>CSPG2_RAT (Q9ERB4) Versican core protein precursor (Large fibroblast|
           proteoglycan) (Chondroitin sulfate proteoglycan core
           protein 2) (PG-M) (Glial hyaluronate-binding protein)
           (GHAP) (Fragments)
          Length = 2738

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 19/74 (25%), Positives = 33/74 (44%)
 Frame = +3

Query: 57  QHPSNSTVQLPIPLLDTHTQNTHHLLRISPTLQPSEL*SSSAGQKRGRPCATYSRRIASR 236
           QHP  + + +     ++   + +H+    P +QP+            RP +   R+  S+
Sbjct: 617 QHPLTTLMDIIAKKTESDIDHEYHMTSKPPVMQPT------------RP-SVVERKTTSK 663

Query: 237 PSELATCPSLAGEK 278
           P EL+T P  AG K
Sbjct: 664 PQELSTSPPPAGTK 677

>KRF2_COLLI (O93499) Feather keratin Cos1-2 (F-ker)|
          Length = 100

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = +3

Query: 12  NEPSLN*KHSSQISIQHPSNSTVQLPIPLLDTHTQNT 122
           NEP +    SS I+IQ PS   V LP P+L +  QNT
Sbjct: 22  NEPCVRQCQSSTIAIQ-PSPVVVTLPGPILSSFPQNT 57

>AMGO1_HUMAN (Q86WK6) Amphoterin-induced protein 1 precursor (Alivin-2)|
          Length = 493

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +1

Query: 46  RLASNTPPTQLYSSPSLFLTHTHKTHITSCAFRPPCN 156
           RL +   PT+L    SL L+H H   I+S AF P  N
Sbjct: 75  RLRAEWTPTRLTQLHSLLLSHNHLNFISSEAFSPVPN 111

>AMGO1_MOUSE (Q80ZD8) Amphoterin-induced protein 1 precursor (Alivin-2)|
          Length = 492

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +1

Query: 46  RLASNTPPTQLYSSPSLFLTHTHKTHITSCAFRPPCN 156
           RL +   PT+L +  SL L+H H   I+S AF P  N
Sbjct: 75  RLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPN 111

>AMGO1_RAT (Q80ZD7) Amphoterin-induced protein 1 precursor (Alivin-2)|
          Length = 493

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +1

Query: 46  RLASNTPPTQLYSSPSLFLTHTHKTHITSCAFRPPCN 156
           RL +   PT+L +  SL L+H H   I+S AF P  N
Sbjct: 75  RLKAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPN 111

>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon)
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2167

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
 Frame = +1

Query: 49   LASNTPPTQLYSSPSLFLTHTHKTHITSCAF--RPPCNRPNSRVRRRGKNEGALAQLTHG 222
            ++S+T      +SPS         H+    F  RPP       + RR  +   L    H 
Sbjct: 1964 VSSSTAAAPGATSPSASSASASTRHLQGVEFEMRPP-------LLRRAPSPSLLPASDHK 2016

Query: 223  ESPADRPNSLHAPALPERKI--------NSKTGG 300
             SPA RP+SL  P LP   I        +S TGG
Sbjct: 2017 VSPAPRPSSL--PILPSGPIYPGLFDIRSSPTGG 2048

>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2161

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
 Frame = +1

Query: 82   SSPSLFLTHTHKTHITSCAF--RPPCNRPNSRVRRRGKNEGALAQLTHGESPADRPNSLH 255
            +SPS   + T   H+    F  RPP       + RR  +   L    H  SPA RP+SL 
Sbjct: 1969 TSPSASSSSTSTRHLQGVEFEMRPP-------LLRRAPSPSLLPASEHKVSPAPRPSSL- 2020

Query: 256  APALP 270
             P LP
Sbjct: 2021 -PILP 2024


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,028,337
Number of Sequences: 219361
Number of extensions: 1334070
Number of successful extensions: 3958
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3957
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)