ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl28h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY145086.1| Aegilops tauschii rust-resistance protein Lr21 ge... 58 3e-05
2gb|AF532104.1|AF532104S1 Aegilops tauschii strain TA1649 cosmid ... 58 3e-05
3gb|AY139587.1| Triticum aestivum Lr21 gene, Lr21-R-S recombinant... 58 3e-05
4gb|AY139586.1| Triticum aestivum Lr21 gene, Lr21-S allele, parti... 58 3e-05
5gb|AC104619.5| Homo sapiens BAC clone RP11-192C21 from 4, comple... 46 0.10
6gb|AC158412.4| Cercopithecus aethiops clone CH252-436N4, complet... 44 0.40
7gb|AE014830.1| Plasmodium falciparum 3D7 chromosome 10 section 2... 44 0.40
8gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold 44 0.40
9gb|AC124193.2| Mus musculus BAC clone RP23-277F3 from 16, comple... 42 1.6
10dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 42 1.6
11gb|AC068327.14| Homo sapiens chromosome 15, clone RP11-394G8, co... 42 1.6
12gb|AC026583.10| Homo sapiens chromosome 15, clone RP11-20C17, co... 42 1.6
13gb|AC154770.2| Mus musculus BAC clone RP24-448C20 from chromosom... 42 1.6
14gb|AC006211.1|AC006211 Homo sapiens chromosome 18, clone hRPK.53... 42 1.6
15dbj|AP002472.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 1.6
16gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 6.2
17gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 6.2
18gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 6.2
19emb|CR388121.11| Zebrafish DNA sequence from clone DKEY-161F5 in... 40 6.2
20gb|AC083890.4| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 6.2
21gb|AC125329.4| Mus musculus BAC clone RP23-198F7 from 10, comple... 40 6.2
22gb|AC123074.2| Mus musculus BAC clone RP23-168H19 from 10, compl... 40 6.2
23gb|AC112146.3| Mus musculus BAC clone RP23-101G11 from 12, compl... 40 6.2
24gb|AC073318.8| Homo sapiens BAC clone RP11-266F12 from 7, comple... 40 6.2
25gb|AC087420.4| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 6.2
26gb|CP000001.1| Bacillus cereus E33L, complete genome 40 6.2
27emb|BX927062.11| Zebrafish DNA sequence from clone CH211-227N20 ... 40 6.2
28emb|AL356122.9| Human DNA sequence from clone RP11-61P22 on chro... 40 6.2
29emb|BX030623.1|CNS08VSJ Single read from an extremity of a full-... 40 6.2
30gb|AC022254.11| Homo sapiens chromosome 15, clone RP11-282M16, c... 40 6.2
31gb|AC083836.6| Homo sapiens, clone RP11-90D11, complete sequence 40 6.2
32gb|BC112843.1| Bos taurus cDNA clone MGC:137587 IMAGE:8163930, c... 40 6.2
33gb|AC009292.11| Homo sapiens chromosome 15, clone RP11-34F13, co... 40 6.2
34gb|AC092626.3| Homo sapiens BAC clone RP11-270G12 from 4, comple... 40 6.2
35gb|AC109518.6| Homo sapiens BAC clone RP11-492P11 from 4, comple... 40 6.2
36gb|AC024995.8| Homo sapiens, clone RP11-328L11, complete sequence 40 6.2
37dbj|AK046035.1| Mus musculus adult male corpora quadrigemina cDN... 40 6.2
38gb|AC073479.7| Homo sapiens BAC clone RP11-749J12 from 2, comple... 40 6.2
39gb|AC009225.4| Homo sapiens BAC clone RP11-156A1 from 2, complet... 40 6.2
40emb|AJ488502.1|SNO488502 Stagonospora nodorum transposon molly 40 6.2
41emb|CT009654.2| Medicago truncatula chromosome 5 clone mth2-17c1... 40 6.2
42emb|AL117355.5|CNS01DRL Human chromosome 14 DNA sequence BAC R-3... 40 6.2
43gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 6.2
44gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 6.2
45gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 6.2
46gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete ge... 40 6.2
47emb|AL139193.4|CNS01DXA Human chromosome 14 DNA sequence BAC R-6... 40 6.2
48dbj|AP004220.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.2 
>gb|AY145086.1| Aegilops tauschii rust-resistance protein Lr21 gene, complete cds
          Length = 4687

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 428  atgtgctttatcttaagccagtttggatctcct 460
            ||||||||||||||| |||||||||||||||||
Sbjct: 4051 atgtgctttatcttatgccagtttggatctcct 4019
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>gb|AF532104.1|AF532104S1 Aegilops tauschii strain TA1649 cosmid 69-7-1 Lr21 gene, complete cds;
             and unknown gene
          Length = 27960

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                              
Query: 428   atgtgctttatcttaagccagtttggatctcct 460
             ||||||||||||||| |||||||||||||||||
Sbjct: 19209 atgtgctttatcttatgccagtttggatctcct 19177
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>gb|AY139587.1| Triticum aestivum Lr21 gene, Lr21-R-S recombinant allele, partial
            sequence
          Length = 4735

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 428  atgtgctttatcttaagccagtttggatctcct 460
            ||||||||||||||| |||||||||||||||||
Sbjct: 4049 atgtgctttatcttatgccagtttggatctcct 4017
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>gb|AY139586.1| Triticum aestivum Lr21 gene, Lr21-S allele, partial sequence
          Length = 4832

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 428  atgtgctttatcttaagccagtttggatctcct 460
            ||||||||||||||| |||||||||||||||||
Sbjct: 4146 atgtgctttatcttatgccagtttggatctcct 4114
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>gb|AC104619.5| Homo sapiens BAC clone RP11-192C21 from 4, complete sequence
          Length = 187749

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 115   cttaataataaatatatgtgacatgtt 141
             |||||||||||||||||||| ||||||
Sbjct: 24296 cttaataataaatatatgtgtcatgtt 24270



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 166   taataataaatatatgtgacatgtt 190
             |||||||||||||||||| ||||||
Sbjct: 24294 taataataaatatatgtgtcatgtt 24270



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 68    taataataaatatatgtgacatgtt 92
             |||||||||||||||||| ||||||
Sbjct: 24294 taataataaatatatgtgtcatgtt 24270



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 19    taataataaatatatgtgacatgtt 43
             |||||||||||||||||| ||||||
Sbjct: 24294 taataataaatatatgtgtcatgtt 24270
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>gb|AC158412.4| Cercopithecus aethiops clone CH252-436N4, complete sequence
          Length = 213834

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 295   tgcccaagcaggaaaggcatgccaag 320
             ||||||||||||||||||| ||||||
Sbjct: 15359 tgcccaagcaggaaaggcaagccaag 15384
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>gb|AE014830.1| Plasmodium falciparum 3D7 chromosome 10 section 2 of 7 of the complete
              sequence
          Length = 250029

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243810 atatttgacatgtttgaaatatttga 243785



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243792 atatttgacatgtttgaaatatttga 243767



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243774 atatttgacatgtttgaaatatttga 243749



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243756 atatttgacatgtttgaaatatttga 243731



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243738 atatttgacatgtttgaaatatttga 243713



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243720 atatttgacatgtttgaaatatttga 243695



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243702 atatttgacatgtttgaaatatttga 243677



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243684 atatttgacatgtttgaaatatttga 243659



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243666 atatttgacatgtttgaaatatttga 243641



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243648 atatttgacatgtttgaaatatttga 243623



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243630 atatttgacatgtttgaaatatttga 243605



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243612 atatttgacatgtttgaaatatttga 243587



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243594 atatttgacatgtttgaaatatttga 243569



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243576 atatttgacatgtttgaaatatttga 243551



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243558 atatttgacatgtttgaaatatttga 243533



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243540 atatttgacatgtttgaaatatttga 243515



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243522 atatttgacatgtttgaaatatttga 243497



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243504 atatttgacatgtttgaaatatttga 243479



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243486 atatttgacatgtttgaaatatttga 243461



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243468 atatttgacatgtttgaaatatttga 243443



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243450 atatttgacatgtttgaaatatttga 243425



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    atatgtgacatgtttgaaatatttga 202
              |||| |||||||||||||||||||||
Sbjct: 243432 atatttgacatgtttgaaatatttga 243407



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 175    atatatgtgacatgtttgaaatatttga 202
              |||||| |||||| ||||||||||||||
Sbjct: 243398 atatatttgacatatttgaaatatttga 243371
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>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold
          Length = 1825024

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 295   tgcccaagcaggaaaggcatgccaag 320
             ||||||||||||||||||| ||||||
Sbjct: 15359 tgcccaagcaggaaaggcaagccaag 15384
to top
>gb|AC124193.2| Mus musculus BAC clone RP23-277F3 from 16, complete sequence
          Length = 190347

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 110    acaatcttaataataaatata 130
              |||||||||||||||||||||
Sbjct: 131714 acaatcttaataataaatata 131694
to top
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020
          Length = 1824958

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 374   cagcaaagaggagggttacag 394
             |||||||||||||||||||||
Sbjct: 27698 cagcaaagaggagggttacag 27678
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>gb|AC068327.14| Homo sapiens chromosome 15, clone RP11-394G8, complete sequence
          Length = 177539

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 180    tgtgacatgtttgaaatattt 200
              |||||||||||||||||||||
Sbjct: 137587 tgtgacatgtttgaaatattt 137567
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>gb|AC026583.10| Homo sapiens chromosome 15, clone RP11-20C17, complete sequence
          Length = 175472

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 180   tgtgacatgtttgaaatattt 200
             |||||||||||||||||||||
Sbjct: 16469 tgtgacatgtttgaaatattt 16449
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>gb|AC154770.2| Mus musculus BAC clone RP24-448C20 from chromosome 16, complete
             sequence
          Length = 196851

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 110   acaatcttaataataaatata 130
             |||||||||||||||||||||
Sbjct: 14525 acaatcttaataataaatata 14505
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>gb|AC006211.1|AC006211 Homo sapiens chromosome 18, clone hRPK.537_E_1, complete sequence
          Length = 217421

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 335    tgaacaagcacaatcagagtt 355
              |||||||||||||||||||||
Sbjct: 158205 tgaacaagcacaatcagagtt 158225
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>dbj|AP002472.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-710M11, complete
             sequence
          Length = 109000

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 335   tgaacaagcacaatcagagtt 355
             |||||||||||||||||||||
Sbjct: 20979 tgaacaagcacaatcagagtt 20959
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    cctaataataaatatatgtg 183
              ||||||||||||||||||||
Sbjct: 703466 cctaataataaatatatgtg 703485



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     cctaataataaatatatgtg 85
              ||||||||||||||||||||
Sbjct: 703466 cctaataataaatatatgtg 703485



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     cctaataataaatatatgtg 36
              ||||||||||||||||||||
Sbjct: 703466 cctaataataaatatatgtg 703485
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    cctaataataaatatatgtg 183
              ||||||||||||||||||||
Sbjct: 712583 cctaataataaatatatgtg 712602



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     cctaataataaatatatgtg 85
              ||||||||||||||||||||
Sbjct: 712583 cctaataataaatatatgtg 712602



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     cctaataataaatatatgtg 36
              ||||||||||||||||||||
Sbjct: 712583 cctaataataaatatatgtg 712602
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     cctaataataaatatatgtg 85
              ||||||||||||||||||||
Sbjct: 712478 cctaataataaatatatgtg 712497



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    cctaataataaatatatgtg 183
              ||||||||||||||||||||
Sbjct: 712478 cctaataataaatatatgtg 712497



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     cctaataataaatatatgtg 36
              ||||||||||||||||||||
Sbjct: 712478 cctaataataaatatatgtg 712497
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>emb|CR388121.11| Zebrafish DNA sequence from clone DKEY-161F5 in linkage group 15,
              complete sequence
          Length = 179357

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 401    aagcatggtttaaaatcctt 420
              ||||||||||||||||||||
Sbjct: 171221 aagcatggtttaaaatcctt 171202
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>gb|AC083890.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-284P20, complete
            sequence
          Length = 203967

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 364  aaaaacaaggcagcaaagaggagg 387
            |||||||||||| |||||||||||
Sbjct: 1773 aaaaacaaggcatcaaagaggagg 1796
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>gb|AC125329.4| Mus musculus BAC clone RP23-198F7 from 10, complete sequence
          Length = 211931

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 405    atggtttaaaatccttcatg 424
              ||||||||||||||||||||
Sbjct: 200509 atggtttaaaatccttcatg 200528
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>gb|AC123074.2| Mus musculus BAC clone RP23-168H19 from 10, complete sequence
          Length = 210189

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 405    atggtttaaaatccttcatg 424
              ||||||||||||||||||||
Sbjct: 187229 atggtttaaaatccttcatg 187210
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>gb|AC112146.3| Mus musculus BAC clone RP23-101G11 from 12, complete sequence
          Length = 188819

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 267   aactgctccttccttccctt 286
             ||||||||||||||||||||
Sbjct: 77933 aactgctccttccttccctt 77914
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>gb|AC073318.8| Homo sapiens BAC clone RP11-266F12 from 7, complete sequence
          Length = 162460

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/31 (93%), Gaps = 2/31 (6%)
 Strand = Plus / Plus

                                             
Query: 27     aatatatgtgac--atgtttgaaatagttga 55
              ||||||||||||  |||||||||||||||||
Sbjct: 119320 aatatatgtgacccatgtttgaaatagttga 119350



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/31 (93%), Gaps = 2/31 (6%)
 Strand = Plus / Plus

                                             
Query: 76     aatatatgtgac--atgtttgaaatagttga 104
              ||||||||||||  |||||||||||||||||
Sbjct: 119320 aatatatgtgacccatgtttgaaatagttga 119350



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/31 (93%), Gaps = 2/31 (6%)
 Strand = Plus / Plus

                                             
Query: 125    aatatatgtgac--atgtttgaaatagttga 153
              ||||||||||||  |||||||||||||||||
Sbjct: 119320 aatatatgtgacccatgtttgaaatagttga 119350
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>gb|AC087420.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-314O1, complete
              sequence
          Length = 232462

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 364    aaaaacaaggcagcaaagaggagg 387
              |||||||||||| |||||||||||
Sbjct: 226448 aaaaacaaggcatcaaagaggagg 226471
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     cctaataataaatatatgtg 36
              ||||||||||||||||||||
Sbjct: 702486 cctaataataaatatatgtg 702505



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    cctaataataaatatatgtg 183
              ||||||||||||||||||||
Sbjct: 702486 cctaataataaatatatgtg 702505



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     cctaataataaatatatgtg 85
              ||||||||||||||||||||
Sbjct: 702486 cctaataataaatatatgtg 702505
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>emb|BX927062.11| Zebrafish DNA sequence from clone CH211-227N20 in linkage group 13,
             complete sequence
          Length = 154186

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   gaagtgctgaacaagcacaa 347
             ||||||||||||||||||||
Sbjct: 29082 gaagtgctgaacaagcacaa 29063
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>emb|AL356122.9| Human DNA sequence from clone RP11-61P22 on chromosome 6 Contains part
             of the RNAH gene for an RNA helicase, complete sequence
          Length = 72855

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   catggtttaaaatccttcat 423
             ||||||||||||||||||||
Sbjct: 70470 catggtttaaaatccttcat 70489
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>emb|BX030623.1|CNS08VSJ Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA45DA09 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 862

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 358 caacggaaaaacaaggcagcaaag 381
           ||||| ||||||||||||||||||
Sbjct: 37  caacgaaaaaacaaggcagcaaag 60
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>gb|AC022254.11| Homo sapiens chromosome 15, clone RP11-282M16, complete sequence
          Length = 188601

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 364    aaaaacaaggcagcaaagaggagg 387
              ||||| ||||||||||||||||||
Sbjct: 171141 aaaaaaaaggcagcaaagaggagg 171164
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>gb|AC083836.6| Homo sapiens, clone RP11-90D11, complete sequence
          Length = 173428

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    ctgctccttccttcccttca 288
              ||||||||||||||||||||
Sbjct: 123435 ctgctccttccttcccttca 123416
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>gb|BC112843.1| Bos taurus cDNA clone MGC:137587 IMAGE:8163930, complete cds
          Length = 1353

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 267 aactgctccttccttccctt 286
           ||||||||||||||||||||
Sbjct: 220 aactgctccttccttccctt 239
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>gb|AC009292.11| Homo sapiens chromosome 15, clone RP11-34F13, complete sequence
          Length = 182855

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 364    aaaaacaaggcagcaaagaggagg 387
              ||||| ||||||||||||||||||
Sbjct: 125978 aaaaaaaaggcagcaaagaggagg 125955
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>gb|AC092626.3| Homo sapiens BAC clone RP11-270G12 from 4, complete sequence
          Length = 81480

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   actgctccttccttcccttc 287
             ||||||||||||||||||||
Sbjct: 62742 actgctccttccttcccttc 62723
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>gb|AC109518.6| Homo sapiens BAC clone RP11-492P11 from 4, complete sequence
          Length = 172189

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   acatgtttgaaatatttgaa 203
             ||||||||||||||||||||
Sbjct: 72828 acatgtttgaaatatttgaa 72847
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>gb|AC024995.8| Homo sapiens, clone RP11-328L11, complete sequence
          Length = 171873

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   ctgctccttccttcccttca 288
             ||||||||||||||||||||
Sbjct: 23987 ctgctccttccttcccttca 23968
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>dbj|AK046035.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230337A22 product:HYPOTHETICAL
            21.0 KDA PROTEIN homolog [Homo sapiens], full insert
            sequence
          Length = 3434

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 364  aaaaacaaggcagcaaagaggagg 387
            |||||||||||| |||||||||||
Sbjct: 1481 aaaaacaaggcatcaaagaggagg 1458
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>gb|AC073479.7| Homo sapiens BAC clone RP11-749J12 from 2, complete sequence
          Length = 196671

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   acaatcctaataataaatat 178
             ||||||||||||||||||||
Sbjct: 90988 acaatcctaataataaatat 90969



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    acaatcctaataataaatat 80
             ||||||||||||||||||||
Sbjct: 90988 acaatcctaataataaatat 90969



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    acaatcctaataataaatat 31
             ||||||||||||||||||||
Sbjct: 90988 acaatcctaataataaatat 90969
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>gb|AC009225.4| Homo sapiens BAC clone RP11-156A1 from 2, complete sequence
          Length = 163352

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 181   gtgacatgtttgaaatatttgaag 204
             ||||||||||||||||||| ||||
Sbjct: 44646 gtgacatgtttgaaatattagaag 44669
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>emb|AJ488502.1|SNO488502 Stagonospora nodorum transposon molly
          Length = 1866

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 377 caaagaggagggttacaggc 396
           ||||||||||||||||||||
Sbjct: 886 caaagaggagggttacaggc 905
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>emb|CT009654.2| Medicago truncatula chromosome 5 clone mth2-17c15, COMPLETE SEQUENCE
          Length = 126536

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    aataaatatatgtgacatgt 42
             ||||||||||||||||||||
Sbjct: 52358 aataaatatatgtgacatgt 52377



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    aataaatatatgtgacatgt 91
             ||||||||||||||||||||
Sbjct: 52358 aataaatatatgtgacatgt 52377



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   aataaatatatgtgacatgt 140
             ||||||||||||||||||||
Sbjct: 52358 aataaatatatgtgacatgt 52377



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   aataaatatatgtgacatgt 189
             ||||||||||||||||||||
Sbjct: 52358 aataaatatatgtgacatgt 52377
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>emb|AL117355.5|CNS01DRL Human chromosome 14 DNA sequence BAC R-354E14 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174933

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   caatcttaataataaatata 130
             ||||||||||||||||||||
Sbjct: 98592 caatcttaataataaatata 98611
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     cctaataataaatatatgtg 85
              ||||||||||||||||||||
Sbjct: 687912 cctaataataaatatatgtg 687931



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     cctaataataaatatatgtg 36
              ||||||||||||||||||||
Sbjct: 687912 cctaataataaatatatgtg 687931



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    cctaataataaatatatgtg 183
              ||||||||||||||||||||
Sbjct: 687912 cctaataataaatatatgtg 687931
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    cctaataataaatatatgtg 183
              ||||||||||||||||||||
Sbjct: 712582 cctaataataaatatatgtg 712601



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     cctaataataaatatatgtg 85
              ||||||||||||||||||||
Sbjct: 712582 cctaataataaatatatgtg 712601



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     cctaataataaatatatgtg 36
              ||||||||||||||||||||
Sbjct: 712582 cctaataataaatatatgtg 712601
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     cctaataataaatatatgtg 85
              ||||||||||||||||||||
Sbjct: 787638 cctaataataaatatatgtg 787657



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     cctaataataaatatatgtg 36
              ||||||||||||||||||||
Sbjct: 787638 cctaataataaatatatgtg 787657



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    cctaataataaatatatgtg 183
              ||||||||||||||||||||
Sbjct: 787638 cctaataataaatatatgtg 787657
to top
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome
          Length = 1664970

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 112     aatcttaataataaatatat 131
               ||||||||||||||||||||
Sbjct: 1308854 aatcttaataataaatatat 1308873
to top
>emb|AL139193.4|CNS01DXA Human chromosome 14 DNA sequence BAC R-661G16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 162691

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    ataataaatatatgtgacat 138
              ||||||||||||||||||||
Sbjct: 136687 ataataaatatatgtgacat 136668



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 168    ataataaatatatgtgacat 187
              ||||||||||||||||||||
Sbjct: 136687 ataataaatatatgtgacat 136668



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     ataataaatatatgtgacat 89
              ||||||||||||||||||||
Sbjct: 136687 ataataaatatatgtgacat 136668



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     ataataaatatatgtgacat 40
              ||||||||||||||||||||
Sbjct: 136687 ataataaatatatgtgacat 136668



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 168    ataataaatatatgtgacat 187
              ||||||||||||||||||||
Sbjct: 136293 ataataaatatatgtgacat 136274



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     ataataaatatatgtgacat 40
              ||||||||||||||||||||
Sbjct: 136293 ataataaatatatgtgacat 136274



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     ataataaatatatgtgacat 89
              ||||||||||||||||||||
Sbjct: 136293 ataataaatatatgtgacat 136274



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    ataataaatatatgtgacat 138
              ||||||||||||||||||||
Sbjct: 136293 ataataaatatatgtgacat 136274



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     ataataaatatatgtgacat 40
              ||||||||||||||||||||
Sbjct: 136258 ataataaatatatgtgacat 136239



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    ataataaatatatgtgacat 138
              ||||||||||||||||||||
Sbjct: 136258 ataataaatatatgtgacat 136239



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 168    ataataaatatatgtgacat 187
              ||||||||||||||||||||
Sbjct: 136258 ataataaatatatgtgacat 136239



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     ataataaatatatgtgacat 89
              ||||||||||||||||||||
Sbjct: 136258 ataataaatatatgtgacat 136239



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     ataataaatatatgtgacat 89
              ||||||||||||||||||||
Sbjct: 136002 ataataaatatatgtgacat 135983



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 168    ataataaatatatgtgacat 187
              ||||||||||||||||||||
Sbjct: 136002 ataataaatatatgtgacat 135983



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    ataataaatatatgtgacat 138
              ||||||||||||||||||||
Sbjct: 136002 ataataaatatatgtgacat 135983



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     ataataaatatatgtgacat 40
              ||||||||||||||||||||
Sbjct: 136002 ataataaatatatgtgacat 135983
to top
>dbj|AP004220.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1483D9
          Length = 162604

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   ctgctccttccttcccttca 288
             ||||||||||||||||||||
Sbjct: 44994 ctgctccttccttcccttca 45013


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,330,068
Number of Sequences: 3902068
Number of extensions: 7330068
Number of successful extensions: 172227
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 171532
Number of HSP's gapped (non-prelim): 696
length of query: 460
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 438
effective length of database: 17,147,199,772
effective search space: 7510473500136
effective search space used: 7510473500136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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