC026767.30|AC026767 Mus musculus 7 BAC RP23-328L8 (Roswell Park Cancer Institute Mouse BAC) complete sequence Length = 193167 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ttaattaacaagaaggaaag 49 |||||||||||||||||||| Sbjct: 120301 ttaattaacaagaaggaaag 120320
>dbj|AK173298.1| Mus musculus mRNA for mKIAA1912 protein Length = 5349 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 atggcagcagcacctctagc 149 |||||||||||||||||||| Sbjct: 1410 atggcagcagcacctctagc 1429
>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0052O12 Length = 167881 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 39305 tcctcgccgtcgccgtcgtc 39324
>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete sequence Length = 127210 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 76928 tcctcgccgtcgccgtcgtc 76947
>gb|AF289667.1|AF289667 Mus musculus GTF2IRD1 and CYLN2 genes, complete cds Length = 201605 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 aagtcttataattaattaattaac 38 ||||||| |||||||||||||||| Sbjct: 21376 aagtcttttaattaattaattaac 21399
>gb|AF289666.1|AF289666 Mus musculus GTF2I and GTF2IRD1 genes, partial cds Length = 130665 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 aagtcttataattaattaattaac 38 ||||||| |||||||||||||||| Sbjct: 107735 aagtcttttaattaattaattaac 107758
>gb|AC068831.17| Homo sapiens chromosome 15, clone RP11-2O19, complete sequence Length = 136975 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 tcaccttggccagctgctcc 367 |||||||||||||||||||| Sbjct: 122857 tcaccttggccagctgctcc 122876
>gb|AF500012.1| Lycopersicon esculentum dehydration responsive element binding protein (DREB2) mRNA, complete cds Length = 1238 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 aacaacaacaatggcagcag 139 |||||||||||||||||||| Sbjct: 440 aacaacaacaatggcagcag 459
>gb|AC147034.2| Mus musculus BAC clone RP23-189C2 from chromosome 7, complete sequence Length = 213581 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ttaattaacaagaaggaaag 49 |||||||||||||||||||| Sbjct: 49767 ttaattaacaagaaggaaag 49748
>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0473H04 Length = 155204 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 tcgccgtcgccgtcgtcaga 287 |||||||||||||||||||| Sbjct: 20982 tcgccgtcgccgtcgtcaga 21001
>dbj|AB019228.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCK7 Length = 87090 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 attaattaattaacaagaag 44 |||||||||||||||||||| Sbjct: 40384 attaattaattaacaagaag 40403
>dbj|AK111454.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-C02, full insert sequence Length = 1569 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 1272 tcctcgccgtcgccgtcgtc 1253
>dbj|AK109612.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-G07, full insert sequence Length = 1853 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 1007 tcctcgccgtcgccgtcgtc 988
>dbj|AK100655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111G13, full insert sequence Length = 2663 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 tcgccgtcgccgtcgtcaga 287 |||||||||||||||||||| Sbjct: 855 tcgccgtcgccgtcgtcaga 874
>dbj|AK073197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022B10, full insert sequence Length = 2075 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 128 tcctcgccgtcgccgtcgtc 147
>dbj|AK069017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170D06, full insert sequence Length = 1763 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 889 tcctcgccgtcgccgtcgtc 870
>gb|BT024030.1| Zea mays clone EL01N0422F01 mRNA sequence Length = 2246 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 cgttcctcgccgtcgccgtc 281 |||||||||||||||||||| Sbjct: 108 cgttcctcgccgtcgccgtc 127
>emb|CR933841.5| Zebrafish DNA sequence from clone CH211-178N14 in linkage group 19, complete sequence Length = 44619 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taattaattaattaacaaga 42 |||||||||||||||||||| Sbjct: 24829 taattaattaattaacaaga 24848
>gb|AY106062.1| Zea mays PCO084327 mRNA sequence Length = 1981 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 cgttcctcgccgtcgccgtc 281 |||||||||||||||||||| Sbjct: 128 cgttcctcgccgtcgccgtc 147
>gb|AE003427.3| Drosophila melanogaster chromosome X, section 11 of 74 of the complete sequence Length = 213230 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 aacaagaaggaaaggaaatgaaag 59 ||||| |||||||||||||||||| Sbjct: 44296 aacaaaaaggaaaggaaatgaaag 44319
>gb|AC006075.1|AC006075 Homo sapiens chromosome 16, BAC clone RPCI-11_192K18 , complete sequence Length = 169765 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 aagaaggaaaggaaatgaaa 58 |||||||||||||||||||| Sbjct: 9406 aagaaggaaaggaaatgaaa 9425
>dbj|AP004710.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1429D6, complete sequence Length = 179115 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gaaggaaaggaaatgaaagg 60 |||||||||||||||||||| Sbjct: 148399 gaaggaaaggaaatgaaagg 148380
>gb|AC157571.6| Mus musculus BAC clone RP23-111F7 from chromosome 12, complete sequence Length = 208117 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cttataattaattaattaac 38 |||||||||||||||||||| Sbjct: 15796 cttataattaattaattaac 15815
>gb|AC174598.2| Mus musculus BAC clone RP24-234D9 from chromosome 12, complete sequence Length = 199237 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cttataattaattaattaac 38 |||||||||||||||||||| Sbjct: 123176 cttataattaattaattaac 123157
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 19179498 tcctcgccgtcgccgtcgtc 19179517
>emb|Z66519.2|CEB0334 Caenorhabditis elegans Cosmid B0334, complete sequence Length = 41812 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcttataattaattaattaa 37 |||||||||||||||||||| Sbjct: 1264 tcttataattaattaattaa 1245
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcttataattaattaattaa 37 |||||||||||||||||||| Sbjct: 13544773 tcttataattaattaattaa 13544792
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 27292667 tcctcgccgtcgccgtcgtc 27292686 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taattaattaattaacaaga 42 |||||||||||||||||||| Sbjct: 19448237 taattaattaattaacaaga 19448256
>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144596 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taattaattaattaacaaga 42 |||||||||||||||||||| Sbjct: 54205 taattaattaattaacaaga 54224
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124605 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tcctcgccgtcgccgtcgtc 284 |||||||||||||||||||| Sbjct: 35387 tcctcgccgtcgccgtcgtc 35406
>emb|AL691474.29| Mouse DNA sequence from clone RP23-406D5 on chromosome 4, complete sequence Length = 176652 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gaaggaaaggaaatgaaagg 60 |||||||||||||||||||| Sbjct: 161977 gaaggaaaggaaatgaaagg 161958
>emb|CT025540.12| Mouse DNA sequence from clone RP24-280B23 on chromosome 12, complete sequence Length = 199060 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 aagaaggaaaggaaatgaaa 58 |||||||||||||||||||| Sbjct: 105914 aagaaggaaaggaaatgaaa 105933
>gb|AC153601.6| Mus musculus 6 BAC RP23-405O6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 201911 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 agcaagaatgaatcaagtct 20 |||||||||||||||||||| Sbjct: 187545 agcaagaatgaatcaagtct 187564
>gb|AC127693.4| Mus musculus BAC clone RP23-135G19 from 17, complete sequence Length = 223894 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gaaggaaaggaaatgaaagg 60 |||||||||||||||||||| Sbjct: 136044 gaaggaaaggaaatgaaagg 136063
>dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT04J15, TM0321, complete sequence Length = 127049 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tataattaattaattaacaa 40 |||||||||||||||||||| Sbjct: 122261 tataattaattaattaacaa 122242
>dbj|AP004629.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT07I01b, TM0091b, complete sequence Length = 59720 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 caacaacaatggcagcagca 141 |||||||||||||||||||| Sbjct: 59709 caacaacaatggcagcagca 59690
>gb|AC167419.4| Mus musculus BAC clone RP24-359H20 from chromosome 5, complete sequence Length = 179790 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 aagtcttataattaattaattaac 38 ||||||| |||||||||||||||| Sbjct: 62189 aagtcttttaattaattaattaac 62212
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 catgatggtcaccttggccagctg 363 |||||||||||| ||||||||||| Sbjct: 530330 catgatggtcacattggccagctg 530353
>gb|U05811.1|TRU05811 Trichoderma reesei QM9414 serine/threonine protein kinase (pkt1) gene, complete cds Length = 3183 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ccgtccgtccgtccaccgca 168 |||||||||||||||||||| Sbjct: 2921 ccgtccgtccgtccaccgca 2902 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,277,096 Number of Sequences: 3902068 Number of extensions: 4277096 Number of successful extensions: 252556 Number of sequences better than 10.0: 138 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 249703 Number of HSP's gapped (non-prelim): 2853 length of query: 418 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 396 effective length of database: 17,147,199,772 effective search space: 6790291109712 effective search space used: 6790291109712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)