>COLI1_ONCMY (Q04617) Corticotropin-lipotropin A precursor (Pro-opiomelanocortin|
           A) (POMC A) [Contains: NPP 1; Corticotropin
           (Adrenocorticotropic hormone) (ACTH); Melanotropin alpha
           1 (Alpha-MSH 1); Corticotropin-like intermediary peptide
           1 (CLIP-1); Lipo
          Length = 253

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 179 QNPRCEALHSMNSLFHCIQL 120
           +NPRC  L S N+L  CIQL
Sbjct: 25  ENPRCHDLSSENNLLECIQL 44

>NICN1_CANFA (Q861Y6) Nicolin-1|
          Length = 213

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 29/114 (25%), Positives = 47/114 (41%)
 Frame = +3

Query: 15  VVCLADFCQTTDHNISLKGEEAVVLFQIVLTNRMSQLYTMKQRVHAVQSFATWILVILYT 194
           V CL D+C   D +     +E V LF+  +   M+++  ++ R+   Q    W   + +T
Sbjct: 75  VTCLRDYCLMPDPHSEEGAQEYVSLFKHQMLCDMARV--LELRLILRQPSPLW---LSFT 129

Query: 195 GTCTNIYISAKDKCPCSPSHKLQNWPSLS*APKLTLPLISSKIDPSDTELEIMK 356
                IY     + P SPS     W S     +   PLI    DP+    E+ +
Sbjct: 130 VEELQIY----QQGPKSPSMTFPKWLSHPVPCEQPAPLIEGLPDPNRVSSEVQQ 179

>CETN2_MOUSE (Q9R1K9) Centrin-2 (Caltractin isoform 1)|
          Length = 172

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +3

Query: 300 LPLISSKIDPSDTELEIMKRCTPQESGGNFPVEFSNDKRLARNLADALT 446
           L +++ K+   DT+ EI+K     +      + F N KR+A+ L + LT
Sbjct: 90  LTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLT 138

>CETN2_HUMAN (P41208) Centrin-2 (Caltractin isoform 1)|
          Length = 172

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +3

Query: 300 LPLISSKIDPSDTELEIMKRCTPQESGGNFPVEFSNDKRLARNLADALT 446
           L +++ K+   DT+ EI+K     +      + F N KR+A+ L + LT
Sbjct: 90  LTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLT 138

>EXT2_DROME (Q9Y169) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225) (Protein sister|
           of tout-velu)
          Length = 717

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 19/75 (25%), Positives = 33/75 (44%)
 Frame = +3

Query: 183 ILYTGTCTNIYISAKDKCPCSPSHKLQNWPSLS*APKLTLPLISSKIDPSDTELEIMKRC 362
           +L  G C N+ ++ +  CP S  HK   +P L    K  L   S ++   D    + + C
Sbjct: 282 LLLLGACENLDLTMR--CPLSQHHKSLEYPRLLSRGKFCLLGRSLRMGQPDLVEIMSQHC 339

Query: 363 TPQESGGNFPVEFSN 407
            P  +  N+ + F +
Sbjct: 340 IPVIAVDNYVLPFED 354

>PECR_CAVPO (Q9JIF5) Peroxisomal trans-2-enoyl-CoA reductase (EC 1.3.1.38)|
          Length = 302

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 6/75 (8%)
 Frame = -1

Query: 463 HNACLTVSASARFRANRLSLENSTGKFPPDSCGVHLFIISSSVSEGSILELMR------G 302
           H  C  V AS +F   R + E      PP +      I  +   E  +  LM+      G
Sbjct: 40  HLGCNVVIASRKFDRLRAAAEELKATLPPSNKAEVTPIQCNIRKEEEVNNLMKSTLALYG 99

Query: 301 RVNFGAYEREGQFWS 257
           +++F      GQFWS
Sbjct: 100 KIDFLVNNGGGQFWS 114

>RPB2_ARATH (P38420) DNA-directed RNA polymerase II 135 kDa polypeptide (EC|
            2.7.7.6) (RNA polymerase II subunit 2)
          Length = 1188

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 48   DHNISLKGEEAVVLFQIVLTNRMSQLYTMKQRVHAVQ 158
            DH+ISL+  E  ++ Q++LT     L  +K RV +V+
Sbjct: 897  DHSISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVR 933


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,887,715
Number of Sequences: 219361
Number of extensions: 1385013
Number of successful extensions: 3045
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3039
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)