ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl29a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CP312_DROME (Q9VVN6) Probable cytochrome P450 312a1 (EC 1.14.-.-... 30 1.2
2SYHH_HUMAN (P49590) Histidyl-tRNA synthetase homolog (EC 6.1.1.2... 28 7.8

>CP312_DROME (Q9VVN6) Probable cytochrome P450 312a1 (EC 1.14.-.-) (CYPCCCXIIA1)|
          Length = 510

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +1

Query: 121 PTELKFTGKIS*LAKLIIP*ELR*LPKLFMVQLDLQKLKAWLTTPVILID 270
           P  L F G +  LAKL+ P  LR   ++    L   + K W+ T + L+D
Sbjct: 37  PPALPFIGHLHILAKLVGPHPLRRATEMINEHLHDHRAKLWMGTKLYLVD 86



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>SYHH_HUMAN (P49590) Histidyl-tRNA synthetase homolog (EC 6.1.1.21)|
           (Histidine--tRNA ligase homolog) (HisRS)
          Length = 506

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +2

Query: 38  AIPSGKMKKKILKPLFSMEKHQSTHENSPQS*NLREKYLDLL 163
           A+ + ++K    KP F ++  + T + SPQ   +REK LDL+
Sbjct: 40  AVLTSQLKAHQEKPNFIIKTPKGTRDLSPQHMVVREKILDLV 81


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,316,566
Number of Sequences: 219361
Number of extensions: 699191
Number of successful extensions: 1701
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1701
length of database: 80,573,946
effective HSP length: 72
effective length of database: 64,779,954
effective search space used: 1554718896
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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