>LYAM3_SHEEP (P98109) P-selectin precursor (Granule membrane protein 140)|
           (GMP-140) (PADGEM) (Leukocyte-endothelial cell adhesion
           molecule 3) (LECAM3) (CD62P antigen)
          Length = 769

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 10/62 (16%)
 Frame = +2

Query: 296 AKNSPG*RSPNQKCAYHH------PEKWI--PCSYP--LLCHRVSGEGMSCSYQLFCLRV 445
           A N P  +  NQ C   +      P KW   PC      LC+R S + MSCS Q  C+  
Sbjct: 118 ADNEPNNKKNNQDCVEIYIKSPSAPGKWNDEPCGKRKRALCYRASCQDMSCSKQGECIET 177

Query: 446 SG 451
            G
Sbjct: 178 IG 179

>PALF_KLULA (Q6CTM7) pH-response regulator protein palF/RIM8|
          Length = 572

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
 Frame = +3

Query: 210 HLISHIEELFGMVNWWVCMHLHE------ICCSHWQRTLQVDVHQI--KSVHTIILRS 359
           +L+S I+   G + +WV   LH        C  H+Q  + +DV Q+   ++ T++L+S
Sbjct: 148 NLVSSIDFKKGSIRYWVQAELHAQKTPPIFCKQHYQLIVPIDVGQLPKPNIKTVVLQS 205

>LYAM3_BOVIN (P42201) P-selectin precursor (Granule membrane protein 140)|
           (GMP-140) (PADGEM) (Leukocyte-endothelial cell adhesion
           molecule 3) (LECAM3) (CD62P antigen)
          Length = 646

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 10/62 (16%)
 Frame = +2

Query: 296 AKNSPG*RSPNQKCAYHH------PEKWI--PC--SYPLLCHRVSGEGMSCSYQLFCLRV 445
           A N P  +  NQ C   +      P KW   PC      LC+R S + MSCS Q  C+  
Sbjct: 118 ADNEPNNKRNNQDCVEIYIKSLSAPGKWNDEPCWKRKRALCYRASCQDMSCSKQGECIET 177

Query: 446 SG 451
            G
Sbjct: 178 IG 179

>NORM_XYLFT (Q879Z5) Probable multidrug resistance protein norM|
           (Multidrug-efflux transporter)
          Length = 469

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = +2

Query: 347 HPEKWIPCSYPL-LCHRVSGEGMSCSYQLFCLRVSG--VVMPCSYRL 478
           H  +W   ++PL  C R   EGM C++    L   G  V++P SY L
Sbjct: 153 HVVRWGSLAFPLYFCMRYFCEGMHCTFPTMLLGFGGLLVLVPLSYAL 199

>NORM_XYLFA (Q9PA34) Probable multidrug resistance protein norM|
           (Multidrug-efflux transporter)
          Length = 469

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = +2

Query: 347 HPEKWIPCSYPL-LCHRVSGEGMSCSYQLFCLRVSG--VVMPCSYRL 478
           H  +W   ++PL  C R   EGM C++    L   G  V++P SY L
Sbjct: 153 HVVRWGSLAFPLYFCMRYFCEGMHCTFPTMLLGFGGLLVLVPLSYAL 199

>PYRG_HELPJ (Q9ZM99) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP|
           synthetase)
          Length = 538

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -1

Query: 287 ATDFMQMHTHPPVYHPKQLLNMRDQVMDSNKRSNVETNTYFIGGGMHVG*FNCLLL*H-L 111
           +T+F Q   +P VY       + +  MD N +  V T    +GG M +G + C ++ + L
Sbjct: 400 STEFNQRCEYPVVY-------LIEDFMDQNHQKQVRTYNSPLGGTMRLGEYECEIMPNSL 452

Query: 110 FRKGY 96
             K Y
Sbjct: 453 LEKAY 457

>MORG1_BRARE (Q6DH44) Mitogen-activated protein kinase organizer 1 (MAPK|
           organizer 1)
          Length = 315

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -1

Query: 386 TRVDMNMVSTSQDDGMHTFDLVNVNLESSLPMAATDFMQMHTHPPVYHPKQLLNMRDQV 210
           T  D +++S S+D  ++ +DLV  +L   LP+       +  HP    P+ L +M  +V
Sbjct: 244 TDKDTHVLSCSEDGHVYYWDLVEGSLTLKLPVGKAVVQSLSFHPT--EPRLLTSMEGRV 300

>LYAM3_MOUSE (Q01102) P-selectin precursor (Granule membrane protein 140)|
           (GMP-140) (PADGEM) (Leukocyte-endothelial cell adhesion
           molecule 3) (LECAM3) (CD62P antigen)
          Length = 768

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 10/73 (13%)
 Frame = +2

Query: 296 AKNSPG*RSPNQKCAYHH------PEKWI--PC--SYPLLCHRVSGEGMSCSYQLFCLRV 445
           A N P  +  NQ C   +      P KW   PC      LC+  S + MSCS Q  C+  
Sbjct: 118 ADNEPNNKKNNQDCVEIYIKSNSAPGKWNDEPCFKRKRALCYTASCQDMSCSNQGECIET 177

Query: 446 SGVVMPCSYRLPC 484
            G     SY   C
Sbjct: 178 IG-----SYTCSC 185


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,645,442
Number of Sequences: 219361
Number of extensions: 1649249
Number of successful extensions: 3747
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3745
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)