>K125_TOBAC (O23826) 125 kDa kinesin-related protein|
          Length = 1006

 Score = 85.1 bits (209), Expect = 7e-17
 Identities = 42/62 (67%), Positives = 51/62 (82%), Gaps = 2/62 (3%)
 Frame = -3

Query: 436  PTGETPVRCEPEVPSKGTIESLRAMPIESLMDEFRENHPYES--SKEPKPSLIPRSPLAT 263
            PTG TP+R EP+VPSK TIESLRAMP+E L++EFREN+ +ES   KE KPSLIPRSP + 
Sbjct: 944  PTGATPIRSEPDVPSKVTIESLRAMPMEVLLEEFRENNSFESFQVKEVKPSLIPRSPFSQ 1003

Query: 262  LN 257
            +N
Sbjct: 1004 IN 1005

>K125_ARATH (P82266) Probable 125 kDa kinesin-related protein|
          Length = 1056

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 39/61 (63%), Positives = 49/61 (80%), Gaps = 2/61 (3%)
 Frame = -3

Query: 436  PTGETPVRCEPEVPSKGTIESLRAMPIESLMDEFRENHPYES--SKEPKPSLIPRSPLAT 263
            PTG TP + EPE+P+K TIESLRAMPIE+L++EFREN+ YES  +KE KP  + RSPL+ 
Sbjct: 948  PTGATPTKNEPEIPTKATIESLRAMPIETLVEEFRENNSYESFATKETKPQQLTRSPLSQ 1007

Query: 262  L 260
            L
Sbjct: 1008 L 1008

>DLL3_HUMAN (Q9NYJ7) Delta-like protein 3 precursor (Drosophila Delta homolog|
           3)
          Length = 618

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 18/71 (25%)
 Frame = -3

Query: 181 CPCCARFYGM---LALIQCLLHSC*NVSICCGAAE---------------YSCKKFYDEC 56
           C C   FYG+   ++ + C    C N  +C G A+                +C+K  D C
Sbjct: 298 CTCPRGFYGLRCEVSGVTCADGPCFNGGLCVGGADPDSAYICHCPPGFQGSNCEKRVDRC 357

Query: 55  LLHSC*NVSIC 23
            L  C N  +C
Sbjct: 358 SLQPCRNGGLC 368

>PALA_SCHPO (Q09807) pH-response regulator protein palA/rim20|
          Length = 701

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 12/45 (26%), Positives = 31/45 (68%), Gaps = 6/45 (13%)
 Frame = +1

Query: 22  NKLIHSSRNAKDTRHRIFYKNIRRLHNKL------IHSSKNAKDT 138
           +++I+S +++++ + + FY ++ +LH ++      + +S+NAKDT
Sbjct: 447 DEIINSVKSSQNMKEKGFYSDVIKLHEEVSLLKVNVENSQNAKDT 491

>PGBM_HUMAN (P98160) Basement membrane-specific heparan sulfate proteoglycan core|
            protein precursor (HSPG) (Perlecan) (PLC)
          Length = 4391

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +3

Query: 324  WFSRNSSIRDSIGIARNDSIVPLLGTSGSH 413
            W +RN  + D++ I+ N SI+ ++GT  S+
Sbjct: 3056 WKTRNQELEDNVHISPNGSIITIVGTRPSN 3085

>DLL3_MOUSE (O88516) Delta-like protein 3 precursor (Drosophila Delta homolog|
           3) (M-Delta-3)
          Length = 592

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 18/71 (25%)
 Frame = -3

Query: 181 CPCCARFYGM---LALIQCLLHSC*NVSICCGAAE---------------YSCKKFYDEC 56
           C C   FYG+   ++ + C    C N  +C G  +                +C+K  D C
Sbjct: 296 CACPRGFYGLRCEVSGVTCADGPCFNGGLCVGGEDPDSAYVCHCPPGFQGSNCEKRVDRC 355

Query: 55  LLHSC*NVSIC 23
            L  C N  +C
Sbjct: 356 SLQPCQNGGLC 366

>ZNF91_HUMAN (Q05481) Zinc finger protein 91 (Zinc finger protein HTF10) (HPF7)|
          Length = 1191

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 22/71 (30%), Positives = 32/71 (45%)
 Frame = +2

Query: 209 NQITLHTEKKYYHCFSVECRKWRARDERRLGFLARFIGMVLTELIHQGLDWHRSQRLDRA 388
           N    HTE+K Y C   EC K      +RL  L +       ++IH G   ++ +   +A
Sbjct: 675 NHKITHTEEKPYKC--KECDK----TFKRLSTLTKH------KIIHAGEKLYKCEECGKA 722

Query: 389 FARDFRLTPHR 421
           F R   LT H+
Sbjct: 723 FNRSSNLTIHK 733



 Score = 28.9 bits (63), Expect = 5.8
 Identities = 22/71 (30%), Positives = 32/71 (45%)
 Frame = +2

Query: 209 NQITLHTEKKYYHCFSVECRKWRARDERRLGFLARFIGMVLTELIHQGLDWHRSQRLDRA 388
           N    HTE+K Y C   EC K      +RL  L +       ++IH G   ++ +   +A
Sbjct: 367 NHKITHTEEKPYKC--KECDK----TFKRLSTLTKH------KIIHAGEKLYKCEECGKA 414

Query: 389 FARDFRLTPHR 421
           F R   LT H+
Sbjct: 415 FNRSSNLTIHK 425

>HELS_METJA (Q58524) Putative ski2-type helicase (EC 3.6.1.-) [Contains:|
           Endonuclease PI-MjaHel (EC 3.1.-.-) (Mja Hel intein)
           (Mja Pep3 intein)]
          Length = 1195

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 16  LHNKLIHSSRNAKDTRHRIFYKNIRRLHNKLIHSSKNAKD 135
           LH K     R +K   H I+ K +R++ NKL   +K+ K+
Sbjct: 490 LHKKYFLKCRISKGVAHYIYSKKLRKIFNKLNMLTKDNKN 529

>ZFP11_MOUSE (P10751) Zinc finger protein 11 (Zfp-11) (Krox-6.1A protein)|
          Length = 647

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 20/67 (29%), Positives = 29/67 (43%)
 Frame = +2

Query: 221 LHTEKKYYHCFSVECRKWRARDERRLGFLARFIGMVLTELIHQGLDWHRSQRLDRAFARD 400
           +HTE K Y C   EC K   R             +   ++IH+G   H+     RAF++ 
Sbjct: 162 IHTEAKPYRC--QECGKAFKRSHT----------LSQHQVIHKGEKPHKCDECGRAFSKH 209

Query: 401 FRLTPHR 421
             LT H+
Sbjct: 210 SSLTQHQ 216

>PHF2_HUMAN (O75151) PHD finger protein 2 (GRC5)|
          Length = 1101

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = -3

Query: 412 CEPEVPSKGTIESLRAMPIESLMDEFRENHPYESSKEPKPSLIPRSP 272
           C+ +   +     + A P +SL+++  +    ++ K PKPS IP+ P
Sbjct: 463 CDGDREKEEPPSPIEATPPQSLLEKVSKKKTPKTVKMPKPSKIPKPP 509

>EAA3_CAEEL (Q21353) Putative sodium-dependent excitatory amino acid|
           transporter glt-3
          Length = 532

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 11/37 (29%)
 Frame = +2

Query: 275 RARDERRLG-----------FLARFIGMVLTELIHQG 352
           RARD RR+G           FLA F G++L   IH G
Sbjct: 70  RARDARRIGIVTIIYYMITTFLATFTGIILVSSIHPG 106

>ZNF85_HUMAN (Q03923) Zinc finger protein 85 (Zinc finger protein HPF4) (HTF1)|
          Length = 595

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 20/67 (29%), Positives = 29/67 (43%)
 Frame = +2

Query: 221 LHTEKKYYHCFSVECRKWRARDERRLGFLARFIGMVLTELIHQGLDWHRSQRLDRAFARD 400
           +HT +K Y C   EC K             RF  +   ++IH G   ++ +   +AF R 
Sbjct: 251 IHTGEKPYKC--EECGK----------AFNRFSTLTTHKIIHTGEKPYKCKECGKAFNRS 298

Query: 401 FRLTPHR 421
             LT HR
Sbjct: 299 STLTTHR 305

>ZN184_HUMAN (Q99676) Zinc finger protein 184|
          Length = 751

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 18/67 (26%), Positives = 30/67 (44%)
 Frame = +2

Query: 224 HTEKKYYHCFSVECRKWRARDERRLGFLARFIGMVLTELIHQGLDWHRSQRLDRAFARDF 403
           HTE+K Y C   +C K  ++             +   + IH G   ++    D+AF+R  
Sbjct: 636 HTEEKPYQCN--KCEKTFSQSSH----------LTQHQRIHTGEKPYKCNECDKAFSRST 683

Query: 404 RLTPHRS 424
            LT H++
Sbjct: 684 HLTEHQN 690


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,255,455
Number of Sequences: 219361
Number of extensions: 1240734
Number of successful extensions: 3778
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3770
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)