ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl29c04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
2dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
3dbj|AK110058.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 5e-22
4ref|NM_185803.1| Oryza sativa (japonica cultivar-group), predic... 109 8e-21
5emb|AJ851400.1| Gallus gallus mRNA for hypothetical protein, clo... 44 0.38
6ref|NM_001012568.1| Gallus gallus cleavage stimulation factor, 3... 44 0.38
7emb|AL773558.14| Zebrafish DNA sequence from clone CH211-207M11 ... 44 0.38
8gb|AC005699.9|AC005699 Homo sapiens chromosome 4 clone C0473M13 ... 44 0.38
9gb|AC108442.6| Mus musculus chromosome 8, clone RP23-242M14, com... 42 1.5
10ref|XM_844395.1| PREDICTED: Canis familiaris similar to calcium/... 42 1.5
11emb|CR792456.6| Zebrafish DNA sequence from clone RP71-18A8 in l... 42 1.5
12emb|BX470242.10| Zebrafish DNA sequence from clone CH211-195I24 ... 42 1.5
13gb|AY111179.1| Zea mays CL68545_1 mRNA sequence 42 1.5
14gb|AC167362.2| Mus musculus BAC clone RP23-74P17 from chromosome... 40 5.9
15gb|AC122320.4| Mus musculus BAC clone RP23-315F17 from 14, compl... 40 5.9
16gb|AC121989.2| Mus musculus BAC clone RP24-298C8 from 7, complet... 40 5.9
17ref|NM_018805.2| Mus musculus heparan sulfate (glucosamine) 3-O-... 40 5.9
18emb|AL360000.8| Human DNA sequence from clone RP11-413G15 on chr... 40 5.9
19gb|AC098654.2| Homo sapiens chromosome 1 clone RP11-475O6, compl... 40 5.9
20gb|BC063301.1| Homo sapiens heparan sulfate (glucosamine) 3-O-su... 40 5.9
21emb|AL603889.5| Mouse DNA sequence from clone RP23-407M20 on chr... 40 5.9
22emb|BX901976.22| Zebrafish DNA sequence from clone DKEY-101P20 i... 40 5.9
23emb|BX321910.6| Zebrafish DNA sequence from clone DKEYP-25B4 in ... 40 5.9
24gb|DQ397618.1| Cenarchaeum symbiosum clone C03C07, complete sequ... 40 5.9
25gb|DQ397602.1| Cenarchaeum symbiosum clone C08B03, complete sequ... 40 5.9
26gb|AC092372.3| Homo sapiens chromosome 5 clone RP11-58M12, compl... 40 5.9
27dbj|AK171996.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 5.9
28gb|AC022121.6| Homo sapiens chromosome 5 clone CTD-2007H13, comp... 40 5.9
29dbj|AK029346.1| Mus musculus 0 day neonate head cDNA, RIKEN full... 40 5.9
30gb|AC012624.6| Homo sapiens chromosome 5 clone CTD-2082I17, comp... 40 5.9
31gb|AC026778.4|AC026778 Homo sapiens chromosome 5 clone CTC-428I1... 40 5.9
32dbj|AK076251.1| Mus musculus 0 day neonate skin cDNA, RIKEN full... 40 5.9
33gb|AC022459.6|AC022459 Homo sapiens BAC clone RP11-28I21 from 1,... 40 5.9
34gb|AC022816.15|AC022816 Homo sapiens chromosome 17, clone RP11-6... 40 5.9
35gb|AC104121.3| Homo sapiens chromosome 5 clone RP11-408O10, comp... 40 5.9
36gb|AF542560.1| Marchantia polymorpha PAC pMM2D3 RT region hypoth... 40 5.9
37emb|AL953841.5| Zebrafish DNA sequence from clone DKEY-44G23 in ... 40 5.9
38emb|AL049874.3|CNS0000Q Human chromosome 14 DNA sequence BAC R-1... 40 5.9
39dbj|AP003031.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 5.9
40dbj|AP001496.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 5.9
41emb|AJ296303.1|MMU296303 Mus musculus tub gene for tubby protein... 40 5.9
42emb|AL844181.9| Mouse DNA sequence from clone RP23-128E7 on chro... 40 5.9 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  113 bits (57), Expect = 5e-22
 Identities = 63/65 (96%)
 Strand = Plus / Plus

                                                                           
Query: 375     tgctacagctcgacggagacgtaggtggccgagtagtccggcatccggtgcaggctccgg 434
               ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9379359 tgctacaactcgacggagacgtaggtggcggagtagtccggcatccggtgcaggctccgg 9379418

                    
Query: 435     agcac 439
               |||||
Sbjct: 9379419 agcac 9379423
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>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0038C05
          Length = 152941

 Score =  113 bits (57), Expect = 5e-22
 Identities = 63/65 (96%)
 Strand = Plus / Plus

                                                                          
Query: 375    tgctacagctcgacggagacgtaggtggccgagtagtccggcatccggtgcaggctccgg 434
              ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 107769 tgctacaactcgacggagacgtaggtggcggagtagtccggcatccggtgcaggctccgg 107828

                   
Query: 435    agcac 439
              |||||
Sbjct: 107829 agcac 107833
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>dbj|AK110058.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-D07, full
            insert sequence
          Length = 3271

 Score =  113 bits (57), Expect = 5e-22
 Identities = 63/65 (96%)
 Strand = Plus / Minus

                                                                        
Query: 375  tgctacagctcgacggagacgtaggtggccgagtagtccggcatccggtgcaggctccgg 434
            ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2928 tgctacaactcgacggagacgtaggtggcggagtagtccggcatccggtgcaggctccgg 2869

                 
Query: 435  agcac 439
            |||||
Sbjct: 2868 agcac 2864
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>ref|NM_185803.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2919

 Score =  109 bits (55), Expect = 8e-21
 Identities = 61/63 (96%)
 Strand = Plus / Minus

                                                                        
Query: 377  ctacagctcgacggagacgtaggtggccgagtagtccggcatccggtgcaggctccggag 436
            ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2919 ctacaactcgacggagacgtaggtggcggagtagtccggcatccggtgcaggctccggag 2860

               
Query: 437  cac 439
            |||
Sbjct: 2859 cac 2857
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>emb|AJ851400.1| Gallus gallus mRNA for hypothetical protein, clone 1m7
          Length = 2852

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 74  gcatatgattttgctctggata 95
           ||||||||||||||||||||||
Sbjct: 555 gcatatgattttgctctggata 576
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>ref|NM_001012568.1| Gallus gallus cleavage stimulation factor, 3' pre-RNA, subunit 3,
           77kDa (CSTF3), mRNA
          Length = 2852

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 74  gcatatgattttgctctggata 95
           ||||||||||||||||||||||
Sbjct: 555 gcatatgattttgctctggata 576
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>emb|AL773558.14| Zebrafish DNA sequence from clone CH211-207M11 in linkage group 16,
            complete sequence
          Length = 196875

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 89   ctggatacacacaattttgaag 110
            ||||||||||||||||||||||
Sbjct: 8557 ctggatacacacaattttgaag 8578
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>gb|AC005699.9|AC005699 Homo sapiens chromosome 4 clone C0473M13 map 4p16, complete sequence
          Length = 191904

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 16   tcttaaactgcatctttctcaa 37
            ||||||||||||||||||||||
Sbjct: 2094 tcttaaactgcatctttctcaa 2073
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>gb|AC108442.6| Mus musculus chromosome 8, clone RP23-242M14, complete sequence
          Length = 209618

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 183   ttaattacacctaagaaaaca 203
             |||||||||||||||||||||
Sbjct: 77449 ttaattacacctaagaaaaca 77469
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>ref|XM_844395.1| PREDICTED: Canis familiaris similar to calcium/calmodulin-dependent
           protein kinase ID isoform 2 (LOC607636), mRNA
          Length = 1584

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 287 catctttctctgtgtaaaatc 307
           |||||||||||||||||||||
Sbjct: 442 catctttctctgtgtaaaatc 422
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>emb|CR792456.6| Zebrafish DNA sequence from clone RP71-18A8 in linkage group 24,
             complete sequence
          Length = 84852

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 250   tttagttacattgcatctgca 270
             |||||||||||||||||||||
Sbjct: 66536 tttagttacattgcatctgca 66516
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>emb|BX470242.10| Zebrafish DNA sequence from clone CH211-195I24 in linkage group 16,
             complete sequence
          Length = 114149

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 249   ttttagttacattgcatctgc 269
             |||||||||||||||||||||
Sbjct: 10344 ttttagttacattgcatctgc 10324
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>gb|AY111179.1| Zea mays CL68545_1 mRNA sequence
          Length = 679

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 260 ttgcatctgcaaaattccatt 280
           |||||||||||||||||||||
Sbjct: 145 ttgcatctgcaaaattccatt 165
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>gb|AC167362.2| Mus musculus BAC clone RP23-74P17 from chromosome 7, complete sequence
          Length = 215537

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 190   cacctaagaaaacaaacaggaacg 213
             |||| |||||||||||||||||||
Sbjct: 61073 caccaaagaaaacaaacaggaacg 61096
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>gb|AC122320.4| Mus musculus BAC clone RP23-315F17 from 14, complete sequence
          Length = 197655

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    tacattgcatctgcaaaatt 275
              ||||||||||||||||||||
Sbjct: 130826 tacattgcatctgcaaaatt 130845
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>gb|AC121989.2| Mus musculus BAC clone RP24-298C8 from 7, complete sequence
          Length = 175515

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 190    cacctaagaaaacaaacaggaacg 213
              |||| |||||||||||||||||||
Sbjct: 148150 caccaaagaaaacaaacaggaacg 148173
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>ref|NM_018805.2| Mus musculus heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
            (Hs3st3b1), mRNA
          Length = 6004

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  catctttctctgtgtaaaat 306
            ||||||||||||||||||||
Sbjct: 4834 catctttctctgtgtaaaat 4815
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>emb|AL360000.8| Human DNA sequence from clone RP11-413G15 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 104405

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 97    acacaattttgaagcacatctttc 120
             ||||||||||||| ||||||||||
Sbjct: 83339 acacaattttgaatcacatctttc 83362
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>gb|AC098654.2| Homo sapiens chromosome 1 clone RP11-475O6, complete sequence
          Length = 159975

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 97    acacaattttgaagcacatctttc 120
             ||||||||||||| ||||||||||
Sbjct: 18470 acacaattttgaatcacatctttc 18493
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>gb|BC063301.1| Homo sapiens heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1,
            mRNA (cDNA clone MGC:71688 IMAGE:30343352), complete cds
          Length = 5323

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  catctttctctgtgtaaaat 306
            ||||||||||||||||||||
Sbjct: 5237 catctttctctgtgtaaaat 5218
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>emb|AL603889.5| Mouse DNA sequence from clone RP23-407M20 on chromosome 11, complete
             sequence
          Length = 145052

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   catctttctctgtgtaaaat 306
             ||||||||||||||||||||
Sbjct: 64494 catctttctctgtgtaaaat 64513
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>emb|BX901976.22| Zebrafish DNA sequence from clone DKEY-101P20 in linkage group 22,
             complete sequence
          Length = 201928

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   cttttagttacattgcatct 267
             ||||||||||||||||||||
Sbjct: 25595 cttttagttacattgcatct 25576
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>emb|BX321910.6| Zebrafish DNA sequence from clone DKEYP-25B4 in linkage group 7,
             complete sequence
          Length = 167869

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 251   ttagttacattgcatctgca 270
             ||||||||||||||||||||
Sbjct: 90283 ttagttacattgcatctgca 90302
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>gb|DQ397618.1| Cenarchaeum symbiosum clone C03C07, complete sequence
          Length = 41625

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 248  cttttagttacattgcatctgcaa 271
            ||||||| ||||||||||||||||
Sbjct: 8680 cttttagatacattgcatctgcaa 8657
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>gb|DQ397602.1| Cenarchaeum symbiosum clone C08B03, complete sequence
          Length = 40416

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 248   cttttagttacattgcatctgcaa 271
             ||||||| ||||||||||||||||
Sbjct: 29457 cttttagatacattgcatctgcaa 29434
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>gb|AC092372.3| Homo sapiens chromosome 5 clone RP11-58M12, complete sequence
          Length = 101220

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 97    acacaattttgaagcacatctttc 120
             |||||||||| |||||||||||||
Sbjct: 51325 acacaattttaaagcacatctttc 51348
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>dbj|AK171996.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830028E19 product:heparan sulfate
            (glucosamine) 3-O-sulfotransferase 3B, full insert
            sequence
          Length = 4886

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  catctttctctgtgtaaaat 306
            ||||||||||||||||||||
Sbjct: 4817 catctttctctgtgtaaaat 4798
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>gb|AC022121.6| Homo sapiens chromosome 5 clone CTD-2007H13, complete sequence
          Length = 219258

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 97     acacaattttgaagcacatctttc 120
              |||||||||| |||||||||||||
Sbjct: 113855 acacaattttaaagcacatctttc 113878
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>dbj|AK029346.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched
            library, clone:4833401D16 product:unclassifiable, full
            insert sequence
          Length = 1571

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  catctttctctgtgtaaaat 306
            ||||||||||||||||||||
Sbjct: 1502 catctttctctgtgtaaaat 1483
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>gb|AC012624.6| Homo sapiens chromosome 5 clone CTD-2082I17, complete sequence
          Length = 134365

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 97    acacaattttgaagcacatctttc 120
             |||||||||| |||||||||||||
Sbjct: 93847 acacaattttaaagcacatctttc 93824
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>gb|AC026778.4|AC026778 Homo sapiens chromosome 5 clone CTC-428I11, complete sequence
          Length = 195433

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 97    acacaattttgaagcacatctttc 120
             |||||||||| |||||||||||||
Sbjct: 54111 acacaattttaaagcacatctttc 54134
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>dbj|AK076251.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched
            library, clone:4631422G23 product:unclassifiable, full
            insert sequence
          Length = 3078

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 287  catctttctctgtgtaaaat 306
            ||||||||||||||||||||
Sbjct: 1175 catctttctctgtgtaaaat 1194
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>gb|AC022459.6|AC022459 Homo sapiens BAC clone RP11-28I21 from 1, complete sequence
          Length = 163291

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 97     acacaattttgaagcacatctttc 120
              ||||||||||||| ||||||||||
Sbjct: 125892 acacaattttgaatcacatctttc 125915
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>gb|AC022816.15|AC022816 Homo sapiens chromosome 17, clone RP11-626C5, complete sequence
          Length = 95546

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   catctttctctgtgtaaaat 306
             ||||||||||||||||||||
Sbjct: 92549 catctttctctgtgtaaaat 92568
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>gb|AC104121.3| Homo sapiens chromosome 5 clone RP11-408O10, complete sequence
          Length = 127716

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   cttttagttacattgcatct 267
             ||||||||||||||||||||
Sbjct: 18881 cttttagttacattgcatct 18862
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>gb|AF542560.1| Marchantia polymorpha PAC pMM2D3 RT region hypothetical protein
             (M2D3.6) gene, complete cds
          Length = 25306

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 267   tgcaaaattccattttacct 286
             ||||||||||||||||||||
Sbjct: 19038 tgcaaaattccattttacct 19019
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>emb|AL953841.5| Zebrafish DNA sequence from clone DKEY-44G23 in linkage group 22,
             complete sequence
          Length = 219929

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   cttttagttacattgcatct 267
             ||||||||||||||||||||
Sbjct: 68489 cttttagttacattgcatct 68470
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>emb|AL049874.3|CNS0000Q Human chromosome 14 DNA sequence BAC R-1042B17 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 193047

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   attccattttacctcatctt 292
             ||||||||||||||||||||
Sbjct: 43743 attccattttacctcatctt 43762
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>dbj|AP003031.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-535A19, complete
             sequences
          Length = 95585

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 260   ttgcatctgcaaaattccat 279
             ||||||||||||||||||||
Sbjct: 36407 ttgcatctgcaaaattccat 36388
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>dbj|AP001496.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-835E18, complete
              sequence
          Length = 179358

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    tgtgtaaaatctagttacac 316
              ||||||||||||||||||||
Sbjct: 171984 tgtgtaaaatctagttacac 172003
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>emb|AJ296303.1|MMU296303 Mus musculus tub gene for tubby protein, exons 1-12
          Length = 163455

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 190   cacctaagaaaacaaacaggaacg 213
             |||| |||||||||||||||||||
Sbjct: 70168 caccaaagaaaacaaacaggaacg 70191
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>emb|AL844181.9| Mouse DNA sequence from clone RP23-128E7 on chromosome X, complete
             sequence
          Length = 139178

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   cctaagaaaacaaacaggaa 211
             ||||||||||||||||||||
Sbjct: 36040 cctaagaaaacaaacaggaa 36021


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,132,408
Number of Sequences: 3902068
Number of extensions: 4132408
Number of successful extensions: 84347
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84250
Number of HSP's gapped (non-prelim): 97
length of query: 439
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 417
effective length of database: 17,147,199,772
effective search space: 7150382304924
effective search space used: 7150382304924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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