Clone Name | rbastl29c01 |
---|---|
Clone Library Name | barley_pub |
>gb|AY579884.1| Hordeum vulgare AML6 mRNA, complete cds Length = 3269 Score = 686 bits (346), Expect = 0.0 Identities = 362/366 (98%), Gaps = 1/366 (0%) Strand = Plus / Minus Query: 125 tcacctcctgcgcatttcgcccaccttgcaaccgtccgaactctagagttcgtcggcggg 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3132 tcacctcctgcgcatttcgcccaccttgcaaccgtccgaactctagagttcgtcggcggg 3073 Query: 185 gcaaaaacgagggcgcccttgcgcaacttactcacggcgaatcgccagcagaccgtccga 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3072 gcaaaaacgagggcgcccttgcgcaacttactcacggcgaatcgccagcagaccgtccga 3013 Query: 245 actcgctacatgccccagccttgccggagagaaaaataaatagcaaaaccgggggtaatt 304 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 3012 actcgctacatgccccagccttgccggagagaaaaataaatagcaaaactgggggtaatt 2953 Query: 305 tattgcagcttcttcgtcctccagttagtgagccaagatcgagtcatcgccctagaccgc 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2952 tattgcagcttcttcgtcctccagttagtgagccaagatcgagtcatcgccctagaccgc 2893 Query: 365 gttagccctgcggctagagttctccaggttaggcgaggtcgacaggcaagcgtctcctct 424 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2892 gttagccctgcggctagagttctccaggttaggcgaggtcgacaggctcgcgtctcctct 2833 Query: 425 ggtgtccgagctgtggagcggcctgttcctcccggacctaggccggatgttgtt-ccaac 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2832 ggtgtccgagctgtggagcggcctgttcctcccggacctaggccggatgttgttcccaac 2773 Query: 484 agggaa 489 |||||| Sbjct: 2772 agggaa 2767 Score = 184 bits (93), Expect = 2e-43 Identities = 93/93 (100%) Strand = Plus / Minus Query: 10 aaaatgaaccgagtttaaattaaaagcattcaagtcagattagcatccaacacccctcca 69 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3251 aaaatgaaccgagtttaaattaaaagcattcaagtcagattagcatccaacacccctcca 3192 Query: 70 actcaactgtacagctccccatccctcttcttg 102 ||||||||||||||||||||||||||||||||| Sbjct: 3191 actcaactgtacagctccccatccctcttcttg 3159
>gb|AC182351.3| Ateles geoffroyi clone UC1-76C3, complete sequence Length = 212614 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtcatcgc 354 |||||||||||||||||||||||| Sbjct: 143560 agtgagccaagatcgagtcatcgc 143537
>gb|AC130289.11| Homo sapiens chromosome 17, clone RP1-66C13, complete sequence Length = 136599 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtcatcg 353 ||||||||||||||||||||||| Sbjct: 129965 agtgagccaagatcgagtcatcg 129943
>gb|AC005697.1|AC005697 Homo sapiens chromosome 17, clone hRPK.138_P_22, complete sequence Length = 174503 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtcatcg 353 ||||||||||||||||||||||| Sbjct: 40572 agtgagccaagatcgagtcatcg 40550
>emb|AL354047.6|HS66C13 Homo sapiens chromosome 17 from PAC RPCI-1 66C13 map 17p11.2 region D17S842-D17S953, complete sequence Length = 156907 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtcatcg 353 ||||||||||||||||||||||| Sbjct: 129964 agtgagccaagatcgagtcatcg 129942
>emb|CR962134.2| Medicago truncatula chromosome 5 clone mte1-40n1, COMPLETE SEQUENCE Length = 139651 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 agagaaaaataaatagcaaaa 292 ||||||||||||||||||||| Sbjct: 114044 agagaaaaataaatagcaaaa 114024
>emb|AL589723.7| Human DNA sequence from clone RP11-204B7 on chromosome 6 Contains the TPMT gene for thiopurine S-methyltransferase, the gene for a novel protein similar to (TAT-interactive protein, 72-KD; tripartite motif protein TRIM32; zinc-finger protein HT2A), complete sequence Length = 147927 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtcat 351 ||||||||||||||||||||| Sbjct: 6133 agtgagccaagatcgagtcat 6113
>emb|AL355344.20| Human DNA sequence from clone RP11-710A11 on chromosome 10 Contains the 3' end for a novel gene (KIAA1274), the PRF1 gene forperforin 1 (pore forming protein), the 5' end of the ADAMTS14 gene for a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif 14, and one CpG island, complete sequence Length = 149490 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtcat 351 ||||||||||||||||||||| Sbjct: 138920 agtgagccaagatcgagtcat 138940
>dbj|AB076248.1| Mus musculus DNA, BAC clone:No.251,465 Length = 158570 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 aaataaatagcaaaaccgggg 298 ||||||||||||||||||||| Sbjct: 94826 aaataaatagcaaaaccgggg 94846
>gb|AC019118.7| Homo sapiens BAC clone RP11-513H7 from 2, complete sequence Length = 188914 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 330 tagtgagccaagatcgagtca 350 ||||||||||||||||||||| Sbjct: 71930 tagtgagccaagatcgagtca 71950
>gb|AC005805.12| Homo sapiens 12 PAC RP3-473L9 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 113064 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtcat 351 ||||||||||||||||||||| Sbjct: 91129 agtgagccaagatcgagtcat 91149
>gb|U82696.2| Homo sapiens chromosome X clone ICRFXc104-F064, ICRFXc104-G0799, Qc-14E2, Qc-13D8, Qc-7G11, ICRFXc104-E0681, Qc-11C8, Qc-9A9 map q28, complete sequence Length = 161664 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtcat 351 ||||||||||||||||||||| Sbjct: 51750 agtgagccaagatcgagtcat 51730
>gb|AF274855.3| Homo sapiens chromosome X clone RP11-366F6 map q28, complete sequence Length = 200395 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtcat 351 ||||||||||||||||||||| Sbjct: 107904 agtgagccaagatcgagtcat 107884
>gb|AC005619.1|AC005619 Homo sapiens chromosome 19, cosmid R34241, complete sequence Length = 45746 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtcat 351 ||||||||||||||||||||| Sbjct: 27130 agtgagccaagatcgagtcat 27150
>emb|AL021707.2|HS508I15 Human DNA sequence from clone RP3-508I15 on chromosome 22q12-13, complete sequence Length = 131353 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtcat 351 ||||||||||||||||||||| Sbjct: 76211 agtgagccaagatcgagtcat 76191
>emb|AL611963.24| Mouse DNA sequence from clone RP23-79J18 on chromosome 4, complete sequence Length = 222196 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 aaataaatagcaaaaccgggg 298 ||||||||||||||||||||| Sbjct: 15119 aaataaatagcaaaaccgggg 15139
>gb|AC120348.9| Mus musculus chromosome 5, clone RP23-55P22, complete sequence Length = 244565 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 gctagagttctccaggttag 396 |||||||||||||||||||| Sbjct: 3470 gctagagttctccaggttag 3451
>gb|AC161192.12| Mus musculus chromosome 5, clone RP23-382I10, complete sequence Length = 214985 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 gctagagttctccaggttag 396 |||||||||||||||||||| Sbjct: 206658 gctagagttctccaggttag 206639
>gb|AC138641.10| Mus musculus chromosome 5, clone RP23-466K15, complete sequence Length = 175628 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 gctagagttctccaggttag 396 |||||||||||||||||||| Sbjct: 97430 gctagagttctccaggttag 97449
>ref|XM_844312.1| PREDICTED: Canis familiaris similar to Adenylate cyclase type III (Adenylate cyclase, olfactive type) (ATP pyrophosphate-lyase 3) (Adenylyl cyclase 3) (AC-III) (AC3), transcript variant 3 (LOC482994), mRNA Length = 3489 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 tacagctccccatccctcttcttg 102 ||||||||| |||||||||||||| Sbjct: 2750 tacagctcctcatccctcttcttg 2727
>ref|XM_540108.2| PREDICTED: Canis familiaris similar to Adenylate cyclase type III (Adenylate cyclase, olfactive type) (ATP pyrophosphate-lyase 3) (Adenylyl cyclase 3) (AC-III) (AC3), transcript variant 1 (LOC482994), mRNA Length = 3489 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 tacagctccccatccctcttcttg 102 ||||||||| |||||||||||||| Sbjct: 2750 tacagctcctcatccctcttcttg 2727
>ref|XM_853481.1| PREDICTED: Canis familiaris similar to Adenylate cyclase type III (Adenylate cyclase, olfactive type) (ATP pyrophosphate-lyase 3) (Adenylyl cyclase 3) (AC-III) (AC3), transcript variant 4 (LOC482994), mRNA Length = 3156 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 tacagctccccatccctcttcttg 102 ||||||||| |||||||||||||| Sbjct: 2417 tacagctcctcatccctcttcttg 2394
>gb|AC107232.4| Mus musculus chromosome 15, clone RP23-144B2, complete sequence Length = 204292 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 gtacagctccccatccctct 97 |||||||||||||||||||| Sbjct: 65482 gtacagctccccatccctct 65501
>emb|AL683817.11| Human DNA sequence from clone RP11-552E4 on chromosome X Contains the 5'end of the SSX5 gene for synovial sarcoma X breakpoint 5, two ornithine aminotransferase (gyrate atrophy)(OAT) pseudogenes, an SSX5 pseudogene (psiSSX5), a S100 calcium binding protein A11 (calgizzarin) (S100A11) pseudogene, the SSX1 gene for synovial sarcoma X breakpoint 1 and one CpG island, complete sequence Length = 79068 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 50706 agtgagccaagatcgagtca 50687 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 21098 agtgagccaagatcgagtca 21079
>emb|AL669984.1| Human DNA sequence from clone RP11-775I22 on chromosome 6 Contains part of the LAMA2 gene for laminin, alpha 2 (merosin, congenital muscular dystrophy) (LAMM) and a bone morphogenetic protein receptor type IA (BMPR1B) pseudogene, complete sequence Length = 93893 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gagaaaaataaatagcaaaa 292 |||||||||||||||||||| Sbjct: 62663 gagaaaaataaatagcaaaa 62682
>emb|AL512430.14| Human DNA sequence from clone RP11-346C16 on chromosome 6 Contains the 3' part of gene KIAA1028, a pseudogene similar to ribosomal protein S19 (RPS19), a pseudogene similar to protein phosphatases, a ribosomal protein S20 (RPS20) pseudogene and a CpG island, complete sequence Length = 189098 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 60810 agtgagccaagatcgagtca 60791
>emb|AL445237.16| Human DNA sequence from clone RP13-238F13 on chromosome 10 Contains the OAT gene for ornithine aminotransferase (gyrate atrophy), a homeobox protein pseudogene, the 5' end of the LHPP gene for phospholysine phosphohistidine inorganic pyrophosphate phosphatase, a RPS10 (40S ribosomal protein 10) pseudogene and four CpG islands, complete sequence Length = 182955 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 23959 agtgagccaagatcgagtca 23978
>emb|AL358073.24| Human DNA sequence from clone RP11-458I7 on chromosome 1 Contains the 5' end of the ZA20D1 gene for zinc finger, A20 domain containing 1, a ribosomal protein L6 (RPL6) pseudogene, the VPS45A gene for vacuolar protein sorting 45A (yeast), the gene for CK2 interacting protein 1; HQ0024c protein (CKIP-1), a novel gene and a CpG island, complete sequence Length = 188211 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 73682 agtgagccaagatcgagtca 73663
>gb|AC094014.3| Papio anubis clone RP41-371B12, complete sequence Length = 161946 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 49902 agtgagccaagatcgagtca 49921
>emb|AL136313.27| Human DNA sequence from clone RP4-551N11 on chromosome 6, complete sequence Length = 128152 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtcatcgc 354 ||||||||||||||| |||||||| Sbjct: 63430 agtgagccaagatcgcgtcatcgc 63407
>gb|AC130455.2| Homo sapiens chromosome 16 clone CTA-362G6, complete sequence Length = 149490 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 18517 agtgagccaagatcgagtca 18498
>gb|AC112215.3| Homo sapiens chromosome 3 clone RP11-844E22, complete sequence Length = 199310 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 119964 agtgagccaagatcgagtca 119945
>gb|AC105934.3| Homo sapiens chromosome 3 clone RP11-620K19, complete sequence Length = 217029 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 111620 agtgagccaagatcgagtca 111601
>emb|AL021917.4|HS45P21 Human DNA sequence from clone RP1-45P21 on chromosome 6p21.3-22.2 Contains the H4FA gene for H4 histone family member A, a histone H3 pseudogene, the BTN3A2, BTN2A2, BTN3A1, BTN2A3 and BTN3A3 genes for butyrophilins 3A1, 2 and 3 and 2A2 and 3. Contains ESTs, STSs, GSSs and CpG islands, complete sequence Length = 170001 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 73932 agtgagccaagatcgagtca 73913
>emb|AL008721.1|HS390C10 Human DNA sequence from clone CTA-390C10 on chromosome 22q11.21-12.1, complete sequence Length = 114231 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 4641 agtgagccaagatcgagtca 4622
>gb|AC159188.2| Mus musculus BAC clone RP24-247J24 from chromosome 13, complete sequence Length = 197018 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tgcagcttcttcgtcctcca 327 |||||||||||||||||||| Sbjct: 25911 tgcagcttcttcgtcctcca 25892
>gb|AC021593.15| Homo sapiens chromosome 17, clone RP11-153A23, complete sequence Length = 177738 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 151699 agtgagccaagatcgagtca 151680
>gb|AC090559.7| Homo sapiens chromosome 11, clone RP11-750H9, complete sequence Length = 202539 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 172713 agtgagccaagatcgagtca 172732
>dbj|AK124893.1| Homo sapiens cDNA FLJ42903 fis, clone BRHIP3013765 Length = 3721 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 tgccggagagaaaaataaat 285 |||||||||||||||||||| Sbjct: 2309 tgccggagagaaaaataaat 2290
>gb|AC026441.5| Homo sapiens chromosome 5 clone CTD-2280O3, complete sequence Length = 112533 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 aaattaaaagcattcaagtc 45 |||||||||||||||||||| Sbjct: 52908 aaattaaaagcattcaagtc 52889
>gb|AC108211.3| Homo sapiens BAC clone RP11-511I14 from 4, complete sequence Length = 222457 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 20122 agtgagccaagatcgagtca 20103
>gb|AC108861.4| Homo sapiens chromosome 15, clone RP11-1123I8, complete sequence Length = 128450 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 44921 agtgagccaagatcgagtca 44902
>gb|AC046168.12| Homo sapiens chromosome 15, clone RP11-307C19, complete sequence Length = 180484 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 53670 agtgagccaagatcgagtca 53689
>gb|AC104446.2| Homo sapiens chromosome 3 clone RP11-447A21, complete sequence Length = 186734 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 22839 agtgagccaagatcgagtca 22820
>gb|AY032722.1| Homo sapiens CD8 beta chain (CD8B1) gene, exons 8 and 9 and partial cds, alternatively spliced Length = 18900 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 tagtgagccaagatcgagtc 349 |||||||||||||||||||| Sbjct: 8445 tagtgagccaagatcgagtc 8426
>gb|AC106854.5| Homo sapiens chromosome 18, clone CTD-2302G2, complete sequence Length = 116879 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 65263 agtgagccaagatcgagtca 65244
>ref|XM_941162.1| PREDICTED: Homo sapiens FLJ42903 protein (LOC400950), mRNA Length = 3709 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 tgccggagagaaaaataaat 285 |||||||||||||||||||| Sbjct: 2303 tgccggagagaaaaataaat 2284
>ref|XM_376049.2| PREDICTED: Homo sapiens FLJ42903 protein (LOC400950), mRNA Length = 3709 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 tgccggagagaaaaataaat 285 |||||||||||||||||||| Sbjct: 2303 tgccggagagaaaaataaat 2284
>gb|AC010290.7| Homo sapiens chromosome 5 clone CTB-125B20, complete sequence Length = 238472 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 107219 agtgagccaagatcgagtca 107238
>gb|AC008562.5| Homo sapiens chromosome 5 clone CTC-535M15, complete sequence Length = 127259 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gagaaaaataaatagcaaaa 292 |||||||||||||||||||| Sbjct: 60953 gagaaaaataaatagcaaaa 60972
>gb|AC010530.8| Homo sapiens chromosome 16 clone RP11-167P11, complete sequence Length = 193514 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gtgagccaagatcgagtcat 351 |||||||||||||||||||| Sbjct: 17295 gtgagccaagatcgagtcat 17276
>gb|AC024067.4|AC024067 Homo sapiens BAC clone RP11-487K20 from Y, complete sequence Length = 108346 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 7158 agtgagccaagatcgagtca 7177
>gb|AC019215.4|AC019215 Homo sapiens BAC clone RP11-480M18 from 8, complete sequence Length = 192579 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtcatcgc 354 ||||||||||||||| |||||||| Sbjct: 91937 agtgagccaagatcgtgtcatcgc 91960
>gb|AC006983.4|AC006983 Homo sapiens BAC clone RP11-70G12 from Y, complete sequence Length = 180345 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 164970 agtgagccaagatcgagtca 164951
>gb|AC140504.2| Homo sapiens chromosome 16 clone RP11-1021N1, complete sequence Length = 212387 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 195166 agtgagccaagatcgagtca 195147
>gb|AC105285.3| Homo sapiens BAC clone RP11-10K16 from 4, complete sequence Length = 156635 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 133999 agtgagccaagatcgagtca 133980
>gb|AC104654.3| Homo sapiens BAC clone RP11-310J6 from 2, complete sequence Length = 55946 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 tgccggagagaaaaataaat 285 |||||||||||||||||||| Sbjct: 47304 tgccggagagaaaaataaat 47323
>gb|AC112696.4| Homo sapiens BAC clone RP11-444N22 from 2, complete sequence Length = 29545 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 tagtgagccaagatcgagtc 349 |||||||||||||||||||| Sbjct: 8736 tagtgagccaagatcgagtc 8755
>gb|AC010896.15| Homo sapiens BAC clone RP11-499P9 from 2, complete sequence Length = 188780 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 65345 agtgagccaagatcgagtca 65364
>gb|AC091043.12| Homo sapiens chromosome 18, clone RP11-595B24, complete sequence Length = 208310 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 199021 agtgagccaagatcgagtca 199040
>gb|AC138080.4| Homo sapiens chromosome 8, clone RP11-1147M13, complete sequence Length = 164872 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 15624 agtgagccaagatcgagtca 15605
>gb|AC020717.3|AC020717 Homo sapiens BAC clone RP11-451L9 from Xq23, complete sequence Length = 166434 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 agagaaaaataaatagcaaa 291 |||||||||||||||||||| Sbjct: 152428 agagaaaaataaatagcaaa 152409
>gb|AC009283.6| Homo sapiens chromosome 17, clone RP11-390P24, complete sequence Length = 175320 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtcatcgc 354 ||||||||||||||| |||||||| Sbjct: 59024 agtgagccaagatcgtgtcatcgc 59047
>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2 (P1-P2-P3-IR2@) on chromosome Y Length = 4538292 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 4438978 agtgagccaagatcgagtca 4438997 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 1609870 agtgagccaagatcgagtca 1609851
>gb|AC011739.7| Homo sapiens BAC clone RP11-68H19 from 2, complete sequence Length = 171811 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtcatcgc 354 ||||||||||||||| |||||||| Sbjct: 11448 agtgagccaagatcgtgtcatcgc 11471
>gb|AC011372.7| Homo sapiens chromosome 5 clone CTB-108B20, complete sequence Length = 183330 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 49582 agtgagccaagatcgagtca 49563
>gb|AC016648.5|AC016648 Homo sapiens chromosome 5 clone RPCI-1_137K24, complete sequence Length = 123946 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 aaattaaaagcattcaagtc 45 |||||||||||||||||||| Sbjct: 77697 aaattaaaagcattcaagtc 77716
>dbj|BS000112.1| Pan troglodytes chromosome 22 clone:RP43-076J24, map 22, complete sequences Length = 169786 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 104502 agtgagccaagatcgagtca 104521
>gb|AC005782.1|AC005782 Homo sapiens chromosome 19, cosmid R31855, complete sequence Length = 35197 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 8375 agtgagccaagatcgagtca 8356
>gb|U95740.1|HUU95740 Human Chromosome 16 BAC clone CIT987SK-A-362G6, complete sequence Length = 149480 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 130964 agtgagccaagatcgagtca 130983
>gb|AC155244.2| Mus musculus BAC clone RP24-318B2 from 13, complete sequence Length = 198847 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tgcagcttcttcgtcctcca 327 |||||||||||||||||||| Sbjct: 77106 tgcagcttcttcgtcctcca 77125
>gb|AC154406.2| Mus musculus BAC clone RP24-251M20 from 9, complete sequence Length = 169877 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ttaaaagcattcaagtcaga 48 |||||||||||||||||||| Sbjct: 145499 ttaaaagcattcaagtcaga 145518
>emb|AL442638.3|HS570H19 Homo sapiens chromosome 9 BAC RP11-570H19, complete sequence Length = 188247 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 23928 agtgagccaagatcgagtca 23909
>emb|AL449963.2|HS399M15 Homo sapiens chromosome 9 BAC RP11-399M15, complete sequence Length = 213216 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 38904 agtgagccaagatcgagtca 38923
>emb|AL133454.6|CNS01DV5 Human chromosome 14 DNA sequence BAC R-580E16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 165159 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 106045 agtgagccaagatcgagtca 106064
>dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, section 55/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 107804 agtgagccaagatcgagtca 107823
>dbj|AP002008.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-794P6, complete sequences Length = 194973 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 53686 agtgagccaagatcgagtca 53705
>dbj|AP006245.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-139F9, complete sequence Length = 155586 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 86376 agtgagccaagatcgagtca 86357
>emb|AL121992.24|HSDJ680D5 Human DNA sequence from clone RP4-680D5 on chromosome 1p36.13-36.31 Contains the 3' end of the gene for a novel DnaJ domain-containing protein (KIAA0962, FLJ13743, FLJ12468), the AGMAT gene for agmatine ureohydrolase (agmatinase), a novel gene (FLJ34180), a novel pseudogene similar to Mus musculus ethanol induced 6 (Etohi6), a CD24 antigen (small cell lung carcinoma cluster 4 antigen) (CD24) pseudogene, the gene for DNA-damage inducible protein 2 (DDI2), the RSC1A1 gene for regulatory solute carrier protein family 1 member 1 and the 5' end of the gene for a novel RUN and PH domain-containing protein (KIAA0842), complete sequence Length = 170399 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 4144 agtgagccaagatcgagtca 4163
>gb|AC134329.3| Mus musculus BAC clone RP24-310D17 from 10, complete sequence Length = 159173 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 ccaacacccctccaactcaa 75 |||||||||||||||||||| Sbjct: 97298 ccaacacccctccaactcaa 97317
>emb|AL954191.5| Zebrafish DNA sequence from clone CH211-230G14, complete sequence Length = 151595 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ttaaattaaaagcattcaagtcag 47 ||||||||| |||||||||||||| Sbjct: 57863 ttaaattaacagcattcaagtcag 57886
>dbj|AP003041.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-567M21, complete sequence Length = 188172 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 14861 agtgagccaagatcgagtca 14880
>dbj|AP000864.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-674N23, complete sequence Length = 171200 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtcatcgc 354 ||||||||||||||| |||||||| Sbjct: 98903 agtgagccaagatcgcgtcatcgc 98926
>emb|AL845462.6| Mouse DNA sequence from clone RP23-236D15 on chromosome 2, complete sequence Length = 190994 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 agaaaaataaatagcaaaac 293 |||||||||||||||||||| Sbjct: 76708 agaaaaataaatagcaaaac 76727
>gb|AC130457.2| Homo sapiens chromosome 16 clone CTA-381E11, complete sequence Length = 129316 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 109844 agtgagccaagatcgagtca 109825
>gb|M19782.1|PARASAGH P.tetraurelia A-surface antigen gene locus DNA, clone SA4-3 Length = 612 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tttaaattaaaagcattcaa 42 |||||||||||||||||||| Sbjct: 375 tttaaattaaaagcattcaa 356
>dbj|AP000563.1| Homo sapiens genomic DNA, chromosome 21q22.1, clone:PQ8P9, D21S226-AML region, complete sequence Length = 68581 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 29114 agtgagccaagatcgagtca 29133
>dbj|AP000211.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone f43D11-119B8, segment 9/12, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 20792 agtgagccaagatcgagtca 20811
>dbj|AP000079.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region, section 15/19, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 68914 agtgagccaagatcgagtca 68933
>dbj|AP003326.2| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2178H20, complete sequence Length = 90920 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 agtgagccaagatcgagtca 350 |||||||||||||||||||| Sbjct: 64638 agtgagccaagatcgagtca 64657 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,139,076 Number of Sequences: 3902068 Number of extensions: 4139076 Number of successful extensions: 198788 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 198016 Number of HSP's gapped (non-prelim): 772 length of query: 491 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 469 effective length of database: 17,147,199,772 effective search space: 8042036693068 effective search space used: 8042036693068 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)