ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl29b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478319.1| Oryza sativa (japonica cultivar-group), mRNA 56 9e-05
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
3dbj|AK073417.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 9e-05
4dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
5dbj|AP003062.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 50 0.006
6gb|AC125326.4| Mus musculus BAC clone RP23-320H13 from chromosom... 46 0.086
7gb|AC132950.3| Mus musculus BAC clone RP23-183C6 from chromosome... 46 0.086
8gb|AC124533.4| Mus musculus BAC clone RP23-316F7 from chromosome... 46 0.086
9gb|AC147261.5| Mus musculus BAC clone RP24-288A1 from 5, complet... 46 0.086
10gb|AC134841.4| Mus musculus BAC clone RP24-372K3 from 5, complet... 46 0.086
11gb|AC133095.3| Mus musculus BAC clone RP23-270E19 from 5, comple... 46 0.086
12gb|AC134584.5| Mus musculus BAC clone RP23-299M6 from 5, complet... 46 0.086
13gb|AC124606.3| Mus musculus BAC clone RP23-82D2 from chromosome ... 46 0.086
14gb|AC163631.5| Mus musculus BAC clone RP23-147B15 from chromosom... 44 0.34
15gb|AC132604.4| Mus musculus BAC clone RP24-80P7 from chromosome ... 44 0.34
16ref|XM_653769.1| Aspergillus nidulans FGSC A4 hypothetical prote... 44 0.34
17gb|AC119237.17| Mus musculus chromosome 9, clone RP24-228P8, com... 42 1.4
18ref|XM_988528.1| PREDICTED: Mus musculus RIKEN cDNA 1520401A03 g... 42 1.4
19gb|AC122821.4| Mus musculus BAC clone RP23-201I4 from chromosome... 42 1.4
20gb|AF040646.2| Caenorhabditis elegans fosmid H17B01, complete se... 42 1.4
21dbj|AK028064.1| Mus musculus adult male cerebellum cDNA, RIKEN f... 42 1.4
22dbj|AK047830.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 42 1.4
23ref|NM_177132.2| Mus musculus RIKEN cDNA 1520401A03 gene (152040... 42 1.4
24gb|AC154239.3| Mus musculus BAC clone RP24-164C12 from chromosom... 42 1.4
25gb|AC145810.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
26gb|AC157598.4| Mus musculus BAC clone RP23-193D3 from chromosome... 40 5.3
27gb|AC157570.5| Mus musculus BAC clone RP23-105H5 from chromosome... 40 5.3
28gb|AY197549.1| Oncorhynchus mykiss complement C4 mRNA, partial cds 40 5.3
29gb|AC135809.4| Mus musculus BAC clone RP23-353F16 from chromosom... 40 5.3
30emb|AJ248287.2|CNSPAX05 Pyrococcus abyssi complete genome; segme... 40 5.3
31emb|AL050309.4|HSJ148M19 Human DNA sequence from clone RP1-148M1... 40 5.3
32emb|AJ544262.1|OMY544262 Oncorhynchus mykiss mRNA for complement... 40 5.3
33emb|AJ880056.1| Macaca mulatta igKV2m gene for immunoglobulin V ... 40 5.3
34emb|AJ880055.1| Macaca mulatta igKV2l gene for immunoglobulin V ... 40 5.3
35emb|CR407555.9| Zebrafish DNA sequence from clone DKEY-260H8 in ... 40 5.3
36emb|CR318652.16| Zebrafish DNA sequence from clone CH211-128O18 ... 40 5.3
37emb|CR387936.8| Zebrafish DNA sequence from clone CH211-85P6 in ... 40 5.3
38gb|AC068640.29| Homo sapiens 12 BAC RP11-105I4 (Roswell Park Can... 40 5.3
39dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
40dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
41dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
42dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
43gb|AY963749.1| Macaca mulatta clone mIGKV2l immunoglobulin kappa... 40 5.3
44gb|AY963748.1| Macaca mulatta clone mIGKV2m immunoglobulin kappa... 40 5.3
45emb|BX833466.1|CNS0A0DB Arabidopsis thaliana Full-length cDNA Co... 40 5.3
46gb|AC018462.4| Homo sapiens BAC clone RP11-270B14 from 2, comple... 40 5.3
47gb|AC009387.27| Homo sapiens 12 BAC RP11-110L15 (Roswell Park Ca... 40 5.3
48gb|AC007912.6|AC007912 Homo sapiens chromosome , clone RP11-8A1,... 40 5.3
49emb|BX294118.4| Zebrafish DNA sequence from clone DKEYP-38B6, co... 40 5.3
50dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
51dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
52dbj|AK073787.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
53gb|AC115296.6| Mus musculus BAC clone RP23-195I8 from chromosome... 40 5.3
54emb|BX927408.6| Zebrafish DNA sequence from clone DKEY-30I4 in l... 40 5.3
55gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 40 5.3
56gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
57gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
58emb|AL772417.3|CNS08C9V Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.3 
>ref|XM_478319.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4222

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 264  tccttttgggcctcaaatacgtcaaacctttcttcaggcccggcatag 311
            |||||||||||||||| || ||| | |||||||||| |||||||||||
Sbjct: 3982 tccttttgggcctcaagtatgtcgagcctttcttcaagcccggcatag 3935
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                                
Query: 264      tccttttgggcctcaaatacgtcaaacctttcttcaggcccggcatag 311
                |||||||||||||||| || ||| | |||||||||| |||||||||||
Sbjct: 19237584 tccttttgggcctcaagtatgtcgagcctttcttcaagcccggcatag 19237631
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>dbj|AK073417.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041J24, full
            insert sequence
          Length = 4222

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 264  tccttttgggcctcaaatacgtcaaacctttcttcaggcccggcatag 311
            |||||||||||||||| || ||| | |||||||||| |||||||||||
Sbjct: 3982 tccttttgggcctcaagtatgtcgagcctttcttcaagcccggcatag 3935
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>dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1163_G04
          Length = 106253

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 264   tccttttgggcctcaaatacgtcaaacctttcttcaggcccggcatag 311
             |||||||||||||||| || ||| | |||||||||| |||||||||||
Sbjct: 13810 tccttttgggcctcaagtatgtcgagcctttcttcaagcccggcatag 13857
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>dbj|AP003062.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-555G19, complete
              sequence
          Length = 171428

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 349    ctcctccctcaacttctctctgcct 373
              |||||||||||||||||||||||||
Sbjct: 147219 ctcctccctcaacttctctctgcct 147195
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>gb|AC125326.4| Mus musculus BAC clone RP23-320H13 from chromosome 5, complete sequence
          Length = 216667

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 345    tcttctcctccctcaacttctct 367
              |||||||||||||||||||||||
Sbjct: 141359 tcttctcctccctcaacttctct 141381
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>gb|AC132950.3| Mus musculus BAC clone RP23-183C6 from chromosome 5, complete sequence
          Length = 217825

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 345    tcttctcctccctcaacttctct 367
              |||||||||||||||||||||||
Sbjct: 209878 tcttctcctccctcaacttctct 209900
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>gb|AC124533.4| Mus musculus BAC clone RP23-316F7 from chromosome 5, complete sequence
          Length = 175666

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 345   tcttctcctccctcaacttctct 367
             |||||||||||||||||||||||
Sbjct: 13760 tcttctcctccctcaacttctct 13782
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>gb|AC147261.5| Mus musculus BAC clone RP24-288A1 from 5, complete sequence
          Length = 159935

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 345    tcttctcctccctcaacttctct 367
              |||||||||||||||||||||||
Sbjct: 141590 tcttctcctccctcaacttctct 141568
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>gb|AC134841.4| Mus musculus BAC clone RP24-372K3 from 5, complete sequence
          Length = 159033

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 345   tcttctcctccctcaacttctct 367
             |||||||||||||||||||||||
Sbjct: 94867 tcttctcctccctcaacttctct 94845
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>gb|AC133095.3| Mus musculus BAC clone RP23-270E19 from 5, complete sequence
          Length = 147415

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 345    tcttctcctccctcaacttctct 367
              |||||||||||||||||||||||
Sbjct: 120506 tcttctcctccctcaacttctct 120484
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>gb|AC134584.5| Mus musculus BAC clone RP23-299M6 from 5, complete sequence
          Length = 212518

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 345    tcttctcctccctcaacttctct 367
              |||||||||||||||||||||||
Sbjct: 159760 tcttctcctccctcaacttctct 159782
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>gb|AC124606.3| Mus musculus BAC clone RP23-82D2 from chromosome unknown, complete
             sequence
          Length = 225720

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 345   tcttctcctccctcaacttctct 367
             |||||||||||||||||||||||
Sbjct: 63237 tcttctcctccctcaacttctct 63215
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>gb|AC163631.5| Mus musculus BAC clone RP23-147B15 from chromosome 13, complete
             sequence
          Length = 211368

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 211   atatcagcacacacaaacatactcattcaa 240
             ||||||||||||||||| ||||||| ||||
Sbjct: 55207 atatcagcacacacaaatatactcactcaa 55236
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>gb|AC132604.4| Mus musculus BAC clone RP24-80P7 from chromosome 13, complete sequence
          Length = 164377

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 211    atatcagcacacacaaacatactcattcaa 240
              ||||||||||||||||| ||||||| ||||
Sbjct: 154242 atatcagcacacacaaatatactcactcaa 154271
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>ref|XM_653769.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1257.2), mRNA
          Length = 999

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 344 ctcttctcctccctcaacttctctct 369
           |||||||||||||||||| |||||||
Sbjct: 974 ctcttctcctccctcaacctctctct 949
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>gb|AC119237.17| Mus musculus chromosome 9, clone RP24-228P8, complete sequence
          Length = 177661

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 361   cttctctctgcctgccgcctc 381
             |||||||||||||||||||||
Sbjct: 87930 cttctctctgcctgccgcctc 87910
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>ref|XM_988528.1| PREDICTED: Mus musculus RIKEN cDNA 1520401A03 gene, transcript
            variant 3 (1520401A03Rik), mRNA
          Length = 2674

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 354  ccctcaacttctctctgcctg 374
            |||||||||||||||||||||
Sbjct: 1275 ccctcaacttctctctgcctg 1295
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>gb|AC122821.4| Mus musculus BAC clone RP23-201I4 from chromosome 17, complete sequence
          Length = 220013

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 354    ccctcaacttctctctgcctg 374
              |||||||||||||||||||||
Sbjct: 155648 ccctcaacttctctctgcctg 155668
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>gb|AF040646.2| Caenorhabditis elegans fosmid H17B01, complete sequence
          Length = 40812

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 343  cctcttctcctccctcaactt 363
            |||||||||||||||||||||
Sbjct: 3118 cctcttctcctccctcaactt 3098
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>dbj|AK028064.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched
            library, clone:1520401A03 product:hypothetical
            Glycine-rich region containing protein, full insert
            sequence
          Length = 2110

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 354  ccctcaacttctctctgcctg 374
            |||||||||||||||||||||
Sbjct: 1276 ccctcaacttctctctgcctg 1296
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>dbj|AK047830.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130002K19 product:hypothetical
            Glycine-rich region containing protein, full insert
            sequence
          Length = 3727

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 354  ccctcaacttctctctgcctg 374
            |||||||||||||||||||||
Sbjct: 2436 ccctcaacttctctctgcctg 2456
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>ref|NM_177132.2| Mus musculus RIKEN cDNA 1520401A03 gene (1520401A03Rik), mRNA
          Length = 3727

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 354  ccctcaacttctctctgcctg 374
            |||||||||||||||||||||
Sbjct: 2436 ccctcaacttctctctgcctg 2456
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>gb|AC154239.3| Mus musculus BAC clone RP24-164C12 from chromosome 14, complete
             sequence
          Length = 161815

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 9     aaacagagaaggagttcattt 29
             |||||||||||||||||||||
Sbjct: 16467 aaacagagaaggagttcattt 16447
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>gb|AC145810.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0059C14, complete sequence
          Length = 142138

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   tcttctcctccctcaacttc 364
             ||||||||||||||||||||
Sbjct: 65819 tcttctcctccctcaacttc 65800
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>gb|AC157598.4| Mus musculus BAC clone RP23-193D3 from chromosome 17, complete sequence
          Length = 222399

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 220    cacacaaacatactcattca 239
              ||||||||||||||||||||
Sbjct: 103300 cacacaaacatactcattca 103281
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>gb|AC157570.5| Mus musculus BAC clone RP23-105H5 from chromosome 12, complete sequence
          Length = 227238

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     caatgaaaacagagaaggag 22
             ||||||||||||||||||||
Sbjct: 31758 caatgaaaacagagaaggag 31739
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>gb|AY197549.1| Oncorhynchus mykiss complement C4 mRNA, partial cds
          Length = 2553

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 345 tcttctcctccctcaacttctctc 368
           |||||| |||||||||||||||||
Sbjct: 346 tcttcttctccctcaacttctctc 323
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>gb|AC135809.4| Mus musculus BAC clone RP23-353F16 from chromosome 7, complete sequence
          Length = 195041

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   tgcccctcttctcctccctc 358
             ||||||||||||||||||||
Sbjct: 67341 tgcccctcttctcctccctc 67360
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>emb|AJ248287.2|CNSPAX05 Pyrococcus abyssi complete genome; segment 5/6
          Length = 305600

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 347    ttctcctccctcaacttctc 366
              ||||||||||||||||||||
Sbjct: 266056 ttctcctccctcaacttctc 266037
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>emb|AL050309.4|HSJ148M19 Human DNA sequence from clone RP1-148M19 on chromosome Xp11.22-11.3
             Contains the 5' end of the KLF8 gene for Kruppel-like
             factor 8 and a ribosomal protein L23a (RPL23A) pseudogene,
             complete sequence
          Length = 177483

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   cacacacaaacatactcatt 237
             ||||||||||||||||||||
Sbjct: 37927 cacacacaaacatactcatt 37946
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>emb|AJ544262.1|OMY544262 Oncorhynchus mykiss mRNA for complement C4 (c4 gene)
          Length = 5508

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 345  tcttctcctccctcaacttctctc 368
            |||||| |||||||||||||||||
Sbjct: 2238 tcttcttctccctcaacttctctc 2215
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>emb|AJ880056.1| Macaca mulatta igKV2m gene for immunoglobulin V region kappa light
           chain
          Length = 706

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 343 cctcttctcctccctcaact 362
           ||||||||||||||||||||
Sbjct: 59  cctcttctcctccctcaact 40
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>emb|AJ880055.1| Macaca mulatta igKV2l gene for immunoglobulin V region kappa light
           chain
          Length = 706

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 343 cctcttctcctccctcaact 362
           ||||||||||||||||||||
Sbjct: 59  cctcttctcctccctcaact 40
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>emb|CR407555.9| Zebrafish DNA sequence from clone DKEY-260H8 in linkage group 5,
             complete sequence
          Length = 156095

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    ttatagtagtactttgacaa 50
             ||||||||||||||||||||
Sbjct: 33884 ttatagtagtactttgacaa 33903
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>emb|CR318652.16| Zebrafish DNA sequence from clone CH211-128O18 in linkage group 11,
             complete sequence
          Length = 179522

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   tcaacttctctctgcctgcc 376
             ||||||||||||||||||||
Sbjct: 49014 tcaacttctctctgcctgcc 48995
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>emb|CR387936.8| Zebrafish DNA sequence from clone CH211-85P6 in linkage group 8, complete
              sequence
          Length = 170195

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 235    attcaacattcctacctacaaaaa 258
              |||||||||||||||| |||||||
Sbjct: 160203 attcaacattcctaccaacaaaaa 160226
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>gb|AC068640.29| Homo sapiens 12 BAC RP11-105I4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 99930

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   agcacacacaaacatactca 235
             ||||||||||||||||||||
Sbjct: 51904 agcacacacaaacatactca 51885
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 363      tctctctgcctgccgcctcagcttgctc 390
                |||| |||||||||||||| ||||||||
Sbjct: 14889690 tctcgctgcctgccgcctctgcttgctc 14889663
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 345     tcttctcctccctcaacttc 364
               ||||||||||||||||||||
Sbjct: 8767048 tcttctcctccctcaacttc 8767029
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 340      gcccctcttctcctccctca 359
                ||||||||||||||||||||
Sbjct: 27109596 gcccctcttctcctccctca 27109615
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 221      acacaaacatactcattcaa 240
                ||||||||||||||||||||
Sbjct: 22715758 acacaaacatactcattcaa 22715777
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>gb|AY963749.1| Macaca mulatta clone mIGKV2l immunoglobulin kappa light chain
           variable region genomic sequence
          Length = 706

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 343 cctcttctcctccctcaact 362
           ||||||||||||||||||||
Sbjct: 59  cctcttctcctccctcaact 40
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>gb|AY963748.1| Macaca mulatta clone mIGKV2m immunoglobulin kappa light chain
           variable region genomic sequence
          Length = 706

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 343 cctcttctcctccctcaact 362
           ||||||||||||||||||||
Sbjct: 59  cctcttctcctccctcaact 40
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>emb|BX833466.1|CNS0A0DB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL57ZG01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 701

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 343 cctcttctcctccctcaact 362
           ||||||||||||||||||||
Sbjct: 481 cctcttctcctccctcaact 500
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>gb|AC018462.4| Homo sapiens BAC clone RP11-270B14 from 2, complete sequence
          Length = 189326

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 342    ccctcttctcctccctcaac 361
              ||||||||||||||||||||
Sbjct: 154095 ccctcttctcctccctcaac 154114
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>gb|AC009387.27| Homo sapiens 12 BAC RP11-110L15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 99867

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   agcacacacaaacatactca 235
             ||||||||||||||||||||
Sbjct: 51819 agcacacacaaacatactca 51800
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>gb|AC007912.6|AC007912 Homo sapiens chromosome , clone RP11-8A1, complete sequence
          Length = 171255

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    agcacacacaaacatactca 235
              ||||||||||||||||||||
Sbjct: 156569 agcacacacaaacatactca 156550
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>emb|BX294118.4| Zebrafish DNA sequence from clone DKEYP-38B6, complete sequence
          Length = 184616

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    cacacacaaacatactcatt 237
              ||||||||||||||||||||
Sbjct: 147864 cacacacaaacatactcatt 147883
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>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0473H04
          Length = 155204

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 340   gcccctcttctcctccctca 359
             ||||||||||||||||||||
Sbjct: 78406 gcccctcttctcctccctca 78425
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>dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0046O12
          Length = 128223

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   acacaaacatactcattcaa 240
             ||||||||||||||||||||
Sbjct: 74554 acacaaacatactcattcaa 74573
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>dbj|AK073787.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066K13, full
           insert sequence
          Length = 849

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 363 tctctctgcctgccgcctcagcttgctc 390
           |||| |||||||||||||| ||||||||
Sbjct: 32  tctcgctgcctgccgcctctgcttgctc 59
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>gb|AC115296.6| Mus musculus BAC clone RP23-195I8 from chromosome 12, complete sequence
          Length = 211561

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      caatgaaaacagagaaggag 22
              ||||||||||||||||||||
Sbjct: 149348 caatgaaaacagagaaggag 149329
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>emb|BX927408.6| Zebrafish DNA sequence from clone DKEY-30I4 in linkage group 18,
             complete sequence
          Length = 90451

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   tcaacttctctctgcctgcc 376
             ||||||||||||||||||||
Sbjct: 31242 tcaacttctctctgcctgcc 31261
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>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 339     tgcccctcttctcctccctc 358
               ||||||||||||||||||||
Sbjct: 1494244 tgcccctcttctcctccctc 1494263
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 345     tcttctcctccctcaacttc 364
               ||||||||||||||||||||
Sbjct: 8837811 tcttctcctccctcaacttc 8837792
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 363      tctctctgcctgccgcctcagcttgctc 390
                |||| |||||||||||||| ||||||||
Sbjct: 14843973 tctcgctgcctgccgcctctgcttgctc 14843946
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>emb|AL772417.3|CNS08C9V Oryza sativa chromosome 12, . BAC OSJNBa0041M09 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 146519

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 363   tctctctgcctgccgcctcagcttgctc 390
             |||| |||||||||||||| ||||||||
Sbjct: 30196 tctcgctgcctgccgcctctgcttgctc 30223


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,814,268
Number of Sequences: 3902068
Number of extensions: 4814268
Number of successful extensions: 88008
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87692
Number of HSP's gapped (non-prelim): 316
length of query: 399
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 377
effective length of database: 17,147,199,772
effective search space: 6464494314044
effective search space used: 6464494314044
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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