Clone Name | rbastl29b09 |
---|---|
Clone Library Name | barley_pub |
>CP242_PIG (P79402) Cytochrome P450 2C42 (EC 1.14.14.1) (CYPIIC42) (Fragment)| Length = 327 Score = 31.6 bits (70), Expect = 0.81 Identities = 18/39 (46%), Positives = 23/39 (58%) Frame = -1 Query: 209 EGTTVLESCV*TSVSYSVKLLPSPVLFVVKHFVDISFPF 93 +GTT+L S TSV Y K P+P +F HF+D S F Sbjct: 220 KGTTILTSL--TSVLYDCKAFPNPEVFDPGHFLDESGNF 256
>CR1EA_BACTX (Q57458) Pesticidal crystal protein cry1Ea (Insecticidal| delta-endotoxin CryIE(a)) (Crystaline entomocidal protoxin) (133 kDa crystal protein) Length = 1171 Score = 30.8 bits (68), Expect = 1.4 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Frame = +1 Query: 124 TTNRTGLGSNLTEYETDV*THDS----NTVVPSVLTRIPSCKG 240 T R+ +N+T T V TH S NT+ P ++T+IP KG Sbjct: 430 TLTRSLYNTNITSLPTFVWTHHSATNTNTINPDIITQIPLVKG 472
>SYA_LEGPA (Q5X4B7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 860 Score = 30.8 bits (68), Expect = 1.4 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 3/84 (3%) Frame = -1 Query: 323 AVVEVVKNTDSGGKPCIVLLEHLFA*ESPLQEGILVSTEGT-TVLESCV*TSVSYSVKL- 150 A+ ++ +N D V+ +H+ + + +G+L S EG VL + +V + KL Sbjct: 255 AIAQLGQNIDLNHTSLKVIADHIRSCSFLIVDGVLPSNEGRGYVLRRIIRRAVRHGNKLG 314 Query: 149 LPSPVLF-VVKHFVDISFPFHPTL 81 LPSP F +V+ +D+ +P L Sbjct: 315 LPSPFFFKLVQPLIDVMGDAYPEL 338
>CP2CJ_HUMAN (P33261) Cytochrome P450 2C19 (EC 1.14.13.80) ((R)-limonene| 6-monooxygenase) (EC 1.14.13.48) ((S)-limonene 6-monooxygenase) (EC 1.14.13.49) ((S)-limonene 7-monooxygenase) (CYPIIC19) (P450-11A) (Mephenytoin 4-hydroxylase) (CYPIIC17) (P450-254C Length = 490 Score = 29.3 bits (64), Expect = 4.0 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = -1 Query: 209 EGTTVLESCV*TSVSYSVKLLPSPVLFVVKHFVD 108 +GTT+L S TSV + K P+P +F +HF+D Sbjct: 383 KGTTILTSL--TSVLHDNKEFPNPEMFDPRHFLD 414
>CP239_MOUSE (P56656) Cytochrome P450 2C39 (EC 1.14.14.1) (CYPIIC39)| Length = 490 Score = 28.5 bits (62), Expect = 6.9 Identities = 17/39 (43%), Positives = 23/39 (58%) Frame = -1 Query: 209 EGTTVLESCV*TSVSYSVKLLPSPVLFVVKHFVDISFPF 93 +GTTV+ S TSV + K P+P LF HF+D + F Sbjct: 383 KGTTVVTSL--TSVLHDSKEFPNPELFDPGHFLDANGNF 419
>CP2CI_HUMAN (P33260) Cytochrome P450 2C18 (EC 1.14.14.1) (CYPIIC18)| (P450-6B/29C) Length = 490 Score = 28.1 bits (61), Expect = 9.0 Identities = 16/39 (41%), Positives = 24/39 (61%) Frame = -1 Query: 209 EGTTVLESCV*TSVSYSVKLLPSPVLFVVKHFVDISFPF 93 +GTT++ S TSV ++ K P+P +F HF+D S F Sbjct: 383 KGTTIITSL--TSVLHNDKEFPNPEMFDPGHFLDKSGNF 419 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,920,068 Number of Sequences: 219361 Number of extensions: 977371 Number of successful extensions: 2337 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2308 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2336 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)