>PHOSP_NDVB (P24698) Phosphoprotein (Protein P)|
          Length = 395

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 199 TNPTKMLLLLLPKFSEKSMKAQAGQWSPP 285
           T  +  LLL+L K S KS  A+ G WS P
Sbjct: 111 TGASNSLLLMLDKLSNKSSNAKKGLWSSP 139

>TFB3_SCHPO (O94684) RNA polymerase II transcription factor B subunit 3 (RNA|
           polymerase II transcription factor B p38 subunit) (RNA
           polymerase II transcription factor B 38 kDa subunit)
           (CDK-activating kinase assembly factor MAT1 homolog)
           (RING finger prot
          Length = 318

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
 Frame = +2

Query: 173 RLLLPDYQQPIQPKCYSYFCQNSRKRA*KHRQGSGPLPTDNQTMNDD--RRLTWRSRITE 346
           R L P+ +  I P+CY   C++   R         P P  N+ +     R  T+     E
Sbjct: 20  RYLNPNMKLLINPECYHKMCESCVDRIFTTGPAQCPTPGCNKILRKAKFREQTFEDAQIE 79

Query: 347 RHPSVRRRLS 376
           R   VR+R+S
Sbjct: 80  REVDVRKRIS 89

>LBD13_ARATH (Q9AT61) LOB domain protein 13|
          Length = 268

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
 Frame = +3

Query: 42  LSD*TYSCQDALSSVTVTVTLLDAETTS------KHAYATHR*G*RRQCKGCFCQITSNQ 203
           L D  Y C  A+S++   +  L +E T+      +H Y                 ITS Q
Sbjct: 120 LRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEAT------------TITSLQ 167

Query: 204 SNQNATPTSAKILGKEHESTGRAVVPSP 287
           +N N+T T++ +   +H      ++P P
Sbjct: 168 NNFNSTTTTSSVSCDQHALASAILLPPP 195

>MSA2_PLAFF (P19599) Merozoite surface antigen 2 precursor (MSA-2) (Merozoite|
           45 kDa surface antigen) (AG513)
          Length = 264

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 21/73 (28%), Positives = 34/73 (46%)
 Frame = +3

Query: 78  SSVTVTVTLLDAETTSKHAYATHR*G*RRQCKGCFCQITSNQSNQNATPTSAKILGKEHE 257
           S+ T T    +++TT+  A  T   G +R         T+N  +Q  TPT+A     +  
Sbjct: 73  SASTSTTNNGESQTTTPTAADTIASGSQRSTNSASTSTTNNGESQTTTPTAA-----DTP 127

Query: 258 STGRAVVPSPLIT 296
           +   ++ PSP IT
Sbjct: 128 TATESISPSPPIT 140

>MSA2_PLAFJ (P50499) Merozoite surface antigen 2 precursor (MSA-2)|
          Length = 264

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 22/73 (30%), Positives = 34/73 (46%)
 Frame = +3

Query: 78  SSVTVTVTLLDAETTSKHAYATHR*G*RRQCKGCFCQITSNQSNQNATPTSAKILGKEHE 257
           S+ T T    +++TT+  A  T   G +R         T+N  +Q  TPT+A     +  
Sbjct: 73  SASTSTTNNGESQTTTPTAADTIASGSQRSTNSASTSTTNNGESQTTTPTAA-----DTP 127

Query: 258 STGRAVVPSPLIT 296
           +T  +  PSP IT
Sbjct: 128 TTTESNSPSPPIT 140

>PP14_ARATH (P48484) Serine/threonine-protein phosphatase PP1 isozyme 4 (EC|
           3.1.3.16)
          Length = 321

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +2

Query: 314 RRLTWRSRITERHPSVRRRLSTRTTKELCTAAHDIFVQ 427
           RRLT    +    P  + +LS    K+LCT A DIF+Q
Sbjct: 24  RRLT---EVRLARPGKQVQLSEAEIKQLCTTARDIFLQ 58

>HSP7C_BRARE (Q90473) Heat shock cognate 71 kDa protein (Heat shock 70 kDa|
           protein 8)
          Length = 649

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +3

Query: 249 EHESTGRAVVPSPLITKL*TTIGG*HGGQ-ELQKGTHPSEGAFP 377
           EH+      V +P+ITKL  + GG  GG  E   G  P  GA P
Sbjct: 593 EHQQKELEKVCNPIITKLYQSAGGMPGGMPEGMPGGFPGAGAAP 636

>RP43_RIFPA (Q9NH13) Exoskeleton protein RP43 precursor|
          Length = 421

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 208 LDWLLVIWQKQPLHCRRH 155
           + ++ V WQ  P+HCR+H
Sbjct: 10  VSFMFVTWQTNPVHCRQH 27


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,762,842
Number of Sequences: 219361
Number of extensions: 1280897
Number of successful extensions: 3644
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3643
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)