ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl29b02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC015994.13| Homo sapiens, clone RP11-328A22, complete sequence 46 0.10
2gb|AC087487.14| Homo sapiens chromosome 15, clone RP11-698F12, c... 46 0.10
3ref|NM_011721.2| Mus musculus Werner syndrome homolog (human) (W... 42 1.6
4gb|AC147896.2| Xenopus tropicalis clone CH216-45L11, complete se... 42 1.6
5ref|XM_986059.1| PREDICTED: Mus musculus Werner syndrome homolog... 42 1.6
6gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca co... 42 1.6
7gb|AC004381.1|HUAC004381 Homo sapiens Chromosome 16 BAC clone CI... 42 1.6
8gb|BC060700.1| Mus musculus Werner syndrome homolog (human), mRN... 42 1.6
9gb|BC050921.1| Mus musculus Werner syndrome homolog (human), mRN... 42 1.6
10gb|AC153789.11| Mus musculus chromosome 8, clone RP23-466N7, com... 42 1.6
11gb|AC119425.2| Homo sapiens chromosome 1 clone RP11-456A2, compl... 42 1.6
12gb|AC020926.8| Homo sapiens chromosome 16 clone CTD-2152G12, com... 42 1.6
13dbj|AK162801.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 42 1.6
14dbj|AK052466.1| Mus musculus 13 days embryo lung cDNA, RIKEN ful... 42 1.6
15gb|AF241636.1|AF241636 Mus musculus WRN protein (Wrn) mRNA, comp... 42 1.6
16gb|AF091215.1|AF091215 Mus musculus Wrn protein (Wrn) mRNA, comp... 42 1.6
17ref|XM_526012.1| PREDICTED: Pan troglodytes parathyroid hormone ... 40 6.4
18ref|NM_005048.2| Homo sapiens parathyroid hormone receptor 2 (PT... 40 6.4
19gb|BT019441.1| Synthetic construct Homo sapiens parathyroid horm... 40 6.4
20gb|AF238378.5| Homo sapiens chromosome 8 clone SCb-561b17 map p2... 40 6.4
21gb|AF228730.8| Homo sapiens chromosome 8 clones SCb-332a23, CTB-... 40 6.4
22gb|AY497546.1| Homo sapiens parathyroid hormone receptor 2 precu... 40 6.4
23emb|CR450764.3| Zebrafish DNA sequence from clone CH211-209F22 i... 40 6.4
24emb|CR693104.2|CNS0FXR0 Tetraodon nigroviridis full-length cDNA 40 6.4
25emb|CR693097.2|CNS0FXQT Tetraodon nigroviridis full-length cDNA 40 6.4
26emb|CR692814.2|CNS0FXIY Tetraodon nigroviridis full-length cDNA 40 6.4
27emb|CR688758.1|CNS0FUEA Tetraodon nigroviridis full-length cDNA 40 6.4
28gb|AC146224.2| Pan troglodytes BAC clone RP43-27B20 from 7, comp... 40 6.4
29emb|AL603844.7| Human DNA sequence from clone RP11-541I21 on chr... 40 6.4
30emb|AL592504.6| Human DNA sequence from clone RP11-320J16 on chr... 40 6.4
31gb|DQ366737.1| Uncultured Prochlorococcus marinus clone HOT0M-5C... 40 6.4
32emb|AL390023.8| Human DNA sequence from clone RP5-926E3 on chrom... 40 6.4
33emb|BX000700.38| Zebrafish DNA sequence from clone DKEY-27D5 in ... 40 6.4
34emb|BX470258.4| Zebrafish DNA sequence from clone CH211-278L13 i... 40 6.4
35gb|AC161106.13| Medicago truncatula clone mth2-168f23, complete ... 40 6.4
36gb|AC099336.2| Homo sapiens chromosome 1 clone RP11-175B9, compl... 40 6.4
37gb|AF019884.1|AF019884 Dirofilaria immitis beta-tubulin (tub) mR... 40 6.4
38gb|AC024067.4|AC024067 Homo sapiens BAC clone RP11-487K20 from Y... 40 6.4
39gb|AC006983.4|AC006983 Homo sapiens BAC clone RP11-70G12 from Y,... 40 6.4
40emb|BX469912.5| Zebrafish DNA sequence from clone CH211-156L18 i... 40 6.4
41gb|AF324892.1|AF324889S4 Homo sapiens myosin phosphatase target ... 40 6.4
42gb|AC079374.4|AC079374 Arabidopsis thaliana chromosome 1 BAC F4F... 40 6.4
43gb|AC012362.7| Homo sapiens BAC clone RP11-404D15 from 2, comple... 40 6.4
44gb|AC015973.2|AC015973 Homo sapiens BAC clone RP11-366C6 from Y,... 40 6.4
45ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P... 40 6.4
46gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana... 40 6.4
47gb|AY891158.1| Synthetic construct Homo sapiens clone FLH009003.... 40 6.4
48gb|BC036811.1| Homo sapiens parathyroid hormone receptor 2, mRNA... 40 6.4
49emb|CR931725.6| Zebrafish DNA sequence from clone DKEY-22M10 in ... 40 6.4
50emb|CR450709.12| Zebrafish DNA sequence from clone CH211-249J24 ... 40 6.4
51dbj|AP000797.6| Homo sapiens genomic DNA, chromosome 11 clone:CM... 40 6.4
52dbj|AP002991.3| Homo sapiens genomic DNA, chromosome 11 clone:CT... 40 6.4
53gb|U25128.1|HSU25128 Human PTH2 parathyroid hormone receptor mRN... 40 6.4
54emb|CT476806.2| Pan troglodytes chromosome X BAC RP43-032D14, co... 40 6.4
55gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genom... 40 6.4 
>gb|AC015994.13| Homo sapiens, clone RP11-328A22, complete sequence
          Length = 163186

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 42     acaaaaaatattgtaggacaaca 64
              |||||||||||||||||||||||
Sbjct: 157277 acaaaaaatattgtaggacaaca 157255
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>gb|AC087487.14| Homo sapiens chromosome 15, clone RP11-698F12, complete sequence
          Length = 180232

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 42     acaaaaaatattgtaggacaaca 64
              |||||||||||||||||||||||
Sbjct: 109514 acaaaaaatattgtaggacaaca 109536
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>ref|NM_011721.2| Mus musculus Werner syndrome homolog (human) (Wrn), mRNA
          Length = 6476

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  caaagaattaaaaaactgaaa 128
            |||||||||||||||||||||
Sbjct: 5133 caaagaattaaaaaactgaaa 5153
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>gb|AC147896.2| Xenopus tropicalis clone CH216-45L11, complete sequence
          Length = 174902

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 106    ggcaaagaattaaaaaactga 126
              |||||||||||||||||||||
Sbjct: 119173 ggcaaagaattaaaaaactga 119193
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>ref|XM_986059.1| PREDICTED: Mus musculus Werner syndrome homolog (human), transcript
            variant 3 (Wrn), mRNA
          Length = 4943

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  caaagaattaaaaaactgaaa 128
            |||||||||||||||||||||
Sbjct: 4917 caaagaattaaaaaactgaaa 4937
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>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete
            genome
          Length = 686194

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 288  agctaaccaatattcttcagcaaat 312
            ||||||| |||||||||||||||||
Sbjct: 1880 agctaactaatattcttcagcaaat 1904
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>gb|AC004381.1|HUAC004381 Homo sapiens Chromosome 16 BAC clone CIT987SK-44M2, complete sequence
          Length = 213541

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 229   tccaatgcaatatcactatca 249
             |||||||||||||||||||||
Sbjct: 55601 tccaatgcaatatcactatca 55581
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>gb|BC060700.1| Mus musculus Werner syndrome homolog (human), mRNA (cDNA clone
            MGC:67010 IMAGE:6408901), complete cds
          Length = 5037

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  caaagaattaaaaaactgaaa 128
            |||||||||||||||||||||
Sbjct: 4993 caaagaattaaaaaactgaaa 5013
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>gb|BC050921.1| Mus musculus Werner syndrome homolog (human), mRNA (cDNA clone
            MGC:63319 IMAGE:6408901), complete cds
          Length = 5037

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  caaagaattaaaaaactgaaa 128
            |||||||||||||||||||||
Sbjct: 4993 caaagaattaaaaaactgaaa 5013
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>gb|AC153789.11| Mus musculus chromosome 8, clone RP23-466N7, complete sequence
          Length = 187150

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 108   caaagaattaaaaaactgaaa 128
             |||||||||||||||||||||
Sbjct: 95613 caaagaattaaaaaactgaaa 95633
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>gb|AC119425.2| Homo sapiens chromosome 1 clone RP11-456A2, complete sequence
          Length = 29405

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 310   aatggcactaatatcacaaaa 330
             |||||||||||||||||||||
Sbjct: 12272 aatggcactaatatcacaaaa 12292
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>gb|AC020926.8| Homo sapiens chromosome 16 clone CTD-2152G12, complete sequence
          Length = 93288

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 229   tccaatgcaatatcactatca 249
             |||||||||||||||||||||
Sbjct: 74735 tccaatgcaatatcactatca 74715
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>dbj|AK162801.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130082D09 product:Werner
           syndrome homolog (human), full insert sequence
          Length = 1413

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 108 caaagaattaaaaaactgaaa 128
           |||||||||||||||||||||
Sbjct: 78  caaagaattaaaaaactgaaa 98
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>dbj|AK052466.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched
            library, clone:D430030G21 product:Werner syndrome homolog
            (human), full insert sequence
          Length = 2774

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  caaagaattaaaaaactgaaa 128
            |||||||||||||||||||||
Sbjct: 1941 caaagaattaaaaaactgaaa 1961
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>gb|AF241636.1|AF241636 Mus musculus WRN protein (Wrn) mRNA, complete cds
          Length = 6476

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  caaagaattaaaaaactgaaa 128
            |||||||||||||||||||||
Sbjct: 5133 caaagaattaaaaaactgaaa 5153
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>gb|AF091215.1|AF091215 Mus musculus Wrn protein (Wrn) mRNA, complete cds
          Length = 5050

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  caaagaattaaaaaactgaaa 128
            |||||||||||||||||||||
Sbjct: 5002 caaagaattaaaaaactgaaa 5022
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>ref|XM_526012.1| PREDICTED: Pan troglodytes parathyroid hormone receptor 2
           (LOC470631), mRNA
          Length = 1902

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 412 aaggtaattgtttccctgaa 431
           ||||||||||||||||||||
Sbjct: 470 aaggtaattgtttccctgaa 489
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>ref|NM_005048.2| Homo sapiens parathyroid hormone receptor 2 (PTHR2), mRNA
          Length = 2810

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 412 aaggtaattgtttccctgaa 431
           ||||||||||||||||||||
Sbjct: 392 aaggtaattgtttccctgaa 411
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>gb|BT019441.1| Synthetic construct Homo sapiens parathyroid hormone receptor 2
           mRNA, partial cds
          Length = 1653

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 412 aaggtaattgtttccctgaa 431
           ||||||||||||||||||||
Sbjct: 179 aaggtaattgtttccctgaa 198
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>gb|AF238378.5| Homo sapiens chromosome 8 clone SCb-561b17 map p23.1, complete sequence
          Length = 128544

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 107   gcaaagaattaaaaaactgaaacacata 134
             ||||||||  ||||||||||||||||||
Sbjct: 84330 gcaaagaaagaaaaaactgaaacacata 84303
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>gb|AF228730.8| Homo sapiens chromosome 8 clones SCb-332a23, CTB-415D8 map p23.1,
             complete sequences
          Length = 295854

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 107   gcaaagaattaaaaaactgaaacacata 134
             ||||||||  ||||||||||||||||||
Sbjct: 20195 gcaaagaaagaaaaaactgaaacacata 20168
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>gb|AY497546.1| Homo sapiens parathyroid hormone receptor 2 precursor (PTHR2) mRNA,
           complete cds
          Length = 1653

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 412 aaggtaattgtttccctgaa 431
           ||||||||||||||||||||
Sbjct: 179 aaggtaattgtttccctgaa 198
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>emb|CR450764.3| Zebrafish DNA sequence from clone CH211-209F22 in linkage group 11,
             complete sequence
          Length = 152815

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 117   aaaaaactgaaacacataatgaag 140
             ||||||||| ||||||||||||||
Sbjct: 33003 aaaaaactgtaacacataatgaag 32980
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>emb|CR693104.2|CNS0FXR0 Tetraodon nigroviridis full-length cDNA
          Length = 1251

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 25  taccataaatcaaagttacaaaaa 48
           |||||||||| |||||||||||||
Sbjct: 880 taccataaataaaagttacaaaaa 857
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>emb|CR693097.2|CNS0FXQT Tetraodon nigroviridis full-length cDNA
          Length = 1253

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 25  taccataaatcaaagttacaaaaa 48
           |||||||||| |||||||||||||
Sbjct: 888 taccataaataaaagttacaaaaa 865
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>emb|CR692814.2|CNS0FXIY Tetraodon nigroviridis full-length cDNA
          Length = 1253

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 25  taccataaatcaaagttacaaaaa 48
           |||||||||| |||||||||||||
Sbjct: 880 taccataaataaaagttacaaaaa 857
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>emb|CR688758.1|CNS0FUEA Tetraodon nigroviridis full-length cDNA
          Length = 1225

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 25  taccataaatcaaagttacaaaaa 48
           |||||||||| |||||||||||||
Sbjct: 866 taccataaataaaagttacaaaaa 843
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>gb|AC146224.2| Pan troglodytes BAC clone RP43-27B20 from 7, complete sequence
          Length = 141824

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ggcaaagaattaaaaaactg 125
             ||||||||||||||||||||
Sbjct: 24213 ggcaaagaattaaaaaactg 24232
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>emb|AL603844.7| Human DNA sequence from clone RP11-541I21 on chromosome 1, complete
              sequence
          Length = 220185

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 376    aatcttaagaaaacacttgg 395
              ||||||||||||||||||||
Sbjct: 110658 aatcttaagaaaacacttgg 110677
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>emb|AL592504.6| Human DNA sequence from clone RP11-320J16 on chromosome X Contains part
             of a novel gene, complete sequence
          Length = 173828

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   caatattcttcagcaaatgg 314
             ||||||||||||||||||||
Sbjct: 57276 caatattcttcagcaaatgg 57295
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>gb|DQ366737.1| Uncultured Prochlorococcus marinus clone HOT0M-5C8 genomic sequence
          Length = 20051

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   cggcaaagaattaaaaaact 124
             ||||||||||||||||||||
Sbjct: 11916 cggcaaagaattaaaaaact 11897
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>emb|AL390023.8| Human DNA sequence from clone RP5-926E3 on chromosome 1p32.3-34.1
              Contains part of the gene for a novel protein and a
              pseudogene similar to part of ribosomal protein S11
              (RPS11), complete sequence
          Length = 131237

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    aaaaaactgaaacacataat 136
              ||||||||||||||||||||
Sbjct: 114042 aaaaaactgaaacacataat 114023
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>emb|BX000700.38| Zebrafish DNA sequence from clone DKEY-27D5 in linkage group 11, complete
              sequence
          Length = 223355

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 117    aaaaaactgaaacacataatgaag 140
              ||||||||| ||||||||||||||
Sbjct: 217040 aaaaaactgtaacacataatgaag 217017



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 117    aaaaaactgaaacacataatgaag 140
              ||||||||| ||||||||||||||
Sbjct: 140480 aaaaaactgtaacacataatgaag 140457



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 117    aaaaaactgaaacacataatgaag 140
              ||||||||| ||||||||||||||
Sbjct: 120412 aaaaaactgtaacacataatgaag 120389



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 117   aaaaaactgaaacacataatgaag 140
             ||||||||| ||||||||||||||
Sbjct: 85882 aaaaaactgtaacacataatgaag 85859



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 117  aaaaaactgaaacacataatgaag 140
            ||||||||| ||||||||||||||
Sbjct: 2476 aaaaaactgtaacacataatgaag 2453
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>emb|BX470258.4| Zebrafish DNA sequence from clone CH211-278L13 in linkage group 15,
              complete sequence
          Length = 184626

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 117    aaaaaactgaaacacataatgaag 140
              ||||||||| ||||||||||||||
Sbjct: 159837 aaaaaactgtaacacataatgaag 159814



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 117   aaaaaactgaaacacataatgaag 140
             ||||||||| ||||||||||||||
Sbjct: 92330 aaaaaactgtaacacataatgaag 92307



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 117   aaaaaactgaaacacataatgaag 140
             ||||||||| ||||||||||||||
Sbjct: 67641 aaaaaactgtaacacataatgaag 67618
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>gb|AC161106.13| Medicago truncatula clone mth2-168f23, complete sequence
          Length = 94766

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   agtactgcaccttcaaccac 216
             ||||||||||||||||||||
Sbjct: 46526 agtactgcaccttcaaccac 46507
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>gb|AC099336.2| Homo sapiens chromosome 1 clone RP11-175B9, complete sequence
          Length = 159838

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ggcaaagaattaaaaaactg 125
             ||||||||||||||||||||
Sbjct: 65505 ggcaaagaattaaaaaactg 65524
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>gb|AF019884.1|AF019884 Dirofilaria immitis beta-tubulin (tub) mRNA, complete cds
          Length = 1450

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 111  agaattaaaaaactgaaaca 130
            ||||||||||||||||||||
Sbjct: 1419 agaattaaaaaactgaaaca 1400
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>gb|AC024067.4|AC024067 Homo sapiens BAC clone RP11-487K20 from Y, complete sequence
          Length = 108346

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   ggcaaagaattaaaaaactg 125
             ||||||||||||||||||||
Sbjct: 36118 ggcaaagaattaaaaaactg 36099
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>gb|AC006983.4|AC006983 Homo sapiens BAC clone RP11-70G12 from Y, complete sequence
          Length = 180345

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    ggcaaagaattaaaaaactg 125
              ||||||||||||||||||||
Sbjct: 136010 ggcaaagaattaaaaaactg 136029
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>emb|BX469912.5| Zebrafish DNA sequence from clone CH211-156L18 in linkage group 11,
            complete sequence
          Length = 175462

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 117  aaaaaactgaaacacataatgaag 140
            ||||||||| ||||||||||||||
Sbjct: 4826 aaaaaactgtaacacataatgaag 4849
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>gb|AF324892.1|AF324889S4 Homo sapiens myosin phosphatase target subunit 2 (MYPT2) gene, exons 11
             through 24, and complete cds
          Length = 150000

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ggcaaagaattaaaaaactg 125
             ||||||||||||||||||||
Sbjct: 56039 ggcaaagaattaaaaaactg 56058
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>gb|AC079374.4|AC079374 Arabidopsis thaliana chromosome 1 BAC F4F7 genomic sequence, complete
             sequence
          Length = 89690

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   aaaaaactgaaacacataat 136
             ||||||||||||||||||||
Sbjct: 48091 aaaaaactgaaacacataat 48110
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>gb|AC012362.7| Homo sapiens BAC clone RP11-404D15 from 2, complete sequence
          Length = 156618

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 412    aaggtaattgtttccctgaa 431
              ||||||||||||||||||||
Sbjct: 133982 aaggtaattgtttccctgaa 134001
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>gb|AC015973.2|AC015973 Homo sapiens BAC clone RP11-366C6 from Y, complete sequence
          Length = 171834

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ggcaaagaattaaaaaactg 125
             ||||||||||||||||||||
Sbjct: 39023 ggcaaagaattaaaaaactg 39042
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>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2
               (P1-P2-P3-IR2@) on chromosome Y
          Length = 4538292

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 106     ggcaaagaattaaaaaactg 125
               ||||||||||||||||||||
Sbjct: 4467938 ggcaaagaattaaaaaactg 4467919



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 106     ggcaaagaattaaaaaactg 125
               ||||||||||||||||||||
Sbjct: 1580910 ggcaaagaattaaaaaactg 1580929
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>gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana BAC T25N20 from chromosome I,
             complete sequence
          Length = 84203

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 125   gaaacacataatgaagtagccaaa 148
             ||||| ||||||||||||||||||
Sbjct: 64975 gaaacccataatgaagtagccaaa 64998
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>gb|AY891158.1| Synthetic construct Homo sapiens clone FLH009003.01L parathyroid
           hormone receptor 2 (PTHR2) mRNA, partial cds
          Length = 1653

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 412 aaggtaattgtttccctgaa 431
           ||||||||||||||||||||
Sbjct: 179 aaggtaattgtttccctgaa 198
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>gb|BC036811.1| Homo sapiens parathyroid hormone receptor 2, mRNA (cDNA clone
           MGC:46164 IMAGE:5734330), complete cds
          Length = 2810

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 412 aaggtaattgtttccctgaa 431
           ||||||||||||||||||||
Sbjct: 392 aaggtaattgtttccctgaa 411
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>emb|CR931725.6| Zebrafish DNA sequence from clone DKEY-22M10 in linkage group 11,
              complete sequence
          Length = 205299

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 117    aaaaaactgaaacacataatgaag 140
              ||||||||| ||||||||||||||
Sbjct: 175134 aaaaaactgtaacacataatgaag 175157



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 117    aaaaaactgaaacacataatgaag 140
              ||||||||| ||||||||||||||
Sbjct: 102082 aaaaaactgtaacacataatgaag 102105



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 117   aaaaaactgaaacacataatgaag 140
             ||||||||| ||||||||||||||
Sbjct: 54537 aaaaaactgtaacacataatgaag 54560



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 117   aaaaaactgaaacacataatgaag 140
             ||||||||| ||||||||||||||
Sbjct: 30136 aaaaaactgtaacacataatgaag 30159
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>emb|CR450709.12| Zebrafish DNA sequence from clone CH211-249J24 in linkage group 11,
              complete sequence
          Length = 157745

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 117    aaaaaactgaaacacataatgaag 140
              ||||||||| ||||||||||||||
Sbjct: 129911 aaaaaactgtaacacataatgaag 129888



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 117   aaaaaactgaaacacataatgaag 140
             ||||||||| ||||||||||||||
Sbjct: 94796 aaaaaactgtaacacataatgaag 94773



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 117   aaaaaactgaaacacataatgaag 140
             ||||||||| ||||||||||||||
Sbjct: 76543 aaaaaactgtaacacataatgaag 76520
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>dbj|AP000797.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-36B5, complete
             sequence
          Length = 148490

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   ttaaaaaactgaaacacata 134
             ||||||||||||||||||||
Sbjct: 13653 ttaaaaaactgaaacacata 13672
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>dbj|AP002991.3| Homo sapiens genomic DNA, chromosome 11 clone:CTC-774J1, complete
              sequence
          Length = 167901

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    ttaaaaaactgaaacacata 134
              ||||||||||||||||||||
Sbjct: 125636 ttaaaaaactgaaacacata 125655
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>gb|U25128.1|HSU25128 Human PTH2 parathyroid hormone receptor mRNA, complete cds
          Length = 2641

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 412 aaggtaattgtttccctgaa 431
           ||||||||||||||||||||
Sbjct: 321 aaggtaattgtttccctgaa 340
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>emb|CT476806.2| Pan troglodytes chromosome X BAC RP43-032D14, complete sequence
          Length = 145919

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 295    caatattcttcagcaaatgg 314
              ||||||||||||||||||||
Sbjct: 126442 caatattcttcagcaaatgg 126423
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>gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genomic sequence, complete
             sequence
          Length = 103223

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 125   gaaacacataatgaagtagccaaa 148
             ||||| ||||||||||||||||||
Sbjct: 14426 gaaacccataatgaagtagccaaa 14449


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,879,997
Number of Sequences: 3902068
Number of extensions: 4879997
Number of successful extensions: 96909
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96761
Number of HSP's gapped (non-prelim): 148
length of query: 471
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 449
effective length of database: 17,147,199,772
effective search space: 7699092697628
effective search space used: 7699092697628
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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