ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl28h11 |
|---|---|
| Clone Library Name | barley_pub |
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 76.6 bits (187), Expect = 1e-14 Identities = 36/42 (85%), Positives = 37/42 (88%) Frame = -1 Query: 366 ALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 ALKNRNGPVKMPYMLLYPNTSD EK GLTAMGIPNS+SI Sbjct: 836 ALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 69.3 bits (168), Expect = 2e-12 Identities = 34/44 (77%), Positives = 35/44 (79%) Frame = -1 Query: 372 DPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 DP LKNRNGP K PYMLLYPNTSD G A GLTA GIPNS+SI Sbjct: 820 DPELKNRNGPAKFPYMLLYPNTSDHKG-AAAGLTAKGIPNSISI 862
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 65.1 bits (157), Expect = 4e-11 Identities = 31/44 (70%), Positives = 34/44 (77%) Frame = -1 Query: 372 DPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 D LKNRNGP + PYMLLYPNTSD G A G+TA GIPNS+SI Sbjct: 824 DAGLKNRNGPAEFPYMLLYPNTSDVTG-AAAGITAKGIPNSISI 866
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 60.8 bits (146), Expect = 8e-10 Identities = 30/45 (66%), Positives = 33/45 (73%) Frame = -1 Query: 375 KDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 KDP KNR GP PY LLYPNTSD G+ A GL+A GIPNS+SI Sbjct: 827 KDPHRKNRVGPTNFPYTLLYPNTSDLKGD-AAGLSARGIPNSISI 870
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 59.7 bits (143), Expect = 2e-09 Identities = 29/45 (64%), Positives = 33/45 (73%) Frame = -1 Query: 375 KDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 KDP LKNR GP PY L++PNTSD G A G+TA GIPNS+SI Sbjct: 820 KDPLLKNRVGPANFPYTLMFPNTSDNKG-AAEGITARGIPNSISI 863
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 51.6 bits (122), Expect = 5e-07 Identities = 26/45 (57%), Positives = 30/45 (66%) Frame = -1 Query: 375 KDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 KD +L+NRNGPVKMPY +L P D GLT GIPNS+SI Sbjct: 824 KDSSLRNRNGPVKMPYTVLLPTCEDE------GLTFRGIPNSISI 862
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 51.2 bits (121), Expect = 6e-07 Identities = 25/44 (56%), Positives = 31/44 (70%) Frame = -1 Query: 372 DPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 D +L+NR GPVKMPY LLYP++ + GLT GIPNS+SI Sbjct: 830 DESLRNRYGPVKMPYTLLYPSSEE-------GLTCRGIPNSISI 866
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 50.4 bits (119), Expect = 1e-06 Identities = 25/45 (55%), Positives = 30/45 (66%) Frame = -1 Query: 375 KDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 KD L+NR GP KMPY LLYP++ + GLT GIPNS+SI Sbjct: 816 KDETLRNRYGPAKMPYTLLYPSSEE-------GLTFRGIPNSISI 853
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 49.3 bits (116), Expect = 2e-06 Identities = 24/44 (54%), Positives = 31/44 (70%) Frame = -1 Query: 372 DPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 D L+NR+GPV+MPY LLYP++ + GLT GIPNS+SI Sbjct: 825 DEKLRNRHGPVEMPYTLLYPSSKE-------GLTFRGIPNSISI 861
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 46.2 bits (108), Expect = 2e-05 Identities = 22/44 (50%), Positives = 31/44 (70%) Frame = -1 Query: 372 DPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 DP+L+NR GPV++PY LL+ ++ + GLT GIPNS+SI Sbjct: 828 DPSLRNRTGPVQLPYTLLHRSSEE-------GLTFKGIPNSISI 864
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 46.2 bits (108), Expect = 2e-05 Identities = 23/44 (52%), Positives = 29/44 (65%) Frame = -1 Query: 372 DPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 D +L NR GPV++PY LL+PN+ GLT GIPNS+SI Sbjct: 830 DQSLSNRLGPVQLPYTLLHPNSE--------GLTCRGIPNSISI 865
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 45.4 bits (106), Expect = 3e-05 Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 1/45 (2%) Frame = -1 Query: 372 DPALK-NRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 DP+L+ NR GPV++PY LLYP++ + GLT GIPNS+SI Sbjct: 802 DPSLQGNRLGPVQLPYTLLYPSSEE-------GLTFRGIPNSISI 839
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 45.4 bits (106), Expect = 3e-05 Identities = 24/44 (54%), Positives = 28/44 (63%) Frame = -1 Query: 372 DPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 D LKNR G VKMPY LL+P++ G+T GIPNSVSI Sbjct: 823 DETLKNRTGLVKMPYTLLFPSSEG-------GVTGRGIPNSVSI 859
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 45.1 bits (105), Expect = 4e-05 Identities = 22/44 (50%), Positives = 31/44 (70%) Frame = -1 Query: 372 DPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 DP+L +R GPV++PY LL+P++ + GLT GIPNS+SI Sbjct: 828 DPSLYHRVGPVQLPYTLLHPSSKE-------GLTFRGIPNSISI 864
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 44.7 bits (104), Expect = 6e-05 Identities = 23/44 (52%), Positives = 29/44 (65%) Frame = -1 Query: 372 DPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 D L+NR GPV+MPY LL P++ + GLT GIPNS+SI Sbjct: 821 DEKLRNRCGPVQMPYTLLLPSSKE-------GLTFRGIPNSISI 857
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 44.7 bits (104), Expect = 6e-05 Identities = 22/40 (55%), Positives = 27/40 (67%) Frame = -1 Query: 360 KNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 KNR+GPV +PY LL+P + + GLT GIPNSVSI Sbjct: 827 KNRSGPVNVPYTLLFPTSEE-------GLTGKGIPNSVSI 859
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 43.1 bits (100), Expect = 2e-04 Identities = 23/44 (52%), Positives = 26/44 (59%) Frame = -1 Query: 372 DPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 D L NR+GPV PY LL+P + GLT GIPNSVSI Sbjct: 825 DNILTNRSGPVNAPYTLLFPTSEG-------GLTGKGIPNSVSI 861
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 41.6 bits (96), Expect = 5e-04 Identities = 22/41 (53%), Positives = 24/41 (58%) Frame = -1 Query: 363 LKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 L NR GPV PY LL+P + GLT GIPNSVSI Sbjct: 827 LTNRTGPVNAPYTLLFPTSEG-------GLTGKGIPNSVSI 860
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 38.5 bits (88), Expect = 0.004 Identities = 19/38 (50%), Positives = 23/38 (60%) Frame = -1 Query: 372 DPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGI 259 D L+NR GP KMPY LLYP++ + GLT GI Sbjct: 711 DETLRNRTGPAKMPYTLLYPSSEE-------GLTFRGI 741
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 37.7 bits (86), Expect = 0.007 Identities = 24/45 (53%), Positives = 27/45 (60%) Frame = -1 Query: 375 KDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 KD LKNR G +PY L+ P SDA G+T MGIPNS SI Sbjct: 904 KDRKLKNRCGAGILPYQLMKP-FSDA------GVTGMGIPNSTSI 941
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 36.6 bits (83), Expect = 0.015 Identities = 21/45 (46%), Positives = 25/45 (55%) Frame = -1 Query: 375 KDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 KD LKNR G +PY L+ P + G+T MGIPNS SI Sbjct: 887 KDRKLKNRCGAGILPYQLMKPFSDS-------GVTGMGIPNSTSI 924
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 36.2 bits (82), Expect = 0.020 Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 3/47 (6%) Frame = -1 Query: 372 DPALKNRNGPVKMPYMLLYP---NTSDANGEKALGLTAMGIPNSVSI 241 DP KNR+G +PY+LL P + +D + + MGIPNS+SI Sbjct: 890 DPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 35.8 bits (81), Expect = 0.026 Identities = 20/45 (44%), Positives = 28/45 (62%) Frame = -1 Query: 375 KDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 KD + +NR+G +PY+LL P + N A + MGIPNS+SI Sbjct: 890 KDDSRRNRHGAGVVPYVLLRP--LNGNPMDAKTVMEMGIPNSISI 932
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 34.3 bits (77), Expect = 0.076 Identities = 17/44 (38%), Positives = 26/44 (59%) Frame = -1 Query: 372 DPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 DP+ +NR G +PY L+ P++ G+T G+PNSV+I Sbjct: 863 DPSRRNRCGAGVLPYELMAPSSGP-------GITCRGVPNSVTI 899
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 32.3 bits (72), Expect = 0.29 Identities = 18/44 (40%), Positives = 24/44 (54%) Frame = -1 Query: 372 DPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 D KNR G +PY LL P++ G+T G+PNS+SI Sbjct: 882 DHGRKNRCGAGVLPYELLAPSSPP-------GVTCRGVPNSISI 918
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 31.6 bits (70), Expect = 0.49 Identities = 19/44 (43%), Positives = 24/44 (54%) Frame = -1 Query: 372 DPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 +P KNR G +PY LL P + G+T GIPNS+SI Sbjct: 860 NPENKNRCGAGIVPYELLKPFSEP-------GVTGRGIPNSISI 896
>ATF2_MOUSE (P16951) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) (MXBP protein) Length = 487 Score = 31.6 bits (70), Expect = 0.49 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 10/101 (9%) Frame = +2 Query: 44 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 193 H P + ++ ++ P IPG PQP +S+ K +TQ T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282 Query: 194 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 316 G T+ + RP S Q SP+ +P + G Sbjct: 283 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQNTSG 323
>ATF2_HUMAN (P15336) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) (HB16) Length = 487 Score = 31.2 bits (69), Expect = 0.64 Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 10/101 (9%) Frame = +2 Query: 44 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 193 H P + ++ ++ P IPG PQP +S+ K +TQ T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282 Query: 194 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 316 G T+ + RP S Q SP+ +P G Sbjct: 283 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSG 323
>ATF2_CHICK (O93602) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) Length = 487 Score = 31.2 bits (69), Expect = 0.64 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 10/90 (11%) Frame = +2 Query: 44 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*KV----------TQYTLRDTNRSMTS 193 H P + ++ ++ P IPG PQP +S+ K+ Q T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSIPGIPGPSSPQPVQSEAKLRLKAALTQQHPQVTNGDTAKGHPS 282 Query: 194 GRTTTERRKQRPCSAQMETLLGMPMAVSPS 283 G T+ + RP S Q SP+ Sbjct: 283 GLVRTQSEEPRPQSLQQPATSTTETPASPA 312
>GATA6_HUMAN (Q92908) Transcription factor GATA-6 (GATA-binding factor 6)| Length = 449 Score = 30.8 bits (68), Expect = 0.84 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = +1 Query: 46 LSSPYQHHLRHNHHFPSSTNPW---QLITATTQKPMKSNTIH 162 L+ Y HH H+HH PS +P+ L A P ++ +H Sbjct: 173 LNGTYHHHHHHHHHHPSPYSPYVGAPLTPAWPAGPFETPVLH 214
>ATF2_RAT (Q00969) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) Length = 487 Score = 29.6 bits (65), Expect = 1.9 Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 10/101 (9%) Frame = +2 Query: 44 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 193 H P + ++ ++ P IPG PQP +S+ K +TQ T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282 Query: 194 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 316 G + + RP S Q SP+ +P + G Sbjct: 283 GLVRAQSEESRPQSLQQPATSTTETPASPAHTTPQTQNTSG 323
>HXA1_MOUSE (P09022) Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein| ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein ERA-1-399) Length = 331 Score = 29.3 bits (64), Expect = 2.4 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +1 Query: 46 LSSPYQHHLRHNHHFPSS 99 +SSP+ HH H+HH P + Sbjct: 56 ISSPHHHHHHHHHHHPQT 73
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = -1 Query: 363 LKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 241 LKNR G + Y LL P + G+T MG+P S+SI Sbjct: 863 LKNRAGAGVVKYELLKPTSEH-------GVTGMGVPYSISI 896
>YF1M_CAEEL (Q21874) Hypothetical protein R09E10.5 precursor| Length = 1459 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +2 Query: 263 PMAVSPSAFSPLASDVLGYSSM*GIFT 343 PM + P FSP+ SDV G M G+ T Sbjct: 1431 PMTLEPRGFSPVPSDVRGSQGMLGLNT 1457
>C18AA_PAEPP (Q45358) Parasporal crystal protein cry18Aa (Parasporal| delta-endotoxin CryXVIIIA(a)) (Crystaline parasporal protoxin) (79 kDa crystal protein) Length = 706 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +1 Query: 139 PMKSNTIHLARHEPIHDQRTDDYRKKETKTM 231 P+ +NTI PI+ RTD +RKK T+ + Sbjct: 74 PIDNNTICSTDFTPINVMRTDPFRKKSTQEL 104
>DDLA_SHIFL (P0A6K0) D-alanine--D-alanine ligase A (EC 6.3.2.4)| (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) Length = 364 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +2 Query: 149 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 283 VT+ LRD ++ T T + A++E+ LG+P+ V P+ Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187
>DDLA_ECOLI (P0A6J8) D-alanine--D-alanine ligase A (EC 6.3.2.4)| (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) Length = 364 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +2 Query: 149 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 283 VT+ LRD ++ T T + A++E+ LG+P+ V P+ Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187
>DDLA_ECOL6 (Q8FKE3) D-alanine--D-alanine ligase A (EC 6.3.2.4)| (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) Length = 364 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +2 Query: 149 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 283 VT+ LRD ++ T T + A++E+ LG+P+ V P+ Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187
>DDLA_ECO57 (P0A6J9) D-alanine--D-alanine ligase A (EC 6.3.2.4)| (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) Length = 364 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +2 Query: 149 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 283 VT+ LRD ++ T T + A++E+ LG+P+ V P+ Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187
>AHC1_YEAST (Q12433) Protein AHC1 (ADA HAT complex component 1)| Length = 566 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 8/44 (18%) Frame = +1 Query: 46 LSSPYQHHLRHNHHFPSS--------TNPWQLITATTQKPMKSN 153 + SP Q L+H HH P+S TN +Q+ T + + +++N Sbjct: 1 MMSPAQDKLQHQHHNPNSSSSSSSKMTNVYQVTTPKSPQDLENN 44
>FOXGB_CHICK (Q90964) Forkhead box protein G1B (Forkhead-related protein FKHL1)| (Transcription factor BF-1) (Brain factor 1) (BF1) (CBF-1) (Proto-oncogene C-QIN) (N-62-5) (CEQ 3-1) Length = 451 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/38 (28%), Positives = 17/38 (44%) Frame = +1 Query: 37 HASLSSPYQHHLRHNHHFPSSTNPWQLITATTQKPMKS 150 H + P+ HH H+HH P P + A + K+ Sbjct: 38 HHNSHHPHHHHHHHHHHPPPPQQPQRAAAAEEEDEEKA 75
>VGLM_EBV (P03215) Glycoprotein M| Length = 405 Score = 27.7 bits (60), Expect = 7.1 Identities = 17/50 (34%), Positives = 23/50 (46%) Frame = +2 Query: 119 LPQPPRSQ*KVTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPM 268 L PR + T R+ RS TS ++ R+QRP S Q +PM Sbjct: 346 LESEPRPRPSRTPSPGRNRRRSSTSSSSSRSTRRQRPVSTQALVSSVLPM 395
>CADH1_RAT (Q9R0T4) Epithelial-cadherin precursor (E-cadherin) (Uvomorulin)| (Cadherin-1) (CD324 antigen) [Contains: E-Cad/CTF1; E-Cad/CTF2; E-Cad/CTF3] Length = 886 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 12/53 (22%) Frame = +1 Query: 1 LEMKRMRTRVLIHA------------SLSSPYQHHLRHNHHFPSSTNPWQLIT 123 L++ ++ T L+HA +L S HH RH+H P S + +L+T Sbjct: 93 LKLHKLETSFLVHAWDSSYRKLSTKVTLKSLGHHHHRHHHRDPVSESNPELLT 145
>HIPK4_RAT (Q4V793) Homeodomain-interacting protein kinase 4 (EC 2.7.11.1)| Length = 616 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +1 Query: 31 LIHASLSSPYQHHLRHNHHFPSSTNPWQL 117 L+HA+ + HH + P +TNPWQL Sbjct: 238 LLHAARKA---HHFFKRNPHPDATNPWQL 263
>YO25_CAEEL (P34675) Hypothetical protein ZK688.5| Length = 1620 Score = 27.7 bits (60), Expect = 7.1 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Frame = +2 Query: 98 PLIPGN*LPQPPRSQ*KVTQYTLRDTNRSMTSGRTTTERRKQRPCS--AQMETLLGMPMA 271 P +P LP P Q + TS R TT R +P + A+ ETL P+A Sbjct: 628 PSVPVETLPPPGSDQ------------QPGTSRRFTTHRFNVQPDARGAETETLAPFPVA 675 Query: 272 VSPSAFSPLASDV 310 + P+ +A ++ Sbjct: 676 IEPNELQRIAKNI 688
>GDS1_YEAST (P41913) Protein GDS1| Length = 522 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/53 (30%), Positives = 24/53 (45%) Frame = +2 Query: 146 KVTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLAS 304 K Y DTN SMT + T + + +Q ++L P S ++ S AS Sbjct: 325 KKRNYMDEDTNESMTEPKKTKTTKPGKQTKSQSLSVLSTPKKGSSASLSTFAS 377
>QIN_AVIS3 (P56260) Transforming protein Qin (Oncogene Qin)| Length = 387 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/38 (28%), Positives = 17/38 (44%) Frame = +1 Query: 37 HASLSSPYQHHLRHNHHFPSSTNPWQLITATTQKPMKS 150 H + P+ HH H+HH P P + A + K+ Sbjct: 38 HHNSHHPHHHHHHHHHHPPPPQQPQRAAAAEEEDEEKA 75
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 24.6 bits (52), Expect(2) = 8.0 Identities = 10/36 (27%), Positives = 19/36 (52%) Frame = +1 Query: 25 RVLIHASLSSPYQHHLRHNHHFPSSTNPWQLITATT 132 R+ + ++ ++ HH +H+HH P + T TT Sbjct: 10 RLSLPSTTTTRDHHHQQHHHHPPPPPSRTHFTTITT 45 Score = 21.2 bits (43), Expect(2) = 8.0 Identities = 11/41 (26%), Positives = 16/41 (39%) Frame = +3 Query: 108 LATNYRNHPEANEK*HNTPCETRTDP*PADGRLPKEGNKDH 230 L ++ HP + H+ P R P D P +DH Sbjct: 65 LFLSFPPHPPRPPQDHHRPTPARDHRDPRDHLPPTRTRRDH 105
>GLTL2_MOUSE (Q9D2N8) Polypeptide N-acetylgalactosaminyltransferase-like protein| 2 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase-like protein 2) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase-like protein 2) (Polypeptide GalNAc tra Length = 638 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Frame = -1 Query: 219 FLLSVVVRPLVMDRF-VSRKVYCVTFHWLL 133 F LS V +P +R + R++ C TFHW L Sbjct: 459 FTLSKVAKPDCTERLKLQRRLGCRTFHWFL 488 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.131 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,142,786 Number of Sequences: 219361 Number of extensions: 923496 Number of successful extensions: 2912 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 2648 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2847 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
