ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl28h10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SOPB_SALDZ (Q9AH19) Inositol phosphate phosphatase sopB (EC 3.1.... 30 1.1
2SOPB_SALBL (Q9RER2) Inositol phosphate phosphatase sopB (EC 3.1.... 28 4.2
3SOPB_SALTY (O30916) Inositol phosphate phosphatase sopB (EC 3.1.... 28 4.2
4SOPB_SALTI (Q8Z7R1) Inositol phosphate phosphatase sopB (EC 3.1.... 28 4.2
5SOPB_SALDU (O34105) Inositol phosphate phosphatase sopB (EC 3.1.... 28 7.2
6CIT1_ECOLI (P07661) Citrate-proton symporter (Citrate transporte... 27 9.4
7PKNA_MYCLE (P54743) Probable serine/threonine-protein kinase pkn... 27 9.4
8IRS2_MOUSE (P81122) Insulin receptor substrate 2 (IRS-2) (4PS) 27 9.4
9IRS2_HUMAN (Q9Y4H2) Insulin receptor substrate 2 (IRS-2) 27 9.4

>SOPB_SALDZ (Q9AH19) Inositol phosphate phosphatase sopB (EC 3.1.3.-) (Effector|
           protein sopB) (Fragment)
          Length = 416

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
 Frame = +2

Query: 215 GRRSACLSLGLGLATAAVFHTTPARATVDGDEEPEPANNGW---WLTEFP 355
           G     L LG GL T+  ++       +  D  PE    GW   WL ++P
Sbjct: 215 GVNELALKLGFGLKTSDSYNVEALHQLLGNDLRPEAKPGGWVGDWLAQYP 264



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>SOPB_SALBL (Q9RER2) Inositol phosphate phosphatase sopB (EC 3.1.3.-) (Effector|
           protein sopB) (Fragment)
          Length = 433

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
 Frame = +2

Query: 215 GRRSACLSLGLGLATAAVFHTTPARATVDGDEEPEPANNGW---WLTEFP 355
           G     L LG GL  +  ++       +  D  PE    GW   WL ++P
Sbjct: 264 GVNELALKLGFGLKASDSYNAEALHQLLGNDLRPEARPGGWVGEWLAQYP 313



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>SOPB_SALTY (O30916) Inositol phosphate phosphatase sopB (EC 3.1.3.-) (Effector|
           protein sopB)
          Length = 561

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
 Frame = +2

Query: 215 GRRSACLSLGLGLATAAVFHTTPARATVDGDEEPEPANNGW---WLTEFP 355
           G     L LG GL  +  ++       +  D  PE    GW   WL ++P
Sbjct: 360 GVNELALKLGFGLKASDSYNAEALHQLLGNDLRPEARPGGWVGEWLAQYP 409



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>SOPB_SALTI (Q8Z7R1) Inositol phosphate phosphatase sopB (EC 3.1.3.-) (Effector|
           protein sopB)
          Length = 561

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
 Frame = +2

Query: 215 GRRSACLSLGLGLATAAVFHTTPARATVDGDEEPEPANNGW---WLTEFP 355
           G     L LG GL  +  ++       +  D  PE    GW   WL ++P
Sbjct: 360 GVNELALKLGFGLKASDSYNAEALHQLLGNDLRPEARPGGWVGEWLAQYP 409



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>SOPB_SALDU (O34105) Inositol phosphate phosphatase sopB (EC 3.1.3.-) (Effector|
           protein sopB)
          Length = 561

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
 Frame = +2

Query: 215 GRRSACLSLGLGLATAAVFHTTPARATVDGDEEPEPANNGW---WLTEFP 355
           G     L LG GL  +  ++       +  D  PE    GW   WL ++P
Sbjct: 360 GVNELALKLGFGLKASDSYNAEALYQLLGNDLRPEARPGGWVGEWLAQYP 409



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>CIT1_ECOLI (P07661) Citrate-proton symporter (Citrate transporter) (Citrate|
           carrier protein) (Citrate utilization determinant)
           (Citrate utilization protein A)
          Length = 431

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 221 RSACLSLGLGLATAAVFHTTPARATVDGDEEPEPANNGWWL 343
           R+   SL   LATA     TPA +T       + ++ GWWL
Sbjct: 362 RTVGFSLAFSLATAIFGGLTPAISTALVQLTGDKSSPGWWL 402



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>PKNA_MYCLE (P54743) Probable serine/threonine-protein kinase pknA (EC|
           2.7.11.1)
          Length = 437

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 18/50 (36%), Positives = 20/50 (40%)
 Frame = +3

Query: 198 TPSSHRAGDQXXXXXXXXXXXXXCSTRHPPAPPLTATRSRSRPITAGGSP 347
           TPSS RA                C T+  PAP       RSRP T+G  P
Sbjct: 286 TPSSGRASPTTIPSSTQARAAVACGTK-TPAP------RRSRPSTSGNRP 328



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>IRS2_MOUSE (P81122) Insulin receptor substrate 2 (IRS-2) (4PS)|
          Length = 1321

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 282 PPAPPLTATRSRSRPITAGGSPSS 353
           PPAPPL A+ + S  + +  SP+S
Sbjct: 925 PPAPPLLASAASSSSLLSASSPAS 948



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>IRS2_HUMAN (Q9Y4H2) Insulin receptor substrate 2 (IRS-2)|
          Length = 1338

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 282  PPAPPLTATRSRSRPITAGGSPSS 353
            PPAPPL A+ + S  + +  SP+S
Sbjct: 933  PPAPPLLASAASSSSLLSASSPAS 956


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.129    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,644,468
Number of Sequences: 219361
Number of extensions: 661520
Number of successful extensions: 1471
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1471
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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