ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl29c08 |
|---|---|
| Clone Library Name | barley_pub |
>AKA12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor protein 250| kDa) (AKAP 250) (Myasthenia gravis autoantigen gravin) Length = 1781 Score = 34.7 bits (78), Expect = 0.12 Identities = 17/45 (37%), Positives = 26/45 (57%) Frame = -1 Query: 455 SPEAQTPEQQPDGATEASEPASEGGAWEQPAAEQMGTDEPDPSLA 321 S E ++PEQ P+G++ +EP GG P+AE DP++A Sbjct: 6 STEQRSPEQPPEGSSTPAEPEPSGGG---PSAEAAPDTTADPAIA 47
>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)| Length = 3969 Score = 34.7 bits (78), Expect = 0.12 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +2 Query: 116 PASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKT 277 P S SP N+ R R S+ S T +++ S PQ +S+PP P T Sbjct: 514 PISQSPENESNDRRSRRYSVSERSFGSRTTKKLSTLQSAPQQQTSSSPPPPLLT 567
>FGD6_MOUSE (Q69ZL1) FYVE, RhoGEF and PH domain-containing protein 6| Length = 1399 Score = 33.9 bits (76), Expect = 0.20 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = +2 Query: 173 TLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDKTALINNRPMPRKDQVHRCP 352 T P S TS T QP +P+ SAPP +++ +S R +P+K Q H P Sbjct: 434 TQPLSLPKQVTSACTDQPPATCNPEVSAPPIQKESSSS---------RIIPKKPQRHSLP 484 Query: 353 SA 358 +A Sbjct: 485 AA 486
>ATG1_USTMA (Q4P0K0) Serine/threonine-protein kinase ATG1 (EC 2.7.11.1)| (Autophagy-related protein 1) Length = 990 Score = 33.5 bits (75), Expect = 0.26 Identities = 22/74 (29%), Positives = 35/74 (47%) Frame = +2 Query: 65 LQQRYR*HQAPKSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDP 244 L+ R +PK+ G + NK R R TLP ++ + Y+T +P P+D Sbjct: 400 LESRSTQEASPKAITGETIAP---NKTPREDARPPRTLPRAFSAK---YVTGEPPQPEDL 453 Query: 245 KASAPPTPRKTINS 286 + PPT +T +S Sbjct: 454 EKRVPPTMTRTPSS 467
>3BP1_HUMAN (Q9Y3L3) SH3 domain-binding protein 1 (3BP-1)| Length = 701 Score = 33.5 bits (75), Expect = 0.26 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 9/104 (8%) Frame = +2 Query: 92 APKSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPT-- 265 +PK P +A+P +AR R P + +S P+ P P + +P T Sbjct: 544 SPKVTRSPPETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQ 603 Query: 266 --PRKTINSGDKTALI-----NNRPMPRKDQVHRCPSARLQAAP 376 PR+ + S + + P P + Q R P++ A+P Sbjct: 604 ALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASP 647
>104K_THEPA (P15711) 104 kDa microneme-rhoptry antigen precursor (p104)| Length = 924 Score = 33.5 bits (75), Expect = 0.26 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 7/103 (6%) Frame = +2 Query: 89 QAPKSEDGN-----PASASPTNKIARSRDRHLDTLP-NSYQSSNTSYITSQPSVPQDPK- 247 +AP ++G+ P+ S ++K + P ++ S ++ +PS P+DPK Sbjct: 520 KAPGDKEGSEGHKGPSKGSDSSKEGKKPGSGKKPGPAREHKPSKIPTLSKKPSGPKDPKH 579 Query: 248 ASAPPTPRKTINSGDKTALINNRPMPRKDQVHRCPSARLQAAP 376 P PRK + +TA RP P+ Q+ + P + +P Sbjct: 580 PRDPKEPRK--SKSPRTASPTRRPSPKLPQLSKLPKSTSPRSP 620
>TXND3_ANTCR (P90666) Thioredoxin domain-containing protein 3 homolog| (Intermediate chain 1) Length = 837 Score = 32.3 bits (72), Expect = 0.58 Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 2/41 (4%) Frame = -1 Query: 452 PEAQTPEQQPDGATEASEPASEGGAW--EQPAAEQMGTDEP 336 P A++ EQQ +G A+E A+EGG EQP AE G ++P Sbjct: 674 PAAESGEQQAEGGEPATETATEGGEQQAEQPPAE--GGEKP 712
>HRX_MOUSE (P55200) Zinc finger protein HRX (ALL-1) (Fragment)| Length = 3866 Score = 32.3 bits (72), Expect = 0.58 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = +2 Query: 116 PASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTP 268 P S SP N+ R R S+ S T + + S PQ +S+PP P Sbjct: 412 PISQSPENESNDRRSRRYSMSERSFGSRATKKLPTLQSAPQQKTSSSPPPP 462
>ENAH_HUMAN (Q8N8S7) Protein enabled homolog| Length = 591 Score = 32.3 bits (72), Expect = 0.58 Identities = 15/58 (25%), Positives = 30/58 (51%) Frame = +2 Query: 167 LDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDKTALINNRPMPRKDQV 340 ++T + ++ +TS+ S P+ + P R +G K+ +I+ R PRK+Q+ Sbjct: 465 IETEQKEDKGEDSEPVTSKASSTSTPEPTRKPWERTNTMNGSKSPVISRRDSPRKNQI 522
>HXA9_AMBME (P50209) Homeobox protein Hox-A9 (Fragment)| Length = 143 Score = 32.3 bits (72), Expect = 0.58 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 8/69 (11%) Frame = +2 Query: 185 SYQSSNTSYITSQPSVPQDPKASA---PPTPRKTINSGDKTALINNRPM-----PRKDQV 340 ++ SS+T ++ S P D ++S P P +T SGDK A+ N P R + Sbjct: 21 TFDSSHTLSLSDYGSSPADKQSSEGAFPEAPAETEASGDKPAIDPNNPAANWLHARSTRK 80 Query: 341 HRCPSARLQ 367 RCP + Q Sbjct: 81 KRCPYTKHQ 89
>DREB_CHICK (P18302) Drebrin (Developmentally-regulated brain protein)| Length = 651 Score = 32.0 bits (71), Expect = 0.76 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 5/42 (11%) Frame = -1 Query: 440 TPEQQPDGATEASEPASEGGAW-----EQPAAEQMGTDEPDP 330 TP+ P +T+ +EPA+ W E AAE G DEPDP Sbjct: 401 TPKDSPSPSTQVAEPAATEQHWPFPGPEDKAAEPPG-DEPDP 441
>WBS14_HUMAN (Q9NP71) Williams-Beuren syndrome chromosome region 14 protein (WS| basic-helix-loop-helix leucine zipper protein) (WS-bHLH) (Mlx interactor) (MLX-interacting protein-like) Length = 852 Score = 31.6 bits (70), Expect = 0.99 Identities = 17/51 (33%), Positives = 29/51 (56%) Frame = +2 Query: 116 PASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTP 268 PAS++ T+ SR + ++ P SS ++++S +P+DPK PP P Sbjct: 342 PASSAMTHLSGHSRLQARNSCPGPLDSS--AFLSSDFLLPEDPKPRLPPPP 390
>SNX41_NEUCR (Q7SB54) Sorting nexin-41| Length = 604 Score = 30.8 bits (68), Expect = 1.7 Identities = 19/81 (23%), Positives = 31/81 (38%) Frame = +2 Query: 209 YITSQPSVPQDPKASAPPTPRKTINSGDKTALINNRPMPRKDQVHRCPSARLQAAPRXXX 388 Y++S + P PP + SG+ TA I++ P + PSA++ AP Sbjct: 429 YLSSSQQI--QPPRREPPAQHRRDGSGEDTASIDSDFPPTHSDFSQAPSAKI-GAPERTG 485 Query: 389 XXXXXXXXXXXXXXXXVFGPL 451 +FGP+ Sbjct: 486 GSPSHKKAASTSITNKIFGPI 506
>MED15_YEAST (P19659) RNA polymerase II mediator complex subunit 15 (Galactose| metabolism protein 11) (Basal expression activator protein 1) (Autonomous replication regulatory protein 3) (Defective silencing suppressor protein 4) (Ty insertion suppressor Length = 1081 Score = 30.8 bits (68), Expect = 1.7 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Frame = +2 Query: 116 PASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQ----DPKASAPPTPRKTIN 283 P SA+ T + ++ ++ N SNT +TS PS + AS PTPR N Sbjct: 744 PVSAAATPSLNKT----INGKVNGRTKSNTIPVTSIPSTNKKLSISNAASQQPTPRSASN 799 Query: 284 SGDKTALINNRPMPRKDQ 337 + T N P P K Q Sbjct: 800 TAKSTP--NTNPSPLKTQ 815
>RCOR2_MOUSE (Q8C796) REST corepressor 2 (M-CoREST)| Length = 523 Score = 30.4 bits (67), Expect = 2.2 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Frame = +2 Query: 104 EDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQP-SVPQDPKASAPPT 265 +DG PA+ PT + R L + TS TS P SVP P PPT Sbjct: 390 QDGAPAAPVPTEEARRGAPVPATALEEDDEVQITSVSTSVPRSVPPAPPPPPPPT 444
>GRLF1_HUMAN (Q9NRY4) Glucocorticoid receptor DNA-binding factor 1 (Glucocorticoid| receptor repression factor 1) (GRF-1) (Rho GAP p190A) (p190-A) Length = 1513 Score = 30.0 bits (66), Expect = 2.9 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +2 Query: 212 ITSQPSVPQDPKASAPPTPRKTINSGDKTALINNRPMPR 328 +TSQPS PQ P PPTP+ + + L +RP P+ Sbjct: 1467 VTSQPSPPQSP----PPTPQSPMQPLLPSPLHPHRPTPQ 1501
>TAZ_DROME (Q9V6G5) Tafazzin homolog| Length = 378 Score = 30.0 bits (66), Expect = 2.9 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Frame = +2 Query: 119 ASASPTNKIARSRDRHLDTLPNSYQS-SNTSYITSQPSVPQDPKASAPPTPRKTINSGDK 295 A A P + +R + P S Q + + T + S P+D + +PPTP +T+NS Sbjct: 38 AMARPYVQAPEARPVPDERYPGSQQDRKDIATQTVRSSKPKDLRPPSPPTPSQTLNS--- 94 Query: 296 TALINNRPMPRKDQ 337 ++ P P DQ Sbjct: 95 ----SSLPPPMSDQ 104
>WNK1_MOUSE (P83741) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1)| (Protein kinase with no lysine 1) (Protein kinase, lysine-deficient 1) Length = 2377 Score = 30.0 bits (66), Expect = 2.9 Identities = 20/69 (28%), Positives = 27/69 (39%) Frame = +2 Query: 68 QQRYR*HQAPKSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPK 247 + R R H K G A+ +PT R D+ + + QPSVP Sbjct: 51 EYRRRRHTMDKDSRGAAATTTPTEHRFFRRSVICDSNATALELPGLPLSIPQPSVPAVVP 110 Query: 248 ASAPPTPRK 274 SAPP P + Sbjct: 111 QSAPPEPHR 119
>WNK1_RAT (Q9JIH7) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1)| (Protein kinase with no lysine 1) (Protein kinase, lysine-deficient 1) Length = 2126 Score = 30.0 bits (66), Expect = 2.9 Identities = 20/69 (28%), Positives = 27/69 (39%) Frame = +2 Query: 68 QQRYR*HQAPKSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPK 247 + R R H K G A+ +PT R D+ + + QPSVP Sbjct: 51 EYRRRRHTMDKDSRGAAATTTPTEHRFFRRSVICDSNATALELPGLPLSIPQPSVPAVVP 110 Query: 248 ASAPPTPRK 274 SAPP P + Sbjct: 111 QSAPPEPHR 119
>SPTA3_HUMAN (Q8NHX4) Spermatogenesis-associated protein 3 (Testis spermatocyte| apoptosis-related protein 1) (Testis and spermatogenesis cell-related protein 1) Length = 183 Score = 29.6 bits (65), Expect = 3.8 Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 3/76 (3%) Frame = +2 Query: 161 RHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDKTALINNRPMPRKDQV 340 RH D+ S++TS S S PQ P + P ++ + + P P + Sbjct: 13 RHRDSTSQHASSNSTSQQPSPESTPQQPSPESTP-QHSSLETTSRQPAFQALPAPEIRRS 71 Query: 341 HRC---PSARLQAAPR 379 C P A ++AAP+ Sbjct: 72 SCCLLSPDANVKAAPQ 87
>MLF3_YEAST (P32047) Protein MLF3 (Multicopy suppressor of leflunomide| sensitivity 3) Length = 452 Score = 29.6 bits (65), Expect = 3.8 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 3/98 (3%) Frame = +2 Query: 95 PKSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRK 274 P SE + ASP K++RS T P +NT T+ + + + + Sbjct: 175 PSSES---SPASPDLKLSRSHSHSAATRPTLNNINNTGMTTTTSNGEPNSRILRFYSYVD 231 Query: 275 TINSGDKTALINNRPM---PRKDQVHRCPSARLQAAPR 379 +N +K A NN P P K Q + CP ++ P+ Sbjct: 232 MLND-EKLAQANNTPTSRPPMKSQAYSCPFILKRSPPQ 268
>HM30_CAEEL (Q22909) Homeobox protein ceh-30| Length = 299 Score = 29.3 bits (64), Expect = 4.9 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = +2 Query: 119 ASASPTNKIARSRD-RHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDK 295 AS SP NKI+ S R D L S +N+S+ PQ K+ +PR + GD+ Sbjct: 90 ASTSPCNKISSSSSFRISDILEQS--PNNSSHSNDHDPSPQSIKSDFSTSPRASSPGGDR 147
>GTI1_SCHPO (O14367) Gluconate transport inducer 1| Length = 720 Score = 29.3 bits (64), Expect = 4.9 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 9/71 (12%) Frame = +2 Query: 179 PNSYQSSN--TSYITSQPSVPQDPKASAPPTPRKTINSGDKTALINNR-PMPRKD----- 334 P+S+ S +S T P VP+ P +S+P T + N+ +A IN R P R++ Sbjct: 190 PSSFSSLPLVSSKPTGTPFVPKSPPSSSPSTTNVS-NASTSSAPINPRAPQTRRESISST 248 Query: 335 -QVHRCPSARL 364 +H C S+ L Sbjct: 249 SSIHYCSSSSL 259
>GAOX3_ARATH (Q39112) Gibberellin 20 oxidase 3 (EC 1.14.11.-) (Gibberellin C-20| oxidase 3) (GA 20-oxidase 3) Length = 380 Score = 29.3 bits (64), Expect = 4.9 Identities = 13/58 (22%), Positives = 26/58 (44%) Frame = -2 Query: 442 KHRSSSQMVPLKLVSRPVREVPGSSLQPSRWAPMNLILPWHRPIVDQSSFISAIDCFS 269 K + S + KL+++ +P + P P + P P++D + F+S C + Sbjct: 17 KTKEDSSIFDAKLLNQHSHHIPQQFVWPDHEKPSTDVQPLQVPLIDLAGFLSGDSCLA 74
>NLTP_PRUAV (Q9M5X8) Nonspecific lipid-transfer protein precursor (LTP)| (Allergen Pru av 3) Length = 117 Score = 29.3 bits (64), Expect = 4.9 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 5/38 (13%) Frame = +1 Query: 343 SVPICSAAGCSQAPPSLAGSLASV-----APSGCCSGV 441 SVPI A C Q +LA +A V P CC+G+ Sbjct: 20 SVPIAQALTCGQVSSNLAPCIAYVRGGGAVPPACCNGI 57
>ZN553_HUMAN (Q96MX3) Zinc finger protein 553| Length = 618 Score = 28.9 bits (63), Expect = 6.4 Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 13/88 (14%) Frame = +2 Query: 128 SPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPP-TPRKTINSGDKTAL 304 S ++ + R R H++ P + PS P P ++PP TPR +SG+ L Sbjct: 369 SLSSTLLRHRLTHME--PQDFSFPGYPLPALIPSPPPPPLGTSPPLTPRSPSHSGEPFGL 426 Query: 305 INNRPMP------------RKDQVHRCP 352 P P D+ H+CP Sbjct: 427 PGLEPEPGGPQAGEPPPPLAGDKPHKCP 454
>NRG2_HUMAN (O14511) Pro-neuregulin-2, membrane-bound isoform precursor| (Pro-NRG2) [Contains: Neuregulin-2 (NRG-2) (Neural- and thymus-derived activator for ERBB kinases) (NTAK) (Divergent of neuregulin-1) (DON-1)] Length = 850 Score = 28.9 bits (63), Expect = 6.4 Identities = 16/51 (31%), Positives = 28/51 (54%) Frame = +2 Query: 119 ASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPR 271 +S+S + + + S ++ +S SSN S I S+P+ P +P+ P PR Sbjct: 25 SSSSSSERSSSSSSSSSESGSSSRSSSNNSSI-SRPAAPPEPRPQQQPQPR 74
>RS2_HALSA (P57713) 30S ribosomal protein S2P| Length = 249 Score = 28.9 bits (63), Expect = 6.4 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = -1 Query: 446 AQTPEQQPDGATEASEPASEGGAWEQPAAEQ 354 AQT EQ PD TEA EPA E A E +++ Sbjct: 28 AQTDEQTPD--TEADEPAPESTATEDVMSDE 56
>PCX_DROME (P18490) Protein pecanex| Length = 3433 Score = 28.9 bits (63), Expect = 6.4 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = -1 Query: 419 GATEASEPASEGGAWEQPAAEQMGTDEPDP 330 G TEASE S GGA + G D PDP Sbjct: 1784 GTTEASENGSGGGANGNTNSNGTGNDLPDP 1813
>H82_NEIG1 (P11910) Outer membrane protein H.8 precursor| Length = 88 Score = 28.9 bits (63), Expect = 6.4 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = -1 Query: 455 SPEAQTPEQQPDGATEASEPASEGGAWEQPAAEQMGTDEP 336 +P A+ P + A A PA+E A E PAAE T+ P Sbjct: 41 APAAEAPAAE---AAAAEAPAAEAPAAEAPAAEAAATEAP 77
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 28.9 bits (63), Expect = 6.4 Identities = 27/95 (28%), Positives = 39/95 (41%) Frame = +2 Query: 92 APKSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPR 271 AP+ +PA A P+ + DR P++ + + QP+ P P + PR Sbjct: 70 APRPSAPSPAQAGPSQAAPAAGDRAAAPRPSAAPKAPAA---QQPAAPSAPAPAPSQGPR 126 Query: 272 KTINSGDKTALINNRPMPRKDQVHRCPSARLQAAP 376 T G K A RP P + P+A AAP Sbjct: 127 PT--PGPKPA---PRPAPAAPEFTAPPAA--PAAP 154
>RBBP6_HUMAN (Q7Z6E9) Retinoblastoma-binding protein 6 (p53-associated cellular| protein of testis) (Proliferation potential-related protein) (Protein P2P-R) (Retinoblastoma-binding Q protein 1) (Protein RBQ-1) Length = 1792 Score = 28.9 bits (63), Expect = 6.4 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 6/85 (7%) Frame = +2 Query: 101 SEDGNPASASPTNKIARSRDRHLDTLPNS------YQSSNTSYITSQPSVPQDPKASAPP 262 +E GN S S ++K AR+ D+H T +S + T Y T + S + Sbjct: 1435 NEQGNFKSLSQSSKEARTSDKHDSTRASSNKDFTPNRDKKTDYDTREYSSSKRRDEKNEL 1494 Query: 263 TPRKTINSGDKTALINNRPMPRKDQ 337 T RK S +K + + PR+++ Sbjct: 1495 TRRKDSPSRNKDSASGQKNKPREER 1519
>SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150) (Fragment) Length = 1324 Score = 28.9 bits (63), Expect = 6.4 Identities = 19/58 (32%), Positives = 24/58 (41%) Frame = +2 Query: 89 QAPKSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPP 262 +AP G PAS S +DTLP + S T +P P P+ APP Sbjct: 1070 RAPSRTPGPPASQSSP----------VDTLPATQLQQKDSSQTLEPKRPPPPRPVAPP 1117
>D7_XENLA (P13007) Protein D7| Length = 278 Score = 28.9 bits (63), Expect = 6.4 Identities = 17/67 (25%), Positives = 29/67 (43%) Frame = +2 Query: 131 PTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDKTALIN 310 P N + + + + P + SS +Y DP++ PP P++ +G K A N Sbjct: 143 PMNSVMQVKQNQPE--PEPFTSSERNY---------DPRSKEPPNPKQPAVNGYKPATTN 191 Query: 311 NRPMPRK 331 P R+ Sbjct: 192 TNPWCRQ 198
>AB1IP_HUMAN (Q7Z5R6) Amyloid beta A4 precursor protein-binding family B member| 1-interacting protein (APBB1-interacting protein 1) (Rap1-GTP-interacting adapter molecule) (RIAM) (Proline-rich EVH1 ligand 1) (PREL-1) (Proline-rich protein 73) (Retinoic ac Length = 666 Score = 28.9 bits (63), Expect = 6.4 Identities = 12/51 (23%), Positives = 22/51 (43%) Frame = +2 Query: 116 PASASPTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTP 268 P + + + + RH +T + + + + P P PK+S PP P Sbjct: 470 PQATHSVSAVLQEAQRHAETSKDKKPALGNHHDPAVPRAPHAPKSSLPPPP 520
>RIMS2_RAT (Q9JIS1) Regulating synaptic membrane exocytosis protein 2| (Rab3-interacting molecule 2) (RIM 2) Length = 1555 Score = 28.9 bits (63), Expect = 6.4 Identities = 20/65 (30%), Positives = 28/65 (43%) Frame = +2 Query: 185 SYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDKTALINNRPMPRKDQVHRCPSARL 364 SY T Q S PQ +PPTPR++ D+ L R + Q H PS+ + Sbjct: 409 SYSMERTREAQGQSSYPQRTTNHSPPTPRRSPIPLDRPEL--RRADSLRKQHHLDPSSAV 466 Query: 365 QAAPR 379 + R Sbjct: 467 RKTKR 471
>Y311_SHEON (Q8EJZ5) UPF0313 protein SO0311| Length = 786 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = -1 Query: 434 EQQPDGATEASEPASEGGAWEQPAAEQMGTDEPD 333 EQ P A +P + G W P A + TDE D Sbjct: 316 EQNPGCARALFQPHGDRGVWVNPPAWPLNTDEMD 349
>YTFB_ECOLI (P39310) Hypothetical protein ytfB| Length = 212 Score = 28.5 bits (62), Expect = 8.4 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Frame = -1 Query: 440 TPEQQPDG-ATEASEPASEGGAWEQPAAEQMGTDEPDPSL 324 TP+ PD A A EP EG EQP Q +PD + Sbjct: 85 TPQNDPDQVAPVAPEPIQEGQPEEQPQTTQTQPFQPDSGI 124
>GRLF1_RAT (P81128) Glucocorticoid receptor DNA-binding factor 1 (GAP-associated| protein p190) Length = 1513 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -2 Query: 424 QMVPLKLVSRPVREVPGSSLQPSR-WAPMNLILPWH 320 Q P +RP+ E PG++L P + W P++ P H Sbjct: 1430 QQCPFFFYNRPISEPPGAALAPLQPWHPLSPSSPLH 1465
>GA2L1_MOUSE (Q8JZP9) GAS2-like protein 1 (Growth arrest-specific 2-like 1)| Length = 678 Score = 28.5 bits (62), Expect = 8.4 Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 23/121 (19%) Frame = +2 Query: 86 HQAPKSEDG--NPASASPTNKIARSRDRHLDTLPNSYQSSNTSYIT--------SQPSVP 235 H+ P+ G +P SPT R +P S + S+ +T P P Sbjct: 281 HRLPQQRTGTFSPQRGSPTPS-----PRPGSPVPGSERRSSRPEVTPISLRGTKEGPETP 335 Query: 236 QDPKASAPPTPRKTINSGDKTALINNR---PM----------PRKDQVHRCPSARLQAAP 376 P+ PP PR SGD + ++ PM R+++ P++ L A+P Sbjct: 336 LRPRDQLPPLPRSRRYSGDSDSSASSAQSGPMGARSDDSATGSRRERPSHRPTSCLPASP 395 Query: 377 R 379 R Sbjct: 396 R 396
>BSCL2_MOUSE (Q9Z2E9) Seipin (Bernardinelli-Seip congenital lipodystrophy type 2| protein homolog) Length = 383 Score = 28.5 bits (62), Expect = 8.4 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -1 Query: 449 EAQTPEQQPDGATEASEPASEGGAWEQPA 363 E + PE++P E EP + G+WE A Sbjct: 322 EEEKPEKRPLNGEEEQEPEASDGSWEDAA 350
>RPB1_ASHGO (Q75A34) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RNA polymerase II subunit 1) Length = 1745 Score = 28.5 bits (62), Expect = 8.4 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 2/84 (2%) Frame = +2 Query: 92 APKSEDGNPASAS--PTNKIARSRDRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPT 265 +P S +P S S PT+ SY ++ SY + PS + +P + Sbjct: 1658 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1717 Query: 266 PRKTINSGDKTALINNRPMPRKDQ 337 P+ + S + NN +KD+ Sbjct: 1718 PQYSPRSPSYSPSFNNNDKEQKDE 1741
>PACC_ASPOR (Q9HFB3) pH-response transcription factor pacC/RIM101| Length = 662 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Frame = -1 Query: 449 EAQTPEQQPDGATEA--SEPASEGGAWEQPAAEQMGTD 342 E++TPE PDG E +EP S E P + G D Sbjct: 605 ESRTPEAGPDGHMEGVETEPVSHPAKCESPVKPEAGGD 642
>GRIN1_MOUSE (Q3UNH4) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)| Length = 932 Score = 28.5 bits (62), Expect = 8.4 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 4/83 (4%) Frame = +2 Query: 98 KSEDGNPASASPTNKIARSRDRHLDTLPNSYQSSNTSY----ITSQPSVPQDPKASAPPT 265 + DG P S++ + RS + +LP S++TS + P A+ PP Sbjct: 647 RQSDGTPYSSAQPQRDTRS----IGSLPEREPSASTSQKDLAAAAAQKSPSAEAAAPPPG 702 Query: 266 PRKTINSGDKTALINNRPMPRKD 334 PR N + P PR+D Sbjct: 703 PRTRDNFTKAPSWDAGAPPPRED 725
>TLE2_BRARE (O13166) Groucho 2 protein| Length = 761 Score = 28.5 bits (62), Expect = 8.4 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 8/70 (11%) Frame = +2 Query: 86 HQAPKSEDGNPASASPTNKIARSRDRHLDT--LPNSYQSSNTSYITSQPSVPQDPKASAP 259 ++ P + G+PA + P N I + R DT P S SS ++ + + K+S P Sbjct: 260 NEDPATPRGSPAHSPPENGIDKPRPAKKDTPRRPASVASSGSTPSSKTKPPEHNDKSSTP 319 Query: 260 ------PTPR 271 PTPR Sbjct: 320 GLKSKAPTPR 329
>SKI_MOUSE (Q60698) Ski oncogene (C-ski)| Length = 725 Score = 28.5 bits (62), Expect = 8.4 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +2 Query: 176 LPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDKTALINNRPMP 325 LP + S SY + + +V + A APPT +K +NS T +++ P P Sbjct: 394 LPALIRDSFYSYKSFETAVAPNV-ALAPPTQQKVVNSPPCTTVVSRAPEP 442
>YMD5_CAEEL (P34459) Hypothetical protein F54H12.5| Length = 880 Score = 28.5 bits (62), Expect = 8.4 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = +2 Query: 158 DRHLDTLPNSYQSSNTSYITSQPSVPQDPKASAPPTPRKTINSGDKT 298 +R+LD + ++ S N S ++ + + ++P TP TI+S D T Sbjct: 328 NRYLDFIKHAPTSPNNSKDPAKRFIGFNSSGASPTTPETTISSSDST 374
>HEX3_ADEM1 (O10438) Peripentonal hexon-associated protein (Protein IIIA)| Length = 494 Score = 28.5 bits (62), Expect = 8.4 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = -1 Query: 392 SEGGAWEQPAAEQMGTDEPD 333 +E GAW +P AEQ+ +EP+ Sbjct: 411 TEDGAWSRPLAEQVNEEEPN 430 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,720,833 Number of Sequences: 219361 Number of extensions: 1411648 Number of successful extensions: 6341 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 5711 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6314 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
