Clone Name | rbastl29a02 |
---|---|
Clone Library Name | barley_pub |
>gb|AF261107.1|AF261107 Hordeum vulgare sucrose-phosphate synthase mRNA, partial cds Length = 2085 Score = 902 bits (455), Expect = 0.0 Identities = 464/467 (99%) Strand = Plus / Minus Query: 1 gttttcccactacatttatcatattgtccacttcaaaatttgtgaatagtacaaacaaaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2036 gttttcccactacatttatcatattgtccacttcaaaatttgtgaatagtacaaacaaaa 1977 Query: 61 ggtggaagttattcacagctcgaggatataccacacccacactctacaatctacaaacaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1976 ggtggaagttattcacagctcgaggatataccacacccacactctacaatctacaaacaa 1917 Query: 121 aatcggcattcccatcaagtatggaaatagtggcgctcggtttggctcgtacttcctctc 180 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1916 aatcggcattcccatcaagtatggaaatggtggcgctcggtttggctcgtacttcctctc 1857 Query: 181 attttcttcttcccttttgtggggcacccgcaaagatgttattgtgtcggcacgccaatg 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1856 attttcttcttcccttttgtggggcacccgcaaagatgttattgtgtcggcacaccaatg 1797 Query: 241 tgacgcagggcagacttgatgtcctctgtagtgcaaccctggacttcaatgatattggag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1796 tgacgcagggcagacttgatgtcctctgtagtgcagccctggacttcaatgatattggag 1737 Query: 301 ctgtccagtgcaacgacatcctgcaaggggtatctcctcactgtgtggattctgtttgcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1736 ctgtccagtgcaacgacatcctgcaaggggtatctcctcactgtgtggattctgtttgcg 1677 Query: 361 gcaatgttgaagtcacccttcaggattatggtcctgtggagaccccctagcagttcttca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1676 gcaatgttgaagtcacccttcaggattatggtcctgtggagaccccctagcagttcttca 1617 Query: 421 taatcggaatcaccactttcaccaacaatgaccacaatatttggcaa 467 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1616 taatcggaatcaccactttcaccaacaatgaccacaatatttggcaa 1570
>gb|AF534907.1| Triticum aestivum sucrose-phosphate synthase 9 mRNA, complete cds Length = 3339 Score = 729 bits (368), Expect = 0.0 Identities = 444/468 (94%), Gaps = 1/468 (0%) Strand = Plus / Minus Query: 1 gttttcccactacatttatc-atattgtccacttcaaaatttgtgaatagtacaaacaaa 59 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 3220 gttttcccactacatttatcgatattgtccacttcaaaatttgtgaatagtacaaacaaa 3161 Query: 60 aggtggaagttattcacagctcgaggatataccacacccacactctacaatctacaaaca 119 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 3160 aggtggaagttattcacagctcgagaatataccacacccacactctacaatctacaaaca 3101 Query: 120 aaatcggcattcccatcaagtatggaaatagtggcgctcggtttggctcgtacttcctct 179 |||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 3100 aaatcgacattcccatcaggtatggaaatagtggcgctcggtttggctcgttcttcctct 3041 Query: 180 cattttcttcttcccttttgtggggcacccgcaaagatgttattgtgtcggcacgccaat 239 | |||||||||||| ||| ||| || | ||||||||||||||||||||||||| ||||| Sbjct: 3040 ccttttcttcttccttttcgtgtggtgcgcgcaaagatgttattgtgtcggcacaccaat 2981 Query: 240 gtgacgcagggcagacttgatgtcctctgtagtgcaaccctggacttcaatgatattgga 299 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 2980 ctgacgcagggcagacttgatgtcctctgtagtgcaaccctggacttcgatgatgttgga 2921 Query: 300 gctgtccagtgcaacgacatcctgcaaggggtatctcctcactgtgtggattctgtttgc 359 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2920 gctgtccagtgcaacgacatcctgcaaggggtatctccggactgtgtggattctgtttgc 2861 Query: 360 ggcaatgttgaagtcacccttcaggattatggtcctgtggagaccccctagcagttcttc 419 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2860 agcaatgttgaagtcgcccttcaggattatggtcctgtggagaccccctagcagctcttc 2801 Query: 420 ataatcggaatcaccactttcaccaacaatgaccacaatatttggcaa 467 |||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 2800 gtaatcggaatcaccactttcaccaaccatgaccacgatatttggcaa 2753
>gb|BT009472.1| Triticum aestivum clone wr1.pk0028.h11:fis, full insert mRNA sequence Length = 1334 Score = 690 bits (348), Expect = 0.0 Identities = 418/440 (95%), Gaps = 1/440 (0%) Strand = Plus / Minus Query: 1 gttttcccactacatttatc-atattgtccacttcaaaatttgtgaatagtacaaacaaa 59 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1185 gttttcccactacatttatcgatattgtccacttcaaaatttgtgaatagtacaaacaaa 1126 Query: 60 aggtggaagttattcacagctcgaggatataccacacccacactctacaatctacaaaca 119 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1125 aggtggaagttattcacagctcgagaatataccacacccacactctacaatctacaaaca 1066 Query: 120 aaatcggcattcccatcaagtatggaaatagtggcgctcggtttggctcgtacttcctct 179 |||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 1065 aaatcgacattcccatcaggtatggaaatagtggcgctcggtttggctcgttcttcctct 1006 Query: 180 cattttcttcttcccttttgtggggcacccgcaaagatgttattgtgtcggcacgccaat 239 | |||||||||||| ||| ||| || | ||||||||||||||||||||||||| ||||| Sbjct: 1005 ccttttcttcttccttttcgtgtggtgcgcgcaaagatgttattgtgtcggcacaccaat 946 Query: 240 gtgacgcagggcagacttgatgtcctctgtagtgcaaccctggacttcaatgatattgga 299 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 945 ctgacgcagggcagacttgatgtcctctgtagtgcaaccctggacttcgatgatgttgga 886 Query: 300 gctgtccagtgcaacgacatcctgcaaggggtatctcctcactgtgtggattctgtttgc 359 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 885 gctgtccagtgcaacgacatcctgcaaggggtatctccggactgtgtggattctgtttgc 826 Query: 360 ggcaatgttgaagtcacccttcaggattatggtcctgtggagaccccctagcagttcttc 419 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 825 agcaatgttgaagtcgcccttcaggattatggtcctgtggagaccccctagcagctcttc 766 Query: 420 ataatcggaatcaccacttt 439 ||||||||||||||||||| Sbjct: 765 gtaatcggaatcaccacttt 746
>ref|XM_464358.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3259 Score = 178 bits (90), Expect = 1e-41 Identities = 210/250 (84%) Strand = Plus / Minus Query: 217 tgttattgtgtcggcacgccaatgtgacgcagggcagacttgatgtcctctgtagtgcaa 276 |||||||||||| |||| ||||| || |||| || ||||| ||||| |||||| || || Sbjct: 2992 tgttattgtgtcagcacaccaatctgctgcagagctgacttcatgtcatctgtactgtaa 2933 Query: 277 ccctggacttcaatgatattggagctgtccagtgcaacgacatcctgcaaggggtatctc 336 |||| | |||||||||| ||||||||||| || |||||||| || || || |||||| Sbjct: 2932 ccctcaatgccaatgatatttgagctgtccagggcgacgacatcttgtaacggatatctc 2873 Query: 337 ctcactgtgtggattctgtttgcggcaatgttgaagtcacccttcaggattatggtcctg 396 || || || ||||||||||| |||| |||||||| || ||||||||||| | ||||||| Sbjct: 2872 ctgacagtatggattctgttcgcggggatgttgaactcgcccttcaggatgacggtcctg 2813 Query: 397 tggagaccccctagcagttcttcataatcggaatcaccactttcaccaacaatgaccaca 456 |||||||| |||||||||||||||||||| ||||| |||||||||||||||| ||| || Sbjct: 2812 tggagaccacctagcagttcttcataatccgaatcgccactttcaccaacaaggactgca 2753 Query: 457 atatttggca 466 | |||||||| Sbjct: 2752 acatttggca 2743 Score = 69.9 bits (35), Expect = 7e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 115 aaacaaaatcggcattcccatcaagtatggaaatagtgg 153 |||||||||||||||| |||||||||||||||||||||| Sbjct: 3093 aaacaaaatcggcatttccatcaagtatggaaatagtgg 3055
>ref|XM_506735.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1572_F02.13 mRNA Length = 3327 Score = 178 bits (90), Expect = 1e-41 Identities = 210/250 (84%) Strand = Plus / Minus Query: 217 tgttattgtgtcggcacgccaatgtgacgcagggcagacttgatgtcctctgtagtgcaa 276 |||||||||||| |||| ||||| || |||| || ||||| ||||| |||||| || || Sbjct: 3020 tgttattgtgtcagcacaccaatctgctgcagagctgacttcatgtcatctgtactgtaa 2961 Query: 277 ccctggacttcaatgatattggagctgtccagtgcaacgacatcctgcaaggggtatctc 336 |||| | |||||||||| ||||||||||| || |||||||| || || || |||||| Sbjct: 2960 ccctcaatgccaatgatatttgagctgtccagggcgacgacatcttgtaacggatatctc 2901 Query: 337 ctcactgtgtggattctgtttgcggcaatgttgaagtcacccttcaggattatggtcctg 396 || || || ||||||||||| |||| |||||||| || ||||||||||| | ||||||| Sbjct: 2900 ctgacagtatggattctgttcgcggggatgttgaactcgcccttcaggatgacggtcctg 2841 Query: 397 tggagaccccctagcagttcttcataatcggaatcaccactttcaccaacaatgaccaca 456 |||||||| |||||||||||||||||||| ||||| |||||||||||||||| ||| || Sbjct: 2840 tggagaccacctagcagttcttcataatccgaatcgccactttcaccaacaaggactgca 2781 Query: 457 atatttggca 466 | |||||||| Sbjct: 2780 acatttggca 2771 Score = 69.9 bits (35), Expect = 7e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 115 aaacaaaatcggcattcccatcaagtatggaaatagtgg 153 |||||||||||||||| |||||||||||||||||||||| Sbjct: 3121 aaacaaaatcggcatttccatcaagtatggaaatagtgg 3083
>ref|XM_506734.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1572_F02.13 mRNA Length = 3490 Score = 178 bits (90), Expect = 1e-41 Identities = 210/250 (84%) Strand = Plus / Minus Query: 217 tgttattgtgtcggcacgccaatgtgacgcagggcagacttgatgtcctctgtagtgcaa 276 |||||||||||| |||| ||||| || |||| || ||||| ||||| |||||| || || Sbjct: 3054 tgttattgtgtcagcacaccaatctgctgcagagctgacttcatgtcatctgtactgtaa 2995 Query: 277 ccctggacttcaatgatattggagctgtccagtgcaacgacatcctgcaaggggtatctc 336 |||| | |||||||||| ||||||||||| || |||||||| || || || |||||| Sbjct: 2994 ccctcaatgccaatgatatttgagctgtccagggcgacgacatcttgtaacggatatctc 2935 Query: 337 ctcactgtgtggattctgtttgcggcaatgttgaagtcacccttcaggattatggtcctg 396 || || || ||||||||||| |||| |||||||| || ||||||||||| | ||||||| Sbjct: 2934 ctgacagtatggattctgttcgcggggatgttgaactcgcccttcaggatgacggtcctg 2875 Query: 397 tggagaccccctagcagttcttcataatcggaatcaccactttcaccaacaatgaccaca 456 |||||||| |||||||||||||||||||| ||||| |||||||||||||||| ||| || Sbjct: 2874 tggagaccacctagcagttcttcataatccgaatcgccactttcaccaacaaggactgca 2815 Query: 457 atatttggca 466 | |||||||| Sbjct: 2814 acatttggca 2805 Score = 69.9 bits (35), Expect = 7e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 115 aaacaaaatcggcattcccatcaagtatggaaatagtgg 153 |||||||||||||||| |||||||||||||||||||||| Sbjct: 3155 aaacaaaatcggcatttccatcaagtatggaaatagtgg 3117
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 178 bits (90), Expect = 1e-41 Identities = 210/250 (84%) Strand = Plus / Minus Query: 217 tgttattgtgtcggcacgccaatgtgacgcagggcagacttgatgtcctctgtagtgcaa 276 |||||||||||| |||| ||||| || |||| || ||||| ||||| |||||| || || Sbjct: 4715841 tgttattgtgtcagcacaccaatctgctgcagagctgacttcatgtcatctgtactgtaa 4715782 Query: 277 ccctggacttcaatgatattggagctgtccagtgcaacgacatcctgcaaggggtatctc 336 |||| | |||||||||| ||||||||||| || |||||||| || || || |||||| Sbjct: 4715781 ccctcaatgccaatgatatttgagctgtccagggcgacgacatcttgtaacggatatctc 4715722 Query: 337 ctcactgtgtggattctgtttgcggcaatgttgaagtcacccttcaggattatggtcctg 396 || || || ||||||||||| |||| |||||||| || ||||||||||| | ||||||| Sbjct: 4715721 ctgacagtatggattctgttcgcggggatgttgaactcgcccttcaggatgacggtcctg 4715662 Query: 397 tggagaccccctagcagttcttcataatcggaatcaccactttcaccaacaatgaccaca 456 |||||||| |||||||||||||||||||| ||||| |||||||||||||||| ||| || Sbjct: 4715661 tggagaccacctagcagttcttcataatccgaatcgccactttcaccaacaaggactgca 4715602 Query: 457 atatttggca 466 | |||||||| Sbjct: 4715601 acatttggca 4715592 Score = 69.9 bits (35), Expect = 7e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 115 aaacaaaatcggcattcccatcaagtatggaaatagtgg 153 |||||||||||||||| |||||||||||||||||||||| Sbjct: 4715942 aaacaaaatcggcatttccatcaagtatggaaatagtgg 4715904
>dbj|AP004066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1572_F02 Length = 93626 Score = 178 bits (90), Expect = 1e-41 Identities = 210/250 (84%) Strand = Plus / Minus Query: 217 tgttattgtgtcggcacgccaatgtgacgcagggcagacttgatgtcctctgtagtgcaa 276 |||||||||||| |||| ||||| || |||| || ||||| ||||| |||||| || || Sbjct: 87913 tgttattgtgtcagcacaccaatctgctgcagagctgacttcatgtcatctgtactgtaa 87854 Query: 277 ccctggacttcaatgatattggagctgtccagtgcaacgacatcctgcaaggggtatctc 336 |||| | |||||||||| ||||||||||| || |||||||| || || || |||||| Sbjct: 87853 ccctcaatgccaatgatatttgagctgtccagggcgacgacatcttgtaacggatatctc 87794 Query: 337 ctcactgtgtggattctgtttgcggcaatgttgaagtcacccttcaggattatggtcctg 396 || || || ||||||||||| |||| |||||||| || ||||||||||| | ||||||| Sbjct: 87793 ctgacagtatggattctgttcgcggggatgttgaactcgcccttcaggatgacggtcctg 87734 Query: 397 tggagaccccctagcagttcttcataatcggaatcaccactttcaccaacaatgaccaca 456 |||||||| |||||||||||||||||||| ||||| |||||||||||||||| ||| || Sbjct: 87733 tggagaccacctagcagttcttcataatccgaatcgccactttcaccaacaaggactgca 87674 Query: 457 atatttggca 466 | |||||||| Sbjct: 87673 acatttggca 87664 Score = 69.9 bits (35), Expect = 7e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 115 aaacaaaatcggcattcccatcaagtatggaaatagtgg 153 |||||||||||||||| |||||||||||||||||||||| Sbjct: 88014 aaacaaaatcggcatttccatcaagtatggaaatagtgg 87976
>dbj|AK121486.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150H16, full insert sequence Length = 3489 Score = 178 bits (90), Expect = 1e-41 Identities = 210/250 (84%) Strand = Plus / Minus Query: 217 tgttattgtgtcggcacgccaatgtgacgcagggcagacttgatgtcctctgtagtgcaa 276 |||||||||||| |||| ||||| || |||| || ||||| ||||| |||||| || || Sbjct: 3053 tgttattgtgtcagcacaccaatctgctgcagagctgacttcatgtcatctgtactgtaa 2994 Query: 277 ccctggacttcaatgatattggagctgtccagtgcaacgacatcctgcaaggggtatctc 336 |||| | |||||||||| ||||||||||| || |||||||| || || || |||||| Sbjct: 2993 ccctcaatgccaatgatatttgagctgtccagggcgacgacatcttgtaacggatatctc 2934 Query: 337 ctcactgtgtggattctgtttgcggcaatgttgaagtcacccttcaggattatggtcctg 396 || || || ||||||||||| |||| |||||||| || ||||||||||| | ||||||| Sbjct: 2933 ctgacagtatggattctgttcgcggggatgttgaactcgcccttcaggatgacggtcctg 2874 Query: 397 tggagaccccctagcagttcttcataatcggaatcaccactttcaccaacaatgaccaca 456 |||||||| |||||||||||||||||||| ||||| |||||||||||||||| ||| || Sbjct: 2873 tggagaccacctagcagttcttcataatccgaatcgccactttcaccaacaaggactgca 2814 Query: 457 atatttggca 466 | |||||||| Sbjct: 2813 acatttggca 2804 Score = 69.9 bits (35), Expect = 7e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 115 aaacaaaatcggcattcccatcaagtatggaaatagtgg 153 |||||||||||||||| |||||||||||||||||||||| Sbjct: 3154 aaacaaaatcggcatttccatcaagtatggaaatagtgg 3116
>dbj|AK098898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B04, full insert sequence Length = 3259 Score = 178 bits (90), Expect = 1e-41 Identities = 210/250 (84%) Strand = Plus / Minus Query: 217 tgttattgtgtcggcacgccaatgtgacgcagggcagacttgatgtcctctgtagtgcaa 276 |||||||||||| |||| ||||| || |||| || ||||| ||||| |||||| || || Sbjct: 2992 tgttattgtgtcagcacaccaatctgctgcagagctgacttcatgtcatctgtactgtaa 2933 Query: 277 ccctggacttcaatgatattggagctgtccagtgcaacgacatcctgcaaggggtatctc 336 |||| | |||||||||| ||||||||||| || |||||||| || || || |||||| Sbjct: 2932 ccctcaatgccaatgatatttgagctgtccagggcgacgacatcttgtaacggatatctc 2873 Query: 337 ctcactgtgtggattctgtttgcggcaatgttgaagtcacccttcaggattatggtcctg 396 || || || ||||||||||| |||| |||||||| || ||||||||||| | ||||||| Sbjct: 2872 ctgacagtatggattctgttcgcggggatgttgaactcgcccttcaggatgacggtcctg 2813 Query: 397 tggagaccccctagcagttcttcataatcggaatcaccactttcaccaacaatgaccaca 456 |||||||| |||||||||||||||||||| ||||| |||||||||||||||| ||| || Sbjct: 2812 tggagaccacctagcagttcttcataatccgaatcgccactttcaccaacaaggactgca 2753 Query: 457 atatttggca 466 | |||||||| Sbjct: 2752 acatttggca 2743 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 115 aaacaaaatcggcattcccatcaagtatggaaatagtgg 153 |||||||||||||||| ||||||||| |||||||||||| Sbjct: 3093 aaacaaaatcggcatttccatcaagtgtggaaatagtgg 3055
>dbj|AK063433.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-D12, full insert sequence Length = 2711 Score = 178 bits (90), Expect = 1e-41 Identities = 210/250 (84%) Strand = Plus / Minus Query: 217 tgttattgtgtcggcacgccaatgtgacgcagggcagacttgatgtcctctgtagtgcaa 276 |||||||||||| |||| ||||| || |||| || ||||| ||||| |||||| || || Sbjct: 1791 tgttattgtgtcagcacaccaatctgctgcagagctgacttcatgtcatctgtactgtaa 1732 Query: 277 ccctggacttcaatgatattggagctgtccagtgcaacgacatcctgcaaggggtatctc 336 |||| | |||||||||| ||||||||||| || |||||||| || || || |||||| Sbjct: 1731 ccctcaatgccaatgatatttgagctgtccagggcgacgacatcttgtaacggatatctc 1672 Query: 337 ctcactgtgtggattctgtttgcggcaatgttgaagtcacccttcaggattatggtcctg 396 || || || ||||||||||| |||| |||||||| || ||||||||||| | ||||||| Sbjct: 1671 ctgacagtatggattctgttcgcggggatgttgaactcgcccttcaggatgacggtcctg 1612 Query: 397 tggagaccccctagcagttcttcataatcggaatcaccactttcaccaacaatgaccaca 456 |||||||| |||||||||||||||||||| ||||| |||||||||||||||| ||| || Sbjct: 1611 tggagaccacctagcagttcttcataatccgaatcgccactttcaccaacaaggactgca 1552 Query: 457 atatttggca 466 | |||||||| Sbjct: 1551 acatttggca 1542 Score = 69.9 bits (35), Expect = 7e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 115 aaacaaaatcggcattcccatcaagtatggaaatagtgg 153 |||||||||||||||| |||||||||||||||||||||| Sbjct: 1892 aaacaaaatcggcatttccatcaagtatggaaatagtgg 1854
>dbj|AK065273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L08, full insert sequence Length = 3326 Score = 170 bits (86), Expect = 3e-39 Identities = 209/250 (83%) Strand = Plus / Minus Query: 217 tgttattgtgtcggcacgccaatgtgacgcagggcagacttgatgtcctctgtagtgcaa 276 |||||||||| | |||| ||||| || |||| || ||||| ||||| |||||| || || Sbjct: 3019 tgttattgtgccagcacaccaatctgctgcagagctgacttcatgtcatctgtactgtaa 2960 Query: 277 ccctggacttcaatgatattggagctgtccagtgcaacgacatcctgcaaggggtatctc 336 |||| | |||||||||| ||||||||||| || |||||||| || || || |||||| Sbjct: 2959 ccctcaatgccaatgatatttgagctgtccagggcgacgacatcttgtaacggatatctc 2900 Query: 337 ctcactgtgtggattctgtttgcggcaatgttgaagtcacccttcaggattatggtcctg 396 || || || ||||||||||| |||| |||||||| || ||||||||||| | ||||||| Sbjct: 2899 ctgacagtatggattctgttcgcggggatgttgaactcgcccttcaggatgacggtcctg 2840 Query: 397 tggagaccccctagcagttcttcataatcggaatcaccactttcaccaacaatgaccaca 456 |||||||| |||||||||||||||||||| ||||| |||||||||||||||| ||| || Sbjct: 2839 tggagaccacctagcagttcttcataatccgaatcgccactttcaccaacaaggactgca 2780 Query: 457 atatttggca 466 | |||||||| Sbjct: 2779 acatttggca 2770 Score = 69.9 bits (35), Expect = 7e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 115 aaacaaaatcggcattcccatcaagtatggaaatagtgg 153 |||||||||||||||| |||||||||||||||||||||| Sbjct: 3120 aaacaaaatcggcatttccatcaagtatggaaatagtgg 3082
>dbj|AB001338.1| Saccharum officinarum SoSPS2 premature mRNA for sucrose-phosphate synthase, complete cds Length = 3287 Score = 139 bits (70), Expect = 9e-30 Identities = 127/146 (86%) Strand = Plus / Minus Query: 298 gagctgtccagtgcaacgacatcctgcaaggggtatctcctcactgtgtggattctgttt 357 |||||||| |||| ||||||||||| ||||||||||||||||| |||||||| |||||| Sbjct: 2916 gagctgtcaagtgggacgacatcctgtaaggggtatctcctcaccgtgtggatcctgttt 2857 Query: 358 gcggcaatgttgaagtcacccttcaggattatggtcctgtggagaccccctagcagttct 417 |||| ||||||| || ||||||||||| | |||||| ||||||||||| |||||||| Sbjct: 2856 gcgggggtgttgaactcgcccttcaggataacggtcctatggagaccccccagcagttcc 2797 Query: 418 tcataatcggaatcaccactttcacc 443 || ||||| ||||| ||||||||||| Sbjct: 2796 tcgtaatctgaatcgccactttcacc 2771
>gb|AY111176.1| Zea mays CL11730_1 mRNA sequence Length = 678 Score = 83.8 bits (42), Expect = 5e-13 Identities = 106/131 (80%) Strand = Plus / Plus Query: 313 acgacatcctgcaaggggtatctcctcactgtgtggattctgtttgcggcaatgttgaag 372 ||||||||||||| ||||||||||| |||||||| ||||||||||| |||||||| Sbjct: 483 acgacatcctgcannnnntatctcctcaccgtgtggatcctgtttgcggcgatgttgaac 542 Query: 373 tcacccttcaggattatggtcctgtggagaccccctagcagttcttcataatcggaatca 432 || ||||| ||||| | |||||| |||||| |||||||| || ||||| ||||| Sbjct: 543 tcgccctttaggataacggtcctatggagannnnnnagcagttcctcgtaatctgaatcg 602 Query: 433 ccactttcacc 443 || |||||||| Sbjct: 603 ccgctttcacc 613 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 118 caaaatcggcattcccatcaagtatggaaa 147 ||||||||||||||||||| || ||||||| Sbjct: 272 caaaatcggcattcccatcgagcatggaaa 301
>gb|AY109442.1| Zea mays CL30224_1 mRNA sequence Length = 1735 Score = 81.8 bits (41), Expect = 2e-12 Identities = 146/181 (80%) Strand = Plus / Plus Query: 287 caatgatattggagctgtccagtgcaacgacatcctgcaaggggtatctcctcactgtgt 346 |||||||||| ||||| || || ||||| |||||||| || ||||| || || || || | Sbjct: 584 caatgatatttgagctatcaagagcaacaacatcctgtaaagggtaccttctgaccgtat 643 Query: 347 ggattctgtttgcggcaatgttgaagtcacccttcaggattatggtcctgtggagacccc 406 |||| || || || | | ||||||| ||||||| | ||| | ||| |||||||||| | Sbjct: 644 ggatcctattcgcaggagtgttgaatccacccttaacgatgactgtcttgtggagacctc 703 Query: 407 ctagcagttcttcataatcggaatcaccactttcaccaacaatgaccacaatatttggca 466 | | |||||| || ||||| ||||||||| |||||||||||||||||||| |||||||| Sbjct: 704 caaacagttcctcgtaatcagaatcaccagtttcaccaacaatgaccacagcatttggca 763 Query: 467 a 467 | Sbjct: 764 a 764
>ref|XM_481429.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3201 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 416 cttcataatcggaatcaccactttcaccaacaa 448 |||||||||| | |||||||||||||||||||| Sbjct: 2998 cttcataatcagtatcaccactttcaccaacaa 2966
>gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0096K16, complete sequence Length = 164501 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 416 cttcataatcggaatcaccactttcaccaacaa 448 |||||||||| | |||||||||||||||||||| Sbjct: 83074 cttcataatcagtatcaccactttcaccaacaa 83042
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 416 cttcataatcggaatcaccactttcaccaacaa 448 |||||||||| | |||||||||||||||||||| Sbjct: 12413759 cttcataatcagtatcaccactttcaccaacaa 12413727
>dbj|AP004041.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1115_A07 Length = 165126 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 416 cttcataatcggaatcaccactttcaccaacaa 448 |||||||||| | |||||||||||||||||||| Sbjct: 17788 cttcataatcagtatcaccactttcaccaacaa 17756
>dbj|AK101676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058F14, full insert sequence Length = 3858 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 416 cttcataatcggaatcaccactttcaccaacaa 448 |||||||||| | |||||||||||||||||||| Sbjct: 3193 cttcataatcagtatcaccactttcaccaacaa 3161
>gb|AY800388.1| Musa acuminata sucrose phosphate synthase (SPS) mRNA, partial cds Length = 518 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 416 cttcataatcggaatcaccactttcaccaaca 447 |||||||||| | ||||||||||||||||||| Sbjct: 32 cttcataatctgtatcaccactttcaccaaca 1
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.026 Identities = 69/84 (82%) Strand = Plus / Plus Query: 365 tgttgaagtcacccttcaggattatggtcctgtggagaccccctagcagttcttcataat 424 ||||||| |||||||| ||||| | ||| | || ||||| || | || |||||| |||| Sbjct: 25859055 tgttgaattcacccttaaggatgaccgtcttatgaagacctccaaacaattcttcgtaat 25859114 Query: 425 cggaatcaccactttcaccaacaa 448 | ||||||||| |||||||||||| Sbjct: 25859115 ctgaatcaccagtttcaccaacaa 25859138 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 118 caaaatcggcattcccatcaagtatggaaat 148 |||||||||||| ||||||||||||||||| Sbjct: 25858800 caaaatcggcatctccatcaagtatggaaat 25858830
>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017B12 Length = 157424 Score = 48.1 bits (24), Expect = 0.026 Identities = 69/84 (82%) Strand = Plus / Plus Query: 365 tgttgaagtcacccttcaggattatggtcctgtggagaccccctagcagttcttcataat 424 ||||||| |||||||| ||||| | ||| | || ||||| || | || |||||| |||| Sbjct: 14153 tgttgaattcacccttaaggatgaccgtcttatgaagacctccaaacaattcttcgtaat 14212 Query: 425 cggaatcaccactttcaccaacaa 448 | ||||||||| |||||||||||| Sbjct: 14213 ctgaatcaccagtttcaccaacaa 14236 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 118 caaaatcggcattcccatcaagtatggaaat 148 |||||||||||| ||||||||||||||||| Sbjct: 13898 caaaatcggcatctccatcaagtatggaaat 13928
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0416A11 Length = 171519 Score = 48.1 bits (24), Expect = 0.026 Identities = 69/84 (82%) Strand = Plus / Plus Query: 365 tgttgaagtcacccttcaggattatggtcctgtggagaccccctagcagttcttcataat 424 ||||||| |||||||| ||||| | ||| | || ||||| || | || |||||| |||| Sbjct: 141259 tgttgaattcacccttaaggatgaccgtcttatgaagacctccaaacaattcttcgtaat 141318 Query: 425 cggaatcaccactttcaccaacaa 448 | ||||||||| |||||||||||| Sbjct: 141319 ctgaatcaccagtttcaccaacaa 141342 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 118 caaaatcggcattcccatcaagtatggaaat 148 |||||||||||| ||||||||||||||||| Sbjct: 141004 caaaatcggcatctccatcaagtatggaaat 141034
>dbj|AK071732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111F20, full insert sequence Length = 1067 Score = 48.1 bits (24), Expect = 0.026 Identities = 69/84 (82%) Strand = Plus / Minus Query: 365 tgttgaagtcacccttcaggattatggtcctgtggagaccccctagcagttcttcataat 424 ||||||| |||||||| ||||| | ||| | || ||||| || | || |||||| |||| Sbjct: 410 tgttgaattcacccttaaggatgaccgtcttatgaagacctccaaacaattcttcgtaat 351 Query: 425 cggaatcaccactttcaccaacaa 448 | ||||||||| |||||||||||| Sbjct: 350 ctgaatcaccagtttcaccaacaa 327 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 118 caaaatcggcattcccatcaagtatggaaat 148 |||||||||||| ||||||||||||||||| Sbjct: 665 caaaatcggcatctccatcaagtatggaaat 635
>gb|AY445835.1| Bambusa oldhamii sucrose-phosphate synthase mRNA, complete cds Length = 3225 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 418 tcataatcggaatcaccactttcaccaacaa 448 |||||||| | |||||||||||||||||||| Sbjct: 3026 tcataatctgtatcaccactttcaccaacaa 2996
>gb|AC159254.2| Mus musculus BAC clone RP24-112C23 from chromosome 12, complete sequence Length = 163438 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 tcattttcttcttcccttttgt 200 |||||||||||||||||||||| Sbjct: 54898 tcattttcttcttcccttttgt 54877
>emb|CT571252.9| Mouse DNA sequence from clone RP24-91J7 on chromosome 12, complete sequence Length = 189925 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 tcattttcttcttcccttttgt 200 |||||||||||||||||||||| Sbjct: 100738 tcattttcttcttcccttttgt 100717
>gb|AC159269.3| Mus musculus BAC clone RP23-426N14 from chromosome 12, complete sequence Length = 184137 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 175 cctctcattttcttcttcccttttgt 200 ||||||||| |||||||||||||||| Sbjct: 91465 cctctcattgtcttcttcccttttgt 91490
>gb|AC110222.9| Mus musculus chromosome 3, clone RP24-211P23, complete sequence Length = 179958 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 aatctacaaacaaaatcggca 128 ||||||||||||||||||||| Sbjct: 10571 aatctacaaacaaaatcggca 10591
>ref|NM_180718.1| Arabidopsis thaliana AAO1 (ALDEHYDE OXIDASE 1) AT5G20960 (AAO1) transcript variant AT5G20960.1 mRNA, complete cds Length = 4484 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 167 tcgtacttcctctcattttcttctt 191 |||||||||||||| |||||||||| Sbjct: 929 tcgtacttcctctctttttcttctt 905
>ref|NM_122105.2| Arabidopsis thaliana AAO1 (ALDEHYDE OXIDASE 1) AT5G20960 (AAO1) transcript variant AT5G20960.2 mRNA, complete cds Length = 4426 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 167 tcgtacttcctctcattttcttctt 191 |||||||||||||| |||||||||| Sbjct: 929 tcgtacttcctctctttttcttctt 905
>gb|AY726439.1| Lycopersicon esculentum sucrose phosphate synthase mRNA, complete cds Length = 3373 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 416 cttcataatcggaatcaccactttc 440 |||||||||||| |||||||||||| Sbjct: 2969 cttcataatcggtatcaccactttc 2945
>gb|DQ521271.1| Cucumis melo sucrose phosphate synthase mRNA, complete cds Length = 3377 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 416 cttcataatcggaatcaccactttc 440 |||||||||||| |||||||||||| Sbjct: 2973 cttcataatcggtatcaccactttc 2949
>gb|AC159975.4| Mus musculus chromosome 3, clone RP24-204F16, complete sequence Length = 181930 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 aatctacaaacaaaatcggca 128 ||||||||||||||||||||| Sbjct: 27983 aatctacaaacaaaatcggca 27963
>gb|AC009652.14| Homo sapiens chromosome 11, clone RP11-428C19, complete sequence Length = 200823 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 tacttcctctcattttcttct 190 ||||||||||||||||||||| Sbjct: 145822 tacttcctctcattttcttct 145842
>gb|DQ364058.1| Cucumis melo sucrose phosphate synthase mRNA, complete cds Length = 3623 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 416 cttcataatcggaatcaccactttc 440 |||||||||||| |||||||||||| Sbjct: 2986 cttcataatcggtatcaccactttc 2962
>gb|AC137741.5| Homo sapiens chromosome 8, clone CTD-2059D3, complete sequence Length = 117100 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 173 ttcctctcattttcttcttcccttt 197 ||||||||||||| ||||||||||| Sbjct: 67469 ttcctctcattttgttcttcccttt 67493
>gb|AC027026.11| Homo sapiens chromosome 11, clone RP11-589F4, complete sequence Length = 155376 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 tacttcctctcattttcttct 190 ||||||||||||||||||||| Sbjct: 137321 tacttcctctcattttcttct 137301
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 Length = 96102 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 167 tcgtacttcctctcattttcttctt 191 |||||||||||||| |||||||||| Sbjct: 62126 tcgtacttcctctctttttcttctt 62102
>gb|AC069181.9| Homo sapiens chromosome 8, clone RP11-200A24, complete sequence Length = 139409 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 ttcctctcattttcttcttcccttt 197 ||||||||||||| ||||||||||| Sbjct: 133594 ttcctctcattttgttcttcccttt 133570
>dbj|AB005804.1| Arabidopsis thaliana AAO1 mRNA for aldehyde oxidase, complete cds Length = 4484 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 167 tcgtacttcctctcattttcttctt 191 |||||||||||||| |||||||||| Sbjct: 929 tcgtacttcctctctttttcttctt 905
>emb|X73477.1|STSPS S.tuberosum mRNA for sucrose-phosphate-synthase Length = 3622 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 416 cttcataatcggaatcaccactttc 440 |||||||||||| |||||||||||| Sbjct: 3082 cttcataatcggtatcaccactttc 3058
>dbj|AP006543.1| Homo sapiens genomic DNA, chromosome 8p12, clone: KB1250F11, complete sequence Length = 98657 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 ttcctctcattttcttcttcccttt 197 ||||||||||||| ||||||||||| Sbjct: 5024 ttcctctcattttgttcttcccttt 5000
>dbj|AP006183.1| Homo sapiens genomic DNA, chromosome 8p12, clone: KB1169H7, complete sequence Length = 158699 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 ttcctctcattttcttcttcccttt 197 ||||||||||||| ||||||||||| Sbjct: 128869 ttcctctcattttgttcttcccttt 128845
>gb|AF039895.1|AF039895 Arabidopsis thaliana putative aldehyde oxidase (AO1) mRNA, complete cds Length = 4205 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 167 tcgtacttcctctcattttcttctt 191 |||||||||||||| |||||||||| Sbjct: 875 tcgtacttcctctctttttcttctt 851
>emb|CT030695.5| Mouse DNA sequence from clone RP23-259F10 on chromosome 9, complete sequence Length = 173589 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 173 ttcctctcattttcttcttcccttt 197 ||||||||||||||||| ||||||| Sbjct: 156069 ttcctctcattttcttcatcccttt 156093
>dbj|AB051216.1| Lycopersicon esculentum sps mRNA for sucrose-phosphate synthase, complete cds Length = 3488 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 416 cttcataatcggaatcaccactttc 440 |||||||||||| |||||||||||| Sbjct: 2967 cttcataatcggtatcaccactttc 2943
>gb|AC127375.3| Mus musculus chromosome UNKNOWN clone RP23-48J17, complete sequence Length = 160811 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ttcctctcattttcttcttc 192 |||||||||||||||||||| Sbjct: 110882 ttcctctcattttcttcttc 110863
>ref|XM_519615.1| PREDICTED: Pan troglodytes similar to Myotubularin related protein 7 (LOC464006), mRNA Length = 1714 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aatgaccacaatatttggca 466 |||||||||||||||||||| Sbjct: 1450 aatgaccacaatatttggca 1431
>ref|NM_001034312.1| Bos taurus similar to CCR4-NOT transcription complex subunit 7 (CCR4-associated factor 1) (CAF1) (MGC128204), mRNA Length = 2766 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aatgaccacaatatttggca 466 |||||||||||||||||||| Sbjct: 1055 aatgaccacaatatttggca 1036
>gb|AC111024.13| Mus musculus chromosome 17, clone RP23-103P1, complete sequence Length = 219128 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 attgtccacttcaaaatttgtgaa 46 |||||| ||||||||||||||||| Sbjct: 104745 attgtcaacttcaaaatttgtgaa 104768
>gb|AC111023.12| Mus musculus chromosome 19, clone RP23-221A9, complete sequence Length = 228107 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tcattttcttcttccctttt 198 |||||||||||||||||||| Sbjct: 194167 tcattttcttcttccctttt 194186
>ref|NM_013354.5| Homo sapiens CCR4-NOT transcription complex, subunit 7 (CNOT7), transcript variant 1, mRNA Length = 2646 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aatgaccacaatatttggca 466 |||||||||||||||||||| Sbjct: 1074 aatgaccacaatatttggca 1055
>ref|XM_850844.1| PREDICTED: Canis familiaris similar to CCR4-NOT transcription complex subunit 7 (CCR4-associated factor 1) (CAF1), transcript variant 3 (LOC482895), mRNA Length = 1628 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aatgaccacaatatttggca 466 |||||||||||||||||||| Sbjct: 902 aatgaccacaatatttggca 883
>ref|XM_850800.1| PREDICTED: Canis familiaris similar to CCR4-NOT transcription complex subunit 7 (CCR4-associated factor 1) (CAF1), transcript variant 2 (LOC482895), mRNA Length = 1679 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aatgaccacaatatttggca 466 |||||||||||||||||||| Sbjct: 953 aatgaccacaatatttggca 934
>ref|XM_540010.2| PREDICTED: Canis familiaris similar to CCR4-NOT transcription complex subunit 7 (CCR4-associated factor 1) (CAF1), transcript variant 1 (LOC482895), mRNA Length = 1790 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aatgaccacaatatttggca 466 |||||||||||||||||||| Sbjct: 1064 aatgaccacaatatttggca 1045
>gb|AC024081.1| Arabidopsis thaliana chromosome III P1 MJK13 genomic sequence, complete sequence Length = 82893 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 tctcattttcttcttccctt 196 |||||||||||||||||||| Sbjct: 63107 tctcattttcttcttccctt 63088
>gb|AC121793.3| Mus musculus BAC clone RP23-407B23 from chromosome 9, complete sequence Length = 194815 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ctcattttcttcttcccttt 197 |||||||||||||||||||| Sbjct: 165003 ctcattttcttcttcccttt 164984
>gb|AC122320.4| Mus musculus BAC clone RP23-315F17 from 14, complete sequence Length = 197655 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 cttcctctcattttcttcttccct 195 ||||||||||||||||| |||||| Sbjct: 70598 cttcctctcattttcttgttccct 70575
>emb|AJ243961.1|OSA243961 Oryza sativa chromosome 4 BAC l1332 genomic sequences Length = 74658 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gtggcgctcggtttggctcg 169 |||||||||||||||||||| Sbjct: 40226 gtggcgctcggtttggctcg 40207
>gb|AC100953.12| Mus musculus chromosome 5, clone RP23-73P16, complete sequence Length = 216490 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gtacttcctctcattttctt 188 |||||||||||||||||||| Sbjct: 119207 gtacttcctctcattttctt 119188
>gb|AC147471.14| Medicago truncatula clone mth2-7a7, complete sequence Length = 139792 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 acttcaatgatattggagct 302 |||||||||||||||||||| Sbjct: 106124 acttcaatgatattggagct 106143
>gb|AC114934.2| Homo sapiens chromosome 5 clone CTD-2029K19, complete sequence Length = 114356 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 tgatgtcctctgtagtgcaaccct 280 ||||||||||||||||||| |||| Sbjct: 20195 tgatgtcctctgtagtgcatccct 20172
>gb|BC060852.1| Homo sapiens CCR4-NOT transcription complex, subunit 7, transcript variant 1, mRNA (cDNA clone MGC:71771 IMAGE:5273703), complete cds Length = 2687 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aatgaccacaatatttggca 466 |||||||||||||||||||| Sbjct: 1065 aatgaccacaatatttggca 1046
>gb|BC070187.1| Homo sapiens CCR4-NOT transcription complex, subunit 7, transcript variant 1, mRNA (cDNA clone MGC:88168 IMAGE:4738218), complete cds Length = 1357 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aatgaccacaatatttggca 466 |||||||||||||||||||| Sbjct: 1051 aatgaccacaatatttggca 1032
>emb|AL589796.7| Human DNA sequence from clone RP13-469O16 on chromosome 6 Contains a nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1)(B23, NPM) pseudogene and a CpG island, complete sequence Length = 59577 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 aaatttgtgaatagtacaaacaaa 59 |||||| ||||||||||||||||| Sbjct: 5189 aaatttatgaatagtacaaacaaa 5212
>emb|AL450449.2| Human DNA sequence from clone RP11-237F13 on chromosome X Contains part of the ED1 gene for ectodermal dysplasia 1, anhidrotic, a novel gene and a CCR4-NOT transcription complex, subunit 7 (CNOT7) pseudogene, complete sequence Length = 37323 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 aatgaccacaatatttggca 466 |||||||||||||||||||| Sbjct: 7873 aatgaccacaatatttggca 7892
>gb|AF086915.1| Homo sapiens CAF1 mRNA, complete cds Length = 1301 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aatgaccacaatatttggca 466 |||||||||||||||||||| Sbjct: 1038 aatgaccacaatatttggca 1019
>emb|AL136313.27| Human DNA sequence from clone RP4-551N11 on chromosome 6, complete sequence Length = 128152 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 catattgtccacttcaaaatttgt 43 |||||||||||||| ||||||||| Sbjct: 553 catattgtccacttaaaaatttgt 530
>gb|AC158131.4| Mus musculus chromosome 19, clone RP24-398D6, complete sequence Length = 82175 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tcattttcttcttccctttt 198 |||||||||||||||||||| Sbjct: 55086 tcattttcttcttccctttt 55067
>gb|AC159976.4| Mus musculus chromosome 3, clone RP24-224M8, complete sequence Length = 161306 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cacccacactctacaatcta 113 |||||||||||||||||||| Sbjct: 4525 cacccacactctacaatcta 4506
>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23, complete sequence Length = 164805 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gtggcgctcggtttggctcg 169 |||||||||||||||||||| Sbjct: 78595 gtggcgctcggtttggctcg 78614
>emb|BX649305.9| Zebrafish DNA sequence from clone DKEY-66F12 in linkage group 6, complete sequence Length = 101851 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ctcactgtgtggattctgtt 356 |||||||||||||||||||| Sbjct: 17783 ctcactgtgtggattctgtt 17802
>gb|BC103000.1| Bos taurus similar to CCR4-NOT transcription complex subunit 7 (CCR4-associated factor 1) (CAF1), mRNA (cDNA clone MGC:128204 IMAGE:7987452), complete cds Length = 2766 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aatgaccacaatatttggca 466 |||||||||||||||||||| Sbjct: 1055 aatgaccacaatatttggca 1036
>gb|DQ114495.1| Buchnera aphidicola tryptophan plasmid pTrp-BTg, partial sequence Length = 2963 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 45 aatagtacaaacaaaaggtggaagttat 72 ||||| |||||||||| ||||||||||| Sbjct: 1754 aatagaacaaacaaaacgtggaagttat 1781
>gb|AC148763.14| Medicago truncatula clone mth2-29o24, complete sequence Length = 104879 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tcattttcttcttccctttt 198 |||||||||||||||||||| Sbjct: 64071 tcattttcttcttccctttt 64052
>gb|AC079035.46| Homo sapiens 12 BAC RP11-863H1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 203977 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 22 tattgtccacttcaaaatttgtgaatag 49 |||||| ||||||||||||||| ||||| Sbjct: 127713 tattgtacacttcaaaatttgttaatag 127686
>dbj|AK001209.1| Homo sapiens cDNA FLJ10347 fis, clone NT2RM2001035, highly similar to CCR4-ASSOCIATED FACTOR 1 Length = 1276 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aatgaccacaatatttggca 466 |||||||||||||||||||| Sbjct: 1021 aatgaccacaatatttggca 1002
>dbj|AK021808.1| Homo sapiens cDNA FLJ11746 fis, clone HEMBA1005528, highly similar to CCR4-ASSOCIATED FACTOR 1 Length = 1309 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aatgaccacaatatttggca 466 |||||||||||||||||||| Sbjct: 1048 aatgaccacaatatttggca 1029
>gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map mi54, complete sequence Length = 107097 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ttcctctcattttcttcttc 192 |||||||||||||||||||| Sbjct: 74764 ttcctctcattttcttcttc 74745
>gb|AC025175.4| Homo sapiens chromosome 5 clone CTD-2081C10, complete sequence Length = 166907 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ttttcttcttcccttttgtg 201 |||||||||||||||||||| Sbjct: 146188 ttttcttcttcccttttgtg 146169
>gb|L46722.1| Homo sapiens BTG1 binding factor 1 (CAF1) mRNA, complete cds Length = 1214 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aatgaccacaatatttggca 466 |||||||||||||||||||| Sbjct: 957 aatgaccacaatatttggca 938
>dbj|AK035087.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430086L19 product:unclassifiable, full insert sequence Length = 1536 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cacccacactctacaatcta 113 |||||||||||||||||||| Sbjct: 1397 cacccacactctacaatcta 1378
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gtggcgctcggtttggctcg 169 |||||||||||||||||||| Sbjct: 31500912 gtggcgctcggtttggctcg 31500931
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 ataccacacccacactctacaatctaca 115 |||||||||||||||| |||||| |||| Sbjct: 3443594 ataccacacccacactttacaatttaca 3443621
>gb|AC138917.2| Homo sapiens chromosome 5 clone RP11-630I7, complete sequence Length = 154824 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 tgatgtcctctgtagtgcaaccct 280 ||||||||||||||||||| |||| Sbjct: 137106 tgatgtcctctgtagtgcatccct 137129
>gb|AC137781.2| Homo sapiens chromosome 5 clone RP11-1108I11, complete sequence Length = 161893 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 tgatgtcctctgtagtgcaaccct 280 ||||||||||||||||||| |||| Sbjct: 115583 tgatgtcctctgtagtgcatccct 115560
>gb|AC116534.7| Homo sapiens chromosome 11, clone RP11-265F24, complete sequence Length = 186744 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 tctcattttcttcttcccttttgt 200 |||||| ||||||||||||||||| Sbjct: 101398 tctcatattcttcttcccttttgt 101375
>gb|AC091050.3| Homo sapiens chromosome 8, clone RP11-242F4, complete sequence Length = 139980 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aatgaccacaatatttggca 466 |||||||||||||||||||| Sbjct: 21198 aatgaccacaatatttggca 21179
>dbj|AP000371.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K16N12 Length = 58864 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ttttcttcttcccttttgtg 201 |||||||||||||||||||| Sbjct: 36413 ttttcttcttcccttttgtg 36394
>dbj|AB022218.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJK13 Length = 82893 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 tctcattttcttcttccctt 196 |||||||||||||||||||| Sbjct: 63107 tctcattttcttcttccctt 63088
>emb|AJ131964.1|MTR131964 Medicago truncatula sucS1 gene, exons 1-14 Length = 8605 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cttcctctcattttcttctt 191 |||||||||||||||||||| Sbjct: 5685 cttcctctcattttcttctt 5704
>emb|BX539333.2| Mouse DNA sequence from clone RP23-138J24 on chromosome X, complete sequence Length = 212455 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ttcctctcattttcttcttc 192 |||||||||||||||||||| Sbjct: 174661 ttcctctcattttcttcttc 174642
>gb|AC110740.15| Mus musculus chromosome 8, clone RP24-421B13, complete sequence Length = 213782 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 aaaatttgtgaatagtacaaacaa 58 |||||| ||||||||||||||||| Sbjct: 130376 aaaattggtgaatagtacaaacaa 130399
>gb|AC115021.15| Mus musculus chromosome 3, clone RP24-232N19, complete sequence Length = 168461 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cacccacactctacaatcta 113 |||||||||||||||||||| Sbjct: 108479 cacccacactctacaatcta 108460
>emb|AL117264.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0313F03, complete sequence Length = 131195 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gtggcgctcggtttggctcg 169 |||||||||||||||||||| Sbjct: 119170 gtggcgctcggtttggctcg 119189
>dbj|AP006253.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-85A6, complete sequence Length = 130487 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 aatgaccacaatatttggca 466 |||||||||||||||||||| Sbjct: 16191 aatgaccacaatatttggca 16210
>emb|AL833642.1|HSM804955 Homo sapiens mRNA; cDNA DKFZp686O1079 (from clone DKFZp686O1079) Length = 2538 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aatgaccacaatatttggca 466 |||||||||||||||||||| Sbjct: 944 aatgaccacaatatttggca 925
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 ataccacacccacactctacaatctaca 115 |||||||||||||||| |||||| |||| Sbjct: 3443540 ataccacacccacactttacaatttaca 3443567
>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 116371 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 88 ataccacacccacactctacaatctaca 115 |||||||||||||||| |||||| |||| Sbjct: 88320 ataccacacccacactttacaatttaca 88293
>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137936 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 ataccacacccacactctacaatctaca 115 |||||||||||||||| |||||| |||| Sbjct: 122647 ataccacacccacactttacaatttaca 122674
>emb|CT010580.7| Mouse DNA sequence from clone RP23-233G23 on chromosome 17, complete sequence Length = 220567 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 attgtccacttcaaaatttgtgaa 46 |||||| ||||||||||||||||| Sbjct: 143514 attgtcaacttcaaaatttgtgaa 143537
>dbj|AB020860.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular colorectal and non-small cell lung cancer , segment 3/11 Length = 100000 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 aatgaccacaatatttggca 466 |||||||||||||||||||| Sbjct: 44984 aatgaccacaatatttggca 45003 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,568,615 Number of Sequences: 3902068 Number of extensions: 4568615 Number of successful extensions: 100880 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100517 Number of HSP's gapped (non-prelim): 353 length of query: 467 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 445 effective length of database: 17,147,199,772 effective search space: 7630503898540 effective search space used: 7630503898540 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)